BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003327
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   188   1e-45
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   183   5e-44
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      180   4e-43
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      180   4e-43
ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|2...   169   9e-40

>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  188 bits (478), Expect = 1e-45
 Identities = 114/201 (56%), Positives = 140/201 (69%), Gaps = 5/201 (2%)
 Frame = -3

Query: 809 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLS- 633
           MA+TIAT AML+AKC+S + SP  ++ S+PT KP+S+L +Q L K  TT KSSEN NLS 
Sbjct: 1   MAATIATMAMLNAKCLSIN-SPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLST 59

Query: 632 SLTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXLYNILQPAL 453
           SL GTA+AGA+FSTLSSC PA AAQQIA+IA+GDNRG              L+NILQPAL
Sbjct: 60  SLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPAL 119

Query: 452 NQINKMNSTKGVIVXXXXXXLA---YVSAPTASASEVAMIAE-ASSDNRGXXXXXXXXXX 285
           NQ+NKM STKGVI+      LA   ++  P ASASE+A +A+ ASSDNRG          
Sbjct: 120 NQLNKMRSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPA 179

Query: 284 XXXXLFNILQPALNQIDRMKS 222
               L+NILQPALNQ++RM+S
Sbjct: 180 ILWVLYNILQPALNQLNRMRS 200


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  183 bits (465), Expect = 5e-44
 Identities = 107/199 (53%), Positives = 139/199 (69%), Gaps = 3/199 (1%)
 Frame = -3

Query: 809 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 630
           MA+T+AT A+L+AKC+S +++ N +  ++P+ KPVS+L +Q L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSNKN-ISPTKPSTKPVSLLSMQNLPKGLTISKPADN---TV 56

Query: 629 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXLYNILQPALN 450
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG              L+NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALN 116

Query: 449 QINKMNSTKGVIVXXXXXXLA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 279
           QIN+M  TKGVIV      LA   ++S P ASASE+AMIA+A+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAIL 176

Query: 278 XXLFNILQPALNQIDRMKS 222
             L+NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  180 bits (457), Expect = 4e-43
 Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
 Frame = -3

Query: 809 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 630
           MA+T+AT A+L+AKC+S ++  N +   +P+ KPVS+L +  L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56

Query: 629 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXLYNILQPALN 450
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG              L+NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 449 QINKMNSTKGVIVXXXXXXLA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 279
           QIN+M  TKGVIV      LA   ++S P ASASE+AMIAEA+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVVAPAIL 176

Query: 278 XXLFNILQPALNQIDRMKS 222
             L+NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  180 bits (457), Expect = 4e-43
 Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
 Frame = -3

Query: 809 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSS 630
           MA+T+AT A+L+AKC+S ++  N +   +P+ KPVS+L +  L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56

Query: 629 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXLYNILQPALN 450
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG              L+NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 449 QINKMNSTKGVIVXXXXXXLA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXX 279
           QIN+M  TKGVIV      LA   ++S P ASASE+AMIAEA+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVVAPAIL 176

Query: 278 XXLFNILQPALNQIDRMKS 222
             L+NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|222852470|gb|EEE90017.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  169 bits (428), Expect = 9e-40
 Identities = 99/194 (51%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
 Frame = -3

Query: 794 ATTAMLSAKCVSSSTSPNRVHSSRPTIKPVSVLPLQALQKVSTTSKSSENFNLSSLTGTA 615
           AT A+L+AKC+S + + N  +  +P  KP+ +L +Q L K  T SK ++N   ++L GTA
Sbjct: 3   ATMAILNAKCLSINANKN-TNPIKPPTKPIYLLAMQNLPKGLTISKPADN---TALAGTA 58

Query: 614 LAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXLYNILQPALNQINKM 435
           +AGA+F+TLSSC PAFAAQQIA+IAEGDNRG              L+NILQPALNQ+N+M
Sbjct: 59  IAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRM 118

Query: 434 NSTKGVIVXXXXXXLA---YVSAPTASASEVAMIAEASSDNRGXXXXXXXXXXXXXXLFN 264
             T+GVI+      LA   ++S P ASASE+AMIAEA+SD+RG              L+N
Sbjct: 119 RETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYN 178

Query: 263 ILQPALNQIDRMKS 222
           ILQPALNQI+RM+S
Sbjct: 179 ILQPALNQINRMRS 192