BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003293
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]                    207   1e-73
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   207   4e-73
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   207   4e-73
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   207   4e-73
gb|AEN19689.1| beta-tubulin [Cymbidium faberi]                        207   4e-73

>gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]
          Length = 444

 Score =  207 bits (527), Expect(2) = 1e-73
 Identities = 112/174 (64%), Positives = 112/174 (64%)
 Frame = +1

Query: 1   DSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLXXXXXXXX 180
           DSVLDVVRKEAENCDCLQGFQVCH              ISKIREEYPDRMML        
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADECMVLDNEALYDICFRT 360
                                                   NADECMVLDNEALYDICFRT
Sbjct: 174 KVSDTVVEPYNATLSVHQLVE-------------------NADECMVLDNEALYDICFRT 214

Query: 361 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 522
           LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 215 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268



 Score = 95.5 bits (236), Expect(2) = 1e-73
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 582 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 713
           RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 305


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  207 bits (526), Expect(2) = 4e-73
 Identities = 111/174 (63%), Positives = 112/174 (64%)
 Frame = +1

Query: 1   DSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLXXXXXXXX 180
           DSVLDVVRKEAENCDCLQGFQ+CH              ISKIREEYPDRMML        
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADECMVLDNEALYDICFRT 360
                                                   NADECMVLDNEALYDICFRT
Sbjct: 174 KVSDTVVEPYNATLSVHQLVE-------------------NADECMVLDNEALYDICFRT 214

Query: 361 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 522
           LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 215 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268



 Score = 94.4 bits (233), Expect(2) = 4e-73
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 582 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 713
           RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMMCAADP
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADP 305


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  207 bits (526), Expect(2) = 4e-73
 Identities = 111/174 (63%), Positives = 112/174 (64%)
 Frame = +1

Query: 1   DSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLXXXXXXXX 180
           DSVLDVVRKEAENCDCLQGFQ+CH              ISKIREEYPDRMML        
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADECMVLDNEALYDICFRT 360
                                                   NADECMVLDNEALYDICFRT
Sbjct: 174 KVSDTVVEPYNATLSVHQLVE-------------------NADECMVLDNEALYDICFRT 214

Query: 361 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 522
           LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 215 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268



 Score = 94.4 bits (233), Expect(2) = 4e-73
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 582 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 713
           RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMMCAADP
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADP 305


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  207 bits (526), Expect(2) = 4e-73
 Identities = 111/174 (63%), Positives = 112/174 (64%)
 Frame = +1

Query: 1   DSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLXXXXXXXX 180
           DSVLDVVRKEAENCDCLQGFQ+CH              ISKIREEYPDRMML        
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADECMVLDNEALYDICFRT 360
                                                   NADECMVLDNEALYDICFRT
Sbjct: 174 KVSDTVVEPYNATLSVHQLVE-------------------NADECMVLDNEALYDICFRT 214

Query: 361 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 522
           LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 215 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268



 Score = 94.4 bits (233), Expect(2) = 4e-73
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 582 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 713
           RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMMCAADP
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADP 305


>gb|AEN19689.1| beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  207 bits (526), Expect(2) = 4e-73
 Identities = 111/174 (63%), Positives = 112/174 (64%)
 Frame = +1

Query: 1   DSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLXXXXXXXX 180
           DSVLDVVRKEAENCDCLQGFQ+CH              ISKIREEYPDRMML        
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 173

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADECMVLDNEALYDICFRT 360
                                                   NADECMVLDNEALYDICFRT
Sbjct: 174 KVSDTVVEPYNATLSVHQLVE-------------------NADECMVLDNEALYDICFRT 214

Query: 361 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 522
           LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 215 LKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268



 Score = 94.4 bits (233), Expect(2) = 4e-73
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 582 RLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 713
           RLHFFMVGF+PLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP
Sbjct: 262 RLHFFMVGFSPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADP 305