BLASTX nr result

ID: Coptis24_contig00003291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003291
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36394.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...   132   2e-29
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   131   5e-29
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   130   1e-28
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   128   6e-28

>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  133 bits (334), Expect = 2e-29
 Identities = 79/166 (47%), Positives = 108/166 (65%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   VGVEYFDALAMRSFFQDFEKDDDGNIVECKMHDLVHDFAESLTKTDCSVL-VNNEKISS- 175
           VG  YF+ LA RSFFQDFEK DDGNI+ CKMHD+VHDFA+ LT+ +C ++ V+N+++ S 
Sbjct: 148 VGRTYFEYLAARSFFQDFEKYDDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESI 207

Query: 176 ----DKIRHLTVDDVEN----PSIYEAKKLRTLVVGKASPPALHASRSVPSALHQLTCLR 331
                KIRH T+   E+     S Y  K L TL+  +A    +   +++P+ L  LTCL+
Sbjct: 208 DLSFKKIRHTTLVVRESTPNFTSTYNMKNLHTLLAKEAFNSRVF--KALPNLLRHLTCLK 265

Query: 332 TLDLSGEHLFSNSVFEVLPSEVSRLLHLRYLDLSY-TRVKELPETV 466
            LDLS     SN + E LP EV +L+HLRYL+LS    ++ELPET+
Sbjct: 266 ALDLS-----SNQLIEELPREVGKLIHLRYLNLSLCLSLRELPETI 306


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/166 (46%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   VGVEYFDALAMRSFFQDFEKDDDGNIVECKMHDLVHDFAESLTKTDCSVL-VNNEKISS- 175
           +G  YF+ LA RSFFQDFEKD DGNI+ CKMHD+VHDFA+ LT+ +C ++ V+N+++ S 
Sbjct: 444 IGRTYFEYLAARSFFQDFEKDTDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESI 503

Query: 176 ----DKIRHLTVDDVENP----SIYEAKKLRTLVVGKASPPALHASRSVPSALHQLTCLR 331
                KIRH+T+   E+     S Y  K L TL+  +A   ++    ++P+ L  LTCLR
Sbjct: 504 DLSFKKIRHITLVVRESTPNFVSTYNMKNLHTLLAKEAFKSSVLV--ALPNLLRHLTCLR 561

Query: 332 TLDLSGEHLFSNSVFEVLPSEVSRLLHLRYLDLS-YTRVKELPETV 466
            LDLS     SN + E LP EV +L+HLR+L+LS    ++ELPET+
Sbjct: 562 ALDLS-----SNQLIEELPKEVGKLIHLRFLNLSGCFWLRELPETI 602


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score =  131 bits (330), Expect = 5e-29
 Identities = 82/166 (49%), Positives = 102/166 (61%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   VGVEYFDALAMRSFFQDFEKDDDGNIVECKMHDLVHDFAESLTKTDCSVL-VNNEKISS- 175
           VG  YF+ LA RSFFQDFEKDDDGNI+ CKMHD+VHDFA+ LT  +C ++ V+N+K  S 
Sbjct: 467 VGRTYFEYLAARSFFQDFEKDDDGNIIHCKMHDIVHDFAQFLTLNECFIVEVDNQKKGSM 526

Query: 176 ----DKIRHLTVDDVEN----PSIYEAKKLRTLVVGKASPPALHASRSVPSALHQLTCLR 331
                KIRH T+   E+     S    K L TL+  +A          V  AL  LTCLR
Sbjct: 527 DLFFQKIRHATLVVRESTPNFASTCNMKNLHTLLAKRA------FDSRVLEALGHLTCLR 580

Query: 332 TLDLSGEHLFSNSVFEVLPSEVSRLLHLRYLDLSY-TRVKELPETV 466
            LDL      SN + E LP EV +L+HLRYL+LSY   ++ELPET+
Sbjct: 581 ALDLR-----SNQLIEELPKEVGKLIHLRYLNLSYCDSLRELPETI 621


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  130 bits (327), Expect = 1e-28
 Identities = 82/166 (49%), Positives = 102/166 (61%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   VGVEYFDALAMRSFFQDFEKDDDGNIVECKMHDLVHDFAESLTKTDCSVL-VNNEKISS- 175
           VG  YF+ LA RSFFQDFEKDDDGNI+ CKMHD+VHDFA+ LT+ +C ++ V+N+K  S 
Sbjct: 466 VGRTYFEYLAARSFFQDFEKDDDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSM 525

Query: 176 ----DKIRHLTVDDVEN----PSIYEAKKLRTLVVGKASPPALHASRSVPSALHQLTCLR 331
                KIRH T+   E+     S    K L TL+  KA          V  AL  LTCLR
Sbjct: 526 DLFFQKIRHATLVVRESTPNFASTCNMKNLHTLLAKKA------FDSRVLEALGNLTCLR 579

Query: 332 TLDLSGEHLFSNSVFEVLPSEVSRLLHLRYLDLSYT-RVKELPETV 466
            LDLS      N + E LP EV +L+HLRYL+LS    ++ELPET+
Sbjct: 580 ALDLS-----RNRLIEELPKEVGKLIHLRYLNLSLCYSLRELPETI 620


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  128 bits (321), Expect = 6e-28
 Identities = 80/166 (48%), Positives = 103/166 (62%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   VGVEYFDALAMRSFFQDFEKDDDGNIVECKMHDLVHDFAESLTKTDCSVL-VNNEKISS- 175
           VG  YF+ LA RSFFQDFEKDDDGNI+ CKMHD+VHDFA+ LT+ +C ++ V+N+K  S 
Sbjct: 466 VGRTYFEYLAARSFFQDFEKDDDGNIICCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSM 525

Query: 176 ----DKIRHLTVDDVEN----PSIYEAKKLRTLVVGKASPPALHASRSVPSALHQLTCLR 331
                KIRH T+   E+     S    K L TL + K          ++ + L  LTCLR
Sbjct: 526 DLFFQKIRHATLVVRESTPNFASTCNMKNLHTL-LAKEEFBISXVLEALXNLLRHLTCLR 584

Query: 332 TLDLSGEHLFSNSVFEVLPSEVSRLLHLRYLDLSYT-RVKELPETV 466
            LDLS      N + E LP EV +L+HLRYL+LS   R++ELPET+
Sbjct: 585 ALDLS-----RNRLIEELPKEVGKLIHLRYLNLSLCYRLRELPETI 625


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