BLASTX nr result

ID: Coptis24_contig00003280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003280
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526178.1| conserved hypothetical protein [Ricinus comm...   277   3e-72
ref|XP_004150723.1| PREDICTED: bidirectional sugar transporter S...   272   1e-70
ref|XP_003523404.1| PREDICTED: bidirectional sugar transporter S...   266   1e-68
ref|XP_003526670.1| PREDICTED: bidirectional sugar transporter S...   264   3e-68
ref|NP_564140.1| Nodulin MtN3-like protein [Arabidopsis thaliana...   263   9e-68

>ref|XP_002526178.1| conserved hypothetical protein [Ricinus communis]
            gi|223534555|gb|EEF36254.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 248

 Score =  277 bits (709), Expect = 3e-72
 Identities = 140/212 (66%), Positives = 161/212 (75%)
 Frame = -2

Query: 1047 PVITFRRIVRSKSTEQFSGVPYVMTLLNCLLSAWYGLPFVSPHNILVSTINFTGATIESI 868
            P ITF+RI++SKSTEQFSG+PYVMTLLNCLLSAWYGLPFVS +N+LVSTIN TGA IE+I
Sbjct: 23   PTITFKRIIKSKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSKNNLLVSTINGTGAVIETI 82

Query: 867  YVVMFIIYAPRRVKVRMGMXXXXXXXXXXXXXXXXXXXLDGQTRKLFCGFAATIFSIVMY 688
            YV++FIIYAPRR K ++                     L G TRKLFCG AATIFSI+MY
Sbjct: 83   YVLIFIIYAPRREKSKILGLFTLVLTIFALVAFVSLFALHGSTRKLFCGLAATIFSIIMY 142

Query: 687  AAPLSIMTLVVRTKSVEFMPFFLSLFVFLCGTSWFVYGLLGHDPFVYVPNGFGCLLGTLQ 508
            A+PLSI+ LV++TKSVEFMPFFLSLFVFLCGTSWF+YGLLG DPFV +PNGFGC LGTLQ
Sbjct: 143  ASPLSIIRLVIKTKSVEFMPFFLSLFVFLCGTSWFIYGLLGRDPFVAIPNGFGCGLGTLQ 202

Query: 507  LILYAIYRNHNKPSGPSKATTFNSIAADDANK 412
            LILY IYRN    +   K  T  S+    + K
Sbjct: 203  LILYFIYRNSKASAEAKKQPTSQSMEMGPSGK 234


>ref|XP_004150723.1| PREDICTED: bidirectional sugar transporter SWEET1-like [Cucumis
            sativus] gi|449521263|ref|XP_004167649.1| PREDICTED:
            bidirectional sugar transporter SWEET1-like [Cucumis
            sativus]
          Length = 252

 Score =  272 bits (696), Expect = 1e-70
 Identities = 140/239 (58%), Positives = 169/239 (70%)
 Frame = -2

Query: 1113 MEIAHXXXXXXXXXXXXXXXXAPVITFRRIVRSKSTEQFSGVPYVMTLLNCLLSAWYGLP 934
            M+I H                +P++TF+RI+RSKSTE+FSG+PYVMT+LNCLLSAWYGLP
Sbjct: 1    MDIPHFLFGVLGNATALFLFLSPMVTFKRIIRSKSTEEFSGIPYVMTMLNCLLSAWYGLP 60

Query: 933  FVSPHNILVSTINFTGATIESIYVVMFIIYAPRRVKVRMGMXXXXXXXXXXXXXXXXXXX 754
            FVSPHNILVSTIN TGA IE IYV++FIIYAP++ K ++G                    
Sbjct: 61   FVSPHNILVSTINGTGAVIELIYVMVFIIYAPKKEKGKIGGLFGFAMGAFTAVALVSVFA 120

Query: 753  LDGQTRKLFCGFAATIFSIVMYAAPLSIMTLVVRTKSVEFMPFFLSLFVFLCGTSWFVYG 574
            L+G+ RKLFCG AA++FSI+MY +PLSIM  V++TKSVE+MPF LSLFVFLCGTSWF+YG
Sbjct: 121  LEGKIRKLFCGLAASVFSIIMYGSPLSIMRTVIKTKSVEYMPFLLSLFVFLCGTSWFIYG 180

Query: 573  LLGHDPFVYVPNGFGCLLGTLQLILYAIYRNHNKPSGPSKATTFNSIAADDANKLEMGL 397
            LLG DPFV VPNGFGC LG LQLILY IYR   +P+   K T       +D   +EMGL
Sbjct: 181  LLGRDPFVAVPNGFGCGLGALQLILYFIYR-APRPAPDEKPTN------NDGPNMEMGL 232


>ref|XP_003523404.1| PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max]
          Length = 247

 Score =  266 bits (679), Expect = 1e-68
 Identities = 135/231 (58%), Positives = 163/231 (70%)
 Frame = -2

Query: 1113 MEIAHXXXXXXXXXXXXXXXXAPVITFRRIVRSKSTEQFSGVPYVMTLLNCLLSAWYGLP 934
            M++AH                APVITF+RI++++STE+FSG+PYVMTLLNCLLSAWYGLP
Sbjct: 1    MDVAHFLFGIFGNASALFLFLAPVITFKRIIKNRSTEKFSGIPYVMTLLNCLLSAWYGLP 60

Query: 933  FVSPHNILVSTINFTGATIESIYVVMFIIYAPRRVKVRMGMXXXXXXXXXXXXXXXXXXX 754
            FVSPHNILVST+N TG+ IE IYV++FI+ APR+ K ++                     
Sbjct: 61   FVSPHNILVSTVNGTGSLIEIIYVLIFIVLAPRKEKAKILGLFTFVLSVFSAVVFVSLFA 120

Query: 753  LDGQTRKLFCGFAATIFSIVMYAAPLSIMTLVVRTKSVEFMPFFLSLFVFLCGTSWFVYG 574
            L G +RKLFCGFAA IFSI+MY +PLSIM LV++TKSVEFMPFFLSLFVFLCGTSWF++G
Sbjct: 121  LHGNSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFG 180

Query: 573  LLGHDPFVYVPNGFGCLLGTLQLILYAIYRNHNKPSGPSKATTFNSIAADD 421
            LLG DPFV VPNG G  LGT QLILY IYR++   +G    T   S+   D
Sbjct: 181  LLGRDPFVAVPNGVGSALGTTQLILYFIYRDNKGVTGKQAPTEEESMEIGD 231


>ref|XP_003526670.1| PREDICTED: bidirectional sugar transporter SWEET1-like [Glycine max]
          Length = 247

 Score =  264 bits (675), Expect = 3e-68
 Identities = 135/232 (58%), Positives = 163/232 (70%)
 Frame = -2

Query: 1113 MEIAHXXXXXXXXXXXXXXXXAPVITFRRIVRSKSTEQFSGVPYVMTLLNCLLSAWYGLP 934
            M++AH                APVITF+RI++++STE+FSG+PYVMTLLNCLLSAWYGLP
Sbjct: 1    MDVAHFLFGIFGNASALFLFLAPVITFKRIIKNRSTEKFSGIPYVMTLLNCLLSAWYGLP 60

Query: 933  FVSPHNILVSTINFTGATIESIYVVMFIIYAPRRVKVRMGMXXXXXXXXXXXXXXXXXXX 754
            FVSPHNILVST+N TG+ IE IYV++FI+ APR+ K ++                     
Sbjct: 61   FVSPHNILVSTVNGTGSFIEIIYVLIFIVLAPRKEKAKILGLFTFVLSVFSAVVFVSLFA 120

Query: 753  LDGQTRKLFCGFAATIFSIVMYAAPLSIMTLVVRTKSVEFMPFFLSLFVFLCGTSWFVYG 574
            L G +RKLFCGFAA IFSI+MY +PLSIM LV++TKSVEFMPFFLSLFVFLCGTSWF++G
Sbjct: 121  LHGNSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFG 180

Query: 573  LLGHDPFVYVPNGFGCLLGTLQLILYAIYRNHNKPSGPSKATTFNSIAADDA 418
            LLG DPFV VPNG G  LGT+QLILY IYR++         T   S+   DA
Sbjct: 181  LLGRDPFVAVPNGVGSALGTMQLILYFIYRDNKGVPRKQAPTEEESMEMGDA 232


>ref|NP_564140.1| Nodulin MtN3-like protein [Arabidopsis thaliana]
            gi|75154590|sp|Q8L9J7.1|SWET1_ARATH RecName:
            Full=Bidirectional sugar transporter SWEET1;
            Short=AtSWEET1 gi|21594011|gb|AAM65929.1| unknown
            [Arabidopsis thaliana] gi|28393568|gb|AAO42204.1| unknown
            protein [Arabidopsis thaliana] gi|28973143|gb|AAO63896.1|
            unknown protein [Arabidopsis thaliana]
            gi|332191983|gb|AEE30104.1| Nodulin MtN3-like protein
            [Arabidopsis thaliana]
          Length = 247

 Score =  263 bits (671), Expect = 9e-68
 Identities = 132/209 (63%), Positives = 153/209 (73%)
 Frame = -2

Query: 1113 MEIAHXXXXXXXXXXXXXXXXAPVITFRRIVRSKSTEQFSGVPYVMTLLNCLLSAWYGLP 934
            M IAH                AP ITF+RI+++KSTEQFSG+PY MTLLNCLLSAWYGLP
Sbjct: 1    MNIAHTIFGVFGNATALFLFLAPSITFKRIIKNKSTEQFSGIPYPMTLLNCLLSAWYGLP 60

Query: 933  FVSPHNILVSTINFTGATIESIYVVMFIIYAPRRVKVRMGMXXXXXXXXXXXXXXXXXXX 754
            FVS  N LVSTIN TGA IE++YV++F+ YAP++ K+++                     
Sbjct: 61   FVSKDNTLVSTINGTGAVIETVYVLIFLFYAPKKEKIKIFGIFSCVLAVFATVALVSLFA 120

Query: 753  LDGQTRKLFCGFAATIFSIVMYAAPLSIMTLVVRTKSVEFMPFFLSLFVFLCGTSWFVYG 574
            L G  RKLFCG AAT+FSI+MYA+PLSIM LVV+TKSVEFMPFFLSLFVFLCGTSWFVYG
Sbjct: 121  LQGNGRKLFCGLAATVFSIIMYASPLSIMRLVVKTKSVEFMPFFLSLFVFLCGTSWFVYG 180

Query: 573  LLGHDPFVYVPNGFGCLLGTLQLILYAIY 487
            L+G DPFV +PNGFGC LGTLQLILY IY
Sbjct: 181  LIGRDPFVAIPNGFGCALGTLQLILYFIY 209


Top