BLASTX nr result

ID: Coptis24_contig00003276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003276
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279518.2| PREDICTED: probable receptor-like protein ki...   142   2e-31
emb|CAN72504.1| hypothetical protein VITISV_027278 [Vitis vinifera]   142   2e-31
ref|XP_003624367.1| Ser/Thr protein kinase [Medicago truncatula]...   140   9e-31
ref|XP_002280726.1| PREDICTED: probable receptor-like protein ki...   139   2e-30
gb|AAK20740.1| LRK33 [Triticum aestivum]                              136   9e-30

>ref|XP_002279518.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Vitis vinifera]
          Length = 689

 Score =  142 bits (358), Expect = 2e-31
 Identities = 91/248 (36%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
 Frame = +2

Query: 437  VRNLRRVLQEGMEVQWDMQGNCDSCMENDVGRCGYVSQEKKTSTEEYCFCRDGIHSDNCN 616
            +  L  VL++G  +QW   G C+SC +N  GRCGY S   K      CFC  G    +C 
Sbjct: 238  LEQLLHVLRDGFPLQWSSFGVCESC-KNKGGRCGYDSILGKVD----CFCEAG----HCQ 288

Query: 617  GPVLDLEAPAGKDITIKRQKHKTGLIVGTVMAGAAFIFLGASYIS---YKRRHKKHIRFR 787
                           ++ Q+ +  LIVG V AG +FI + A  +S   +K+R KK     
Sbjct: 289  --------------QLRHQQSQRKLIVG-VAAGGSFIVVAAVVLSIFEFKKRIKKSY--- 330

Query: 788  STDDQVLKRYLEGDNGTTPASIETFLHNYTLGRPTRFSYKQLKKYTNNFAQKIGQGGFGS 967
                    R  +   G   A  E F+  Y     T +SY  +KK ++ F  K+GQGGFG+
Sbjct: 331  -------SRKTQTVGGGRNA--EQFIKEYQSAVLTNYSYNDMKKMSSGFKDKLGQGGFGN 381

Query: 968  VFKGQLPNGFIIAVKILDETTNQIESQFLNEILTIGCIHHNHLVRLLGYCFDHSRIALIY 1147
            V+ G++ +G +IA+K+L+++ ++I   F+NE+ +IG IHH +++RLLG+C+D S+ ALIY
Sbjct: 382  VYLGKMLDGRLIAMKMLEKSNHEISHDFVNEVASIGRIHHVNVIRLLGFCWDGSKQALIY 441

Query: 1148 EYLVNGSL 1171
            EY+ NGSL
Sbjct: 442  EYMPNGSL 449


>emb|CAN72504.1| hypothetical protein VITISV_027278 [Vitis vinifera]
          Length = 689

 Score =  142 bits (358), Expect = 2e-31
 Identities = 91/248 (36%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
 Frame = +2

Query: 437  VRNLRRVLQEGMEVQWDMQGNCDSCMENDVGRCGYVSQEKKTSTEEYCFCRDGIHSDNCN 616
            +  L  VL++G  +QW   G C+SC +N  GRCGY S   K      CFC  G    +C 
Sbjct: 238  LEQLLHVLRDGFPLQWSSFGVCESC-KNKGGRCGYDSILGKVD----CFCEAG----HCQ 288

Query: 617  GPVLDLEAPAGKDITIKRQKHKTGLIVGTVMAGAAFIFLGASYIS---YKRRHKKHIRFR 787
                           ++ Q+ +  LIVG V AG +FI + A  +S   +K+R KK     
Sbjct: 289  --------------QLRHQQSQRKLIVG-VAAGGSFIVVAAVVLSIFEFKKRIKKSY--- 330

Query: 788  STDDQVLKRYLEGDNGTTPASIETFLHNYTLGRPTRFSYKQLKKYTNNFAQKIGQGGFGS 967
                    R  +   G   A  E F+  Y     T +SY  +KK ++ F  K+GQGGFG+
Sbjct: 331  -------SRKTQTVGGGRNA--EQFIKEYQSAVLTNYSYNDMKKMSSGFKDKLGQGGFGN 381

Query: 968  VFKGQLPNGFIIAVKILDETTNQIESQFLNEILTIGCIHHNHLVRLLGYCFDHSRIALIY 1147
            V+ G++ +G +IA+K+L+++ ++I   F+NE+ +IG IHH +++RLLG+C+D S+ ALIY
Sbjct: 382  VYLGKMLDGRLIAMKMLEKSNHEISHDFVNEVASIGRIHHVNVIRLLGFCWDGSKQALIY 441

Query: 1148 EYLVNGSL 1171
            EY+ NGSL
Sbjct: 442  EYMPNGSL 449


>ref|XP_003624367.1| Ser/Thr protein kinase [Medicago truncatula]
            gi|355499382|gb|AES80585.1| Ser/Thr protein kinase
            [Medicago truncatula]
          Length = 740

 Score =  140 bits (352), Expect = 9e-31
 Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 11/300 (3%)
 Frame = +2

Query: 317  LECGETSNFCYFYDGYFGQLDSCLP----FRVAIPVNITNNLSAVRN--LRRVLQEGMEV 478
            + CGE ++  Y         DS LP    F + IP+  T     V +  L + L+ G E+
Sbjct: 239  ITCGEYTDVLYTV----ADADSALPCVSSFIIVIPILGTQAAHVVNSNGLNQALKNGFEL 294

Query: 479  QWDMQ-GNCDSCMENDVGRCGYVSQEKKTSTEEYCFCRDGIHSDNCNGPVLDLEAPAGKD 655
            +W    G C  C+++  G CG         T+  CFC+DG ++ +CN           K 
Sbjct: 295  RWTGNYGECQRCIDSG-GVCG-----NDGGTQFRCFCKDGSNTTSCNSE---------KA 339

Query: 656  ITIKRQKHKTGLIVGTVMAGAA----FIFLGASYISYKRRHKKHIRFRSTDDQVLKRYLE 823
             T + ++++  +++G  +AG      FI + + Y     R ++   FR     V      
Sbjct: 340  TTSRSKRNRRFIVIGASVAGFGVTMFFIIMISCYFKKGIRRQEMTIFRKRRKHV------ 393

Query: 824  GDNGTTPASIETFLHNYTLGRPTRFSYKQLKKYTNNFAQKIGQGGFGSVFKGQLPNGFII 1003
                   +++E F+ +Y L    R+SY ++K+ TN+F  K+G GG+G V+K  L +G  +
Sbjct: 394  ------DSNVEVFMQSYNLSIARRYSYTEVKRITNSFRDKLGHGGYGVVYKASLTDGRQV 447

Query: 1004 AVKILDETTNQIESQFLNEILTIGCIHHNHLVRLLGYCFDHSRIALIYEYLVNGSLDKYI 1183
            AVK+++E+    E +F+NE+ +I    H ++V LLG+C++ ++ ALIYEY+  GSLDK+I
Sbjct: 448  AVKVINESKGNGE-EFINEVASISRTSHLNIVSLLGFCYEVNKRALIYEYMPKGSLDKFI 506


>ref|XP_002280726.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
            [Vitis vinifera]
          Length = 545

 Score =  139 bits (349), Expect = 2e-30
 Identities = 97/287 (33%), Positives = 147/287 (51%), Gaps = 7/287 (2%)
 Frame = +2

Query: 368  GQLDSCLPFRVAIPVNITNNLSAVRN----LRRVLQEGMEVQWDMQGN-CDSCMENDVGR 532
            G L +C    + +PV + + +SA+ N    L +VL +G EV W +    C  CM +  GR
Sbjct: 56   GNLGNC-NVSITVPV-LPSAVSAIINNSASLEQVLNDGFEVLWIIDDTACSECMGSG-GR 112

Query: 533  CGYVSQEKKTSTEEYCFCRDGIHSDNCNGPVLDLEAPAGKDITIKRQKHKTGLIV--GTV 706
            CGY      +  +  CFC D         P L L  PA    T++  K   G+++    +
Sbjct: 113  CGY----NTSHFQPICFCSDQ--------PYL-LRCPALPGTTVQDHKPDVGILILIAAL 159

Query: 707  MAGAAFIFLGASYISYKRRHKKHIRFRSTDDQVLKRYLEGDNGTTPASIETFLHNYTLGR 886
            + G   I + A +I   RR      +R       K+     N      +E FL  Y    
Sbjct: 160  LFGVCSIMVVAVFIWSLRRKSSSNTWRV----FWKKTRNSQN------VEAFLEKYASLA 209

Query: 887  PTRFSYKQLKKYTNNFAQKIGQGGFGSVFKGQLPNGFIIAVKILDETTNQIESQFLNEIL 1066
            P R+SY  +KK T++F  K+GQGG+G V+KG LP+G ++ VKIL E     E +F+NE+ 
Sbjct: 210  PKRYSYSDVKKMTDSFRNKLGQGGYGIVYKGNLPDGHLVVVKILSEPKGNGE-EFINEVA 268

Query: 1067 TIGCIHHNHLVRLLGYCFDHSRIALIYEYLVNGSLDKYILQKKKMNK 1207
            +I    H ++V LLG+CF+  + ALIYE++ +GSL+KYI  + +  K
Sbjct: 269  SISRTSHVNIVTLLGFCFEGHKRALIYEFMPSGSLEKYIYDENQPRK 315


>gb|AAK20740.1| LRK33 [Triticum aestivum]
          Length = 638

 Score =  136 bits (343), Expect = 9e-30
 Identities = 98/314 (31%), Positives = 143/314 (45%), Gaps = 23/314 (7%)
 Frame = +2

Query: 332  TSNFCYFYDGYFGQLDSCLPFRVA----------IPVNITNNL-------SAVRNLRRVL 460
            T+NF Y  +GY       L  +V           IP+ +  NL       S   ++ R+L
Sbjct: 173  TTNFFYLVNGYEDMSILPLDCKVVPLSDGVGGGLIPMYMFYNLMSDTLPVSFKESIERIL 232

Query: 461  QEG-MEVQWDMQGNCDSCMENDVGRCGYVSQEKKTSTEEYCFCRDGIHSDNCNGPVLDLE 637
                M V W     C  C E   GRC + SQ  +       FC  G H            
Sbjct: 233  SFAEMTVYWFNGYTCRQC-EPSGGRCAFSSQRDRQ------FCMPGPHGSRIK------- 278

Query: 638  APAGKDITIKRQKHKTGLIVGTVMAGAAFIFLGAS-----YISYKRRHKKHIRFRSTDDQ 802
                              ++    + AAF+ L  +     Y++ K R+   I  +     
Sbjct: 279  ------------------VIAATSSVAAFVVLLLTVATVLYLTLKTRYNAEIHMK----- 315

Query: 803  VLKRYLEGDNGTTPASIETFLHNYTLGRPTRFSYKQLKKYTNNFAQKIGQGGFGSVFKGQ 982
                            +E FL  Y   +PTR+++ ++KK    F +K+GQGGFGSV+KG+
Sbjct: 316  ----------------VEMFLKTYGTSKPTRYTFSEVKKMARRFKEKVGQGGFGSVYKGE 359

Query: 983  LPNGFIIAVKILDETTNQIESQFLNEILTIGCIHHNHLVRLLGYCFDHSRIALIYEYLVN 1162
            LPNG  +AVK+L+ +T + ES F+NE+ TIG IHH ++VRLLG+C +  R ALIYE++ N
Sbjct: 360  LPNGVPVAVKMLENSTGEGES-FINEVATIGLIHHANIVRLLGFCSEGMRRALIYEFMPN 418

Query: 1163 GSLDKYILQKKKMN 1204
             SL+KYI  +   N
Sbjct: 419  ESLEKYIFSRDSAN 432


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