BLASTX nr result

ID: Coptis24_contig00003275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003275
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]   101   2e-19
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]    89   1e-17
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]    87   5e-17
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...    91   6e-17
ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796...    83   7e-16

>emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]
          Length = 587

 Score =  101 bits (252), Expect = 2e-19
 Identities = 44/68 (64%), Positives = 50/68 (73%)
 Frame = -3

Query: 211 RQNYSAYDLEFYAIF*TLKHWRHYLIHNEFVLHTDHEALKHIGNQDKVSARQLRWSSYLL 32
           R  Y+ YD EFYAI   LKHW HYLIH EF+LHTDHEALKH+ +Q K+S R   W SYL 
Sbjct: 270 RSKYTTYDKEFYAIIQPLKHWEHYLIHQEFILHTDHEALKHLNSQQKLSKRHAHWVSYLQ 329

Query: 31  DFTFVLKH 8
            FTFV+KH
Sbjct: 330 RFTFVIKH 337


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score = 89.0 bits (219), Expect(2) = 1e-17
 Identities = 36/68 (52%), Positives = 54/68 (79%)
 Frame = -3

Query: 211  RQNYSAYDLEFYAIF*TLKHWRHYLIHNEFVLHTDHEALKHIGNQDKVSARQLRWSSYLL 32
            ++ YS YDLEFYA+   ++HW+HYL + EFVL++DHEAL+++ +Q K+++R  +WSS+L 
Sbjct: 951  KKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQ 1010

Query: 31   DFTFVLKH 8
             FTF LKH
Sbjct: 1011 LFTFNLKH 1018



 Score = 27.3 bits (59), Expect(2) = 1e-17
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 251 GRPVAYFSEKLTGSAK 204
           G PVA+FSEKL G+ K
Sbjct: 937 GHPVAFFSEKLNGAKK 952


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score = 86.7 bits (213), Expect(2) = 5e-17
 Identities = 35/68 (51%), Positives = 53/68 (77%)
 Frame = -3

Query: 211  RQNYSAYDLEFYAIF*TLKHWRHYLIHNEFVLHTDHEALKHIGNQDKVSARQLRWSSYLL 32
            ++ YS YDLEFYA+   ++HW+HYL + EFVL++DHEAL+++ +Q K+++R  +WSS+L 
Sbjct: 876  KKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQ 935

Query: 31   DFTFVLKH 8
             FTF L H
Sbjct: 936  LFTFNLXH 943



 Score = 27.3 bits (59), Expect(2) = 5e-17
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 251 GRPVAYFSEKLTGSAK 204
           G PVA+FSEKL G+ K
Sbjct: 862 GHPVAFFSEKLNGAKK 877


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score = 91.3 bits (225), Expect(2) = 6e-17
 Identities = 36/66 (54%), Positives = 53/66 (80%)
 Frame = -3

Query: 205 NYSAYDLEFYAIF*TLKHWRHYLIHNEFVLHTDHEALKHIGNQDKVSARQLRWSSYLLDF 26
           NYS YD EFYA+  +L+HWRHYL+  EFV+++DHEAL+++ +Q K++AR+ RW  +L D+
Sbjct: 279 NYSTYDKEFYAVVQSLRHWRHYLLPQEFVIYSDHEALRYLNSQKKLNARRARWVEFLQDY 338

Query: 25  TFVLKH 8
           T+ LKH
Sbjct: 339 TYTLKH 344



 Score = 22.7 bits (47), Expect(2) = 6e-17
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 245 PVAYFSEKLTGS 210
           P+AYFS KL+G+
Sbjct: 265 PIAYFSAKLSGA 276


>ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796705 [Glycine max]
          Length = 1010

 Score = 83.2 bits (204), Expect(2) = 7e-16
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -3

Query: 205  NYSAYDLEFYAIF*TLKHWRHYLIHNEFVLHTDHEALKHIGNQDKVSARQLRWSSYLLDF 26
            NYS YD EFYA+   LK W+HYL   EFV+H+DHE+LK+I  QDK++ R  +W  +L  F
Sbjct: 938  NYSTYDKEFYALVQALKTWQHYLYPKEFVIHSDHESLKYIKGQDKLNKRHAKWVEFLEQF 997

Query: 25   TFVLKH 8
             +V+KH
Sbjct: 998  PYVIKH 1003



 Score = 26.9 bits (58), Expect(2) = 7e-16
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 251 GRPVAYFSEKLTG 213
           G P+AYFSEKL+G
Sbjct: 922 GHPIAYFSEKLSG 934


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