BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003272
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi...   181   5e-44
dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protei...   180   1e-43
gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japo...   180   1e-43
gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indi...   180   1e-43
ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group] g...   180   1e-43

>ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Brachypodium distachyon]
          Length = 571

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/137 (64%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   DLLGRAGCLDEALGLIKRIPYKPDVVLWGSLLVACRTHKNVVMGEMVAKEMLKLDPNHCG 181
           DLLGRAG L+EAL LI+ +P+K DV LWG+LLVACR HKNV MG+M A E+LKLDP+H G
Sbjct: 344 DLLGRAGQLEEALALIETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLDPHHAG 403

Query: 182 AHVFLSNIYASVGQWCEVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDQSHHQTNK 361
           A VFLSN YA+ G+W  V EVR+SMKE  I K PGSS++ELDG V+EF++GD SH Q+++
Sbjct: 404 ACVFLSNAYAAAGKWDLVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDR 463

Query: 362 INMMLDEIARLLSLEGH 412
           I  MLDE+ + LSL+GH
Sbjct: 464 IYAMLDEVCKTLSLKGH 480


>dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 381

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/137 (62%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   DLLGRAGCLDEALGLIKRIPYKPDVVLWGSLLVACRTHKNVVMGEMVAKEMLKLDPNHCG 181
           DLLGRAG L+EAL LI+ +P+K DV LWG+LLVACR H+N  MG+MVA E+L+LDP H G
Sbjct: 154 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAG 213

Query: 182 AHVFLSNIYASVGQWCEVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDQSHHQTNK 361
           A VFLSN+YA+ G+W  V EVR+SMK+  I K PGSS++ELDG V+EF++GD SH Q+++
Sbjct: 214 AWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQ 273

Query: 362 INMMLDEIARLLSLEGH 412
           I  MLDEI + LSL+GH
Sbjct: 274 IYAMLDEIGKTLSLKGH 290


>gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japonica Group]
          Length = 1082

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/137 (62%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   DLLGRAGCLDEALGLIKRIPYKPDVVLWGSLLVACRTHKNVVMGEMVAKEMLKLDPNHCG 181
           DLLGRAG L+EAL LI+ +P+K DV LWG+LLVACR H+N  MG+MVA E+L+LDP H G
Sbjct: 346 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAG 405

Query: 182 AHVFLSNIYASVGQWCEVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDQSHHQTNK 361
           A VFLSN+YA+ G+W  V EVR+SMK+  I K PGSS++ELDG V+EF++GD SH Q+++
Sbjct: 406 AWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQ 465

Query: 362 INMMLDEIARLLSLEGH 412
           I  MLDEI + LSL+GH
Sbjct: 466 IYAMLDEIGKTLSLKGH 482


>gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indica Group]
          Length = 1073

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/137 (62%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   DLLGRAGCLDEALGLIKRIPYKPDVVLWGSLLVACRTHKNVVMGEMVAKEMLKLDPNHCG 181
           DLLGRAG L+EAL LI+ +P+K DV LWG+LLVACR H+N  MG+MVA E+L+LDP H G
Sbjct: 346 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAG 405

Query: 182 AHVFLSNIYASVGQWCEVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDQSHHQTNK 361
           A VFLSN+YA+ G+W  V EVR+SMK+  I K PGSS++ELDG V+EF++GD SH Q+++
Sbjct: 406 AWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQ 465

Query: 362 INMMLDEIARLLSLEGH 412
           I  MLDEI + LSL+GH
Sbjct: 466 IYAMLDEIGKTLSLKGH 482


>ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
           gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa
           Japonica Group]
          Length = 555

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/137 (62%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   DLLGRAGCLDEALGLIKRIPYKPDVVLWGSLLVACRTHKNVVMGEMVAKEMLKLDPNHCG 181
           DLLGRAG L+EAL LI+ +P+K DV LWG+LLVACR H+N  MG+MVA E+L+LDP H G
Sbjct: 328 DLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAG 387

Query: 182 AHVFLSNIYASVGQWCEVDEVRNSMKELGIKKSPGSSLIELDGDVHEFVAGDQSHHQTNK 361
           A VFLSN+YA+ G+W  V EVR+SMK+  I K PGSS++ELDG V+EF++GD SH Q+++
Sbjct: 388 AWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQ 447

Query: 362 INMMLDEIARLLSLEGH 412
           I  MLDEI + LSL+GH
Sbjct: 448 IYAMLDEIGKTLSLKGH 464