BLASTX nr result

ID: Coptis24_contig00003267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003267
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305487.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-37
ref|XP_002312978.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-37
ref|XP_003631574.1| PREDICTED: uncharacterized protein LOC100245...   158   3e-36
emb|CBI37919.3| unnamed protein product [Vitis vinifera]              158   3e-36
ref|XP_002277227.2| PREDICTED: uncharacterized protein LOC100252...   146   1e-32

>ref|XP_002305487.1| predicted protein [Populus trichocarpa] gi|222848451|gb|EEE85998.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  162 bits (409), Expect = 2e-37
 Identities = 81/140 (57%), Positives = 100/140 (71%)
 Frame = -3

Query: 1205 FSFTLLLIAGFCYCDDKFVEVVGTTKCADCKENDLKNSQVFSGIRVVISCKDSDEKFKTR 1026
            F  +LL  A FCY  DK VEVVGT +CADC E+++K    FSG+RV I CK  + +FKTR
Sbjct: 4    FYVSLLFAATFCYAGDKTVEVVGTGECADCAESNIKTVHAFSGLRVTIDCKPENGEFKTR 63

Query: 1025 GVGELDEEGKFKVVLPSEITKDDGQLNEECYAQLQSEPKAACPTNNGLEASKIIFKSKDN 846
            G GELDEEGKFKV LPSE+ K DG+L EECYAQL S   A CP+++GLE+SKI+ KSK +
Sbjct: 64   GFGELDEEGKFKVSLPSEVVK-DGKLKEECYAQLHSASAAPCPSHDGLESSKIVLKSKTD 122

Query: 845  RKLTLVPASELLYSSITCPS 786
             K T   A +L +S +TC S
Sbjct: 123  EKHTFGLAGKLKFSPVTCTS 142


>ref|XP_002312978.1| predicted protein [Populus trichocarpa] gi|222849386|gb|EEE86933.1|
            predicted protein [Populus trichocarpa]
          Length = 288

 Score =  160 bits (404), Expect = 9e-37
 Identities = 78/143 (54%), Positives = 100/143 (69%)
 Frame = -3

Query: 1214 LFGFSFTLLLIAGFCYCDDKFVEVVGTTKCADCKENDLKNSQVFSGIRVVISCKDSDEKF 1035
            L  F  +L+  A FCY DD   EVVG  +CADC ++++K    FSG++V I CK  + +F
Sbjct: 1    LLCFYVSLVFAAAFCYADDSTAEVVGIGECADCAQSNIKTVHAFSGLKVTIDCKPENGEF 60

Query: 1034 KTRGVGELDEEGKFKVVLPSEITKDDGQLNEECYAQLQSEPKAACPTNNGLEASKIIFKS 855
            KTRGVGELDEEGKFKV LP+++ K DG+L EECYAQL S   A CP +NGLE+SKI+FKS
Sbjct: 61   KTRGVGELDEEGKFKVSLPNDVVK-DGKLKEECYAQLHSASAAPCPAHNGLESSKIVFKS 119

Query: 854  KDNRKLTLVPASELLYSSITCPS 786
            K + K T   A +L +S +TC S
Sbjct: 120  KTDEKHTFGLAGKLKFSPVTCTS 142


>ref|XP_003631574.1| PREDICTED: uncharacterized protein LOC100245206 [Vitis vinifera]
          Length = 501

 Score =  158 bits (400), Expect = 3e-36
 Identities = 84/153 (54%), Positives = 104/153 (67%)
 Frame = -3

Query: 1244 MWALLFSRRALFGFSFTLLLIAGFCYCDDKFVEVVGTTKCADCKENDLKNSQVFSGIRVV 1065
            M  L  SR AL  F  +LL  A FC+   + VEVVG  +CADCK+ ++K SQ FSG+RV 
Sbjct: 1    MQVLPISRGALLCFWVSLLFSASFCHGSVQKVEVVGIGECADCKQRNIKTSQAFSGLRVT 60

Query: 1064 ISCKDSDEKFKTRGVGELDEEGKFKVVLPSEITKDDGQLNEECYAQLQSEPKAACPTNNG 885
            I CK ++ +FKTR VGELDEEGKFKV LP EI K DG+L EEC+AQL S     CP +NG
Sbjct: 61   IDCKLANGEFKTRAVGELDEEGKFKVSLPEEIVK-DGELKEECFAQLHSASATPCPAHNG 119

Query: 884  LEASKIIFKSKDNRKLTLVPASELLYSSITCPS 786
            LE+SK+I K+K + K T  PA +L +S  TC S
Sbjct: 120  LESSKLILKTKVDGKHTFGPAGKLKFSPATCTS 152


>emb|CBI37919.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  158 bits (400), Expect = 3e-36
 Identities = 84/153 (54%), Positives = 104/153 (67%)
 Frame = -3

Query: 1244 MWALLFSRRALFGFSFTLLLIAGFCYCDDKFVEVVGTTKCADCKENDLKNSQVFSGIRVV 1065
            M  L  SR AL  F  +LL  A FC+   + VEVVG  +CADCK+ ++K SQ FSG+RV 
Sbjct: 1    MQVLPISRGALLCFWVSLLFSASFCHGSVQKVEVVGIGECADCKQRNIKTSQAFSGLRVT 60

Query: 1064 ISCKDSDEKFKTRGVGELDEEGKFKVVLPSEITKDDGQLNEECYAQLQSEPKAACPTNNG 885
            I CK ++ +FKTR VGELDEEGKFKV LP EI K DG+L EEC+AQL S     CP +NG
Sbjct: 61   IDCKLANGEFKTRAVGELDEEGKFKVSLPEEIVK-DGELKEECFAQLHSASATPCPAHNG 119

Query: 884  LEASKIIFKSKDNRKLTLVPASELLYSSITCPS 786
            LE+SK+I K+K + K T  PA +L +S  TC S
Sbjct: 120  LESSKLILKTKVDGKHTFGPAGKLKFSPATCTS 152


>ref|XP_002277227.2| PREDICTED: uncharacterized protein LOC100252056 [Vitis vinifera]
          Length = 481

 Score =  146 bits (368), Expect = 1e-32
 Identities = 77/155 (49%), Positives = 98/155 (63%)
 Frame = -3

Query: 1250 FAMWALLFSRRALFGFSFTLLLIAGFCYCDDKFVEVVGTTKCADCKENDLKNSQVFSGIR 1071
            F M  L   + A  GF  +LL    FC+ +++ V VVGT +CADC  +++K SQ FSG+ 
Sbjct: 9    FPMQVLPIFQWAGLGFFISLLFAVSFCHGNNQEVMVVGTGECADCDHSNIKTSQAFSGLG 68

Query: 1070 VVISCKDSDEKFKTRGVGELDEEGKFKVVLPSEITKDDGQLNEECYAQLQSEPKAACPTN 891
            V I CK    +FKTR VGELDEEG+FK+ LP EI K  G+L EEC+AQL S     CP  
Sbjct: 69   VTIECKLESGEFKTRAVGELDEEGEFKLPLPKEIVK-GGKLKEECFAQLHSASAKPCPIR 127

Query: 890  NGLEASKIIFKSKDNRKLTLVPASELLYSSITCPS 786
            NG EASKII K+ +N K    PA +L +S +TC S
Sbjct: 128  NGPEASKIILKTTNNGKQVFAPAGKLKFSPVTCTS 162


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