BLASTX nr result

ID: Coptis24_contig00003261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003261
         (2416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274191.1| PREDICTED: uncharacterized protein LOC100242...   226   2e-56
ref|XP_002324720.1| predicted protein [Populus trichocarpa] gi|2...   225   5e-56
gb|AFK48096.1| unknown [Medicago truncatula]                          223   2e-55
ref|XP_004166100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   223   2e-55
ref|XP_004144056.1| PREDICTED: uncharacterized protein LOC101214...   223   2e-55

>ref|XP_002274191.1| PREDICTED: uncharacterized protein LOC100242383 [Vitis vinifera]
            gi|297738504|emb|CBI27749.3| unnamed protein product
            [Vitis vinifera]
          Length = 475

 Score =  226 bits (576), Expect = 2e-56
 Identities = 108/127 (85%), Positives = 118/127 (92%)
 Frame = +2

Query: 1931 EIGGELTDYLIALHDIKAVKTFCSRLHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 2110
            +IGGEL D++I LH  KAVKTFCSR+HFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY
Sbjct: 349  QIGGELMDFIIVLHGSKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 408

Query: 2111 TYSCSKGAFIGVSLESNIVASRMDANLCFYGDPYLTMTDILLGTVERPKAAEPLYSALRD 2290
            TYSCSKGAF+GVSLE NIVA+RMD NL FYGDPYLT  DILLGTV+RPKAAEPLY+AL+D
Sbjct: 409  TYSCSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYTALKD 468

Query: 2291 LYSKLQY 2311
            LYSKLQ+
Sbjct: 469  LYSKLQH 475


>ref|XP_002324720.1| predicted protein [Populus trichocarpa] gi|222866154|gb|EEF03285.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  225 bits (573), Expect = 5e-56
 Identities = 107/125 (85%), Positives = 116/125 (92%)
 Frame = +2

Query: 1931 EIGGELTDYLIALHDIKAVKTFCSRLHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 2110
            +IGGEL DY+I LHD KAVKTFCSR+HFSLGAGCSAAAGPVGRVLEADLRAGDRG+GMCY
Sbjct: 270  QIGGELMDYIIVLHDFKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGAGMCY 329

Query: 2111 TYSCSKGAFIGVSLESNIVASRMDANLCFYGDPYLTMTDILLGTVERPKAAEPLYSALRD 2290
            TYSCSKGAF+GVSLE NIVA+RMD NL FYGDPYLT  DILLGTV+RPKAAEPLY+ALR+
Sbjct: 330  TYSCSKGAFVGVSLEGNIVATRMDTNLKFYGDPYLTTADILLGTVDRPKAAEPLYAALRE 389

Query: 2291 LYSKL 2305
            LYS L
Sbjct: 390  LYSSL 394


>gb|AFK48096.1| unknown [Medicago truncatula]
          Length = 481

 Score =  223 bits (568), Expect = 2e-55
 Identities = 104/127 (81%), Positives = 119/127 (93%)
 Frame = +2

Query: 1931 EIGGELTDYLIALHDIKAVKTFCSRLHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 2110
            +IGGEL D+++ LHD KAVKTFCSR+HFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY
Sbjct: 355  QIGGELMDFIVVLHDTKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 414

Query: 2111 TYSCSKGAFIGVSLESNIVASRMDANLCFYGDPYLTMTDILLGTVERPKAAEPLYSALRD 2290
            TYSCSKGAF+GVSLE NIVA+RMDANL FYGDPYLT +DILLG V+RP+AA+PLY++L+D
Sbjct: 415  TYSCSKGAFVGVSLEGNIVATRMDANLRFYGDPYLTTSDILLGMVDRPRAAQPLYTSLQD 474

Query: 2291 LYSKLQY 2311
            LYS L+Y
Sbjct: 475  LYSSLRY 481


>ref|XP_004166100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101214492 [Cucumis
            sativus]
          Length = 469

 Score =  223 bits (567), Expect = 2e-55
 Identities = 106/126 (84%), Positives = 115/126 (91%)
 Frame = +2

Query: 1931 EIGGELTDYLIALHDIKAVKTFCSRLHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 2110
            +IGGEL D++I LH+ KAVKTFCSR+HFSLGAGCS AAGPVGRVLEADLRAGDRGSGMCY
Sbjct: 344  QIGGELMDFIIVLHNSKAVKTFCSRMHFSLGAGCSVAAGPVGRVLEADLRAGDRGSGMCY 403

Query: 2111 TYSCSKGAFIGVSLESNIVASRMDANLCFYGDPYLTMTDILLGTVERPKAAEPLYSALRD 2290
            TYSCSKGAF+GVSLE NIVA+RM  NLCFYGDPYLT +DILLGTVERP+AAEPLYSAL D
Sbjct: 404  TYSCSKGAFVGVSLEGNIVATRMSTNLCFYGDPYLTTSDILLGTVERPRAAEPLYSALDD 463

Query: 2291 LYSKLQ 2308
             YS LQ
Sbjct: 464  FYSVLQ 469


>ref|XP_004144056.1| PREDICTED: uncharacterized protein LOC101214492 [Cucumis sativus]
          Length = 469

 Score =  223 bits (567), Expect = 2e-55
 Identities = 106/126 (84%), Positives = 115/126 (91%)
 Frame = +2

Query: 1931 EIGGELTDYLIALHDIKAVKTFCSRLHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCY 2110
            +IGGEL D++I LH+ KAVKTFCSR+HFSLGAGCS AAGPVGRVLEADLRAGDRGSGMCY
Sbjct: 344  QIGGELMDFIIVLHNSKAVKTFCSRMHFSLGAGCSVAAGPVGRVLEADLRAGDRGSGMCY 403

Query: 2111 TYSCSKGAFIGVSLESNIVASRMDANLCFYGDPYLTMTDILLGTVERPKAAEPLYSALRD 2290
            TYSCSKGAF+GVSLE NIVA+RM  NLCFYGDPYLT +DILLGTVERP+AAEPLYSAL D
Sbjct: 404  TYSCSKGAFVGVSLEGNIVATRMSTNLCFYGDPYLTTSDILLGTVERPRAAEPLYSALDD 463

Query: 2291 LYSKLQ 2308
             YS LQ
Sbjct: 464  FYSVLQ 469


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