BLASTX nr result

ID: Coptis24_contig00003253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003253
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93224.1| unknown [Populus trichocarpa]                          250   7e-65
ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   249   1e-64
gb|ABK92784.1| unknown [Populus trichocarpa]                          249   2e-64
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   244   5e-63
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   243   1e-62

>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  250 bits (639), Expect = 7e-65
 Identities = 131/139 (94%), Positives = 137/139 (98%)
 Frame = +1

Query: 1   EKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 180
           EKKSRKAMLKLGMK+IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS
Sbjct: 67  EKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 126

Query: 181 SQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 360
           SQLQTQAAEQFKAPDLS+VISKPE+SAIAQDDE+VDETGVEPKDIELVMTQAGVSRSKAV
Sbjct: 127 SQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGVSRSKAV 186

Query: 361 KALTTANGDIVSAIMDLTN 417
           KAL  A+GDIVSAIM+LTN
Sbjct: 187 KALKAADGDIVSAIMELTN 205


>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  249 bits (637), Expect = 1e-64
 Identities = 130/139 (93%), Positives = 136/139 (97%)
 Frame = +1

Query: 1   EKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 180
           EKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS
Sbjct: 64  EKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 123

Query: 181 SQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 360
           SQLQTQAAEQFKAPDLSNVI+KPE+S++AQDDEDVDETGVEPKDIELVMTQAGVSRSKAV
Sbjct: 124 SQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 183

Query: 361 KALTTANGDIVSAIMDLTN 417
           KAL  A+GDIVSAIM+LTN
Sbjct: 184 KALKAADGDIVSAIMELTN 202


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  249 bits (636), Expect = 2e-64
 Identities = 130/138 (94%), Positives = 136/138 (98%)
 Frame = +1

Query: 1   EKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 180
           EKKSRKAMLKLGMK+IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS
Sbjct: 66  EKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 125

Query: 181 SQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 360
           SQLQTQAAEQFKAPDLS+VISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAV
Sbjct: 126 SQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVMTQAGVSRSKAV 185

Query: 361 KALTTANGDIVSAIMDLT 414
           KAL  A+GDIVSAIMDLT
Sbjct: 186 KALKAADGDIVSAIMDLT 203


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  244 bits (623), Expect = 5e-63
 Identities = 127/139 (91%), Positives = 133/139 (95%)
 Frame = +1

Query: 1   EKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 180
           EKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDLS
Sbjct: 63  EKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLS 122

Query: 181 SQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 360
           SQLQTQAAEQFKAP+LSNVISKPE S +AQDDEDVD+TGVEPKDIELVMTQAGVSR+KAV
Sbjct: 123 SQLQTQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIELVMTQAGVSRAKAV 182

Query: 361 KALTTANGDIVSAIMDLTN 417
           KAL  A+GDIVSAIM+LTN
Sbjct: 183 KALKAADGDIVSAIMELTN 201


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  243 bits (620), Expect = 1e-62
 Identities = 126/139 (90%), Positives = 133/139 (95%)
 Frame = +1

Query: 1   EKKSRKAMLKLGMKSIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLS 180
           EKKSRKAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDLS
Sbjct: 61  EKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLS 120

Query: 181 SQLQTQAAEQFKAPDLSNVISKPESSAIAQDDEDVDETGVEPKDIELVMTQAGVSRSKAV 360
           SQLQ+QAAEQFKAP+LSNVISKPE S +AQDDEDVDETGVEPKDIELVMTQAGVSR+KAV
Sbjct: 121 SQLQSQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDETGVEPKDIELVMTQAGVSRAKAV 180

Query: 361 KALTTANGDIVSAIMDLTN 417
           KAL  A+GDIVSAIM++TN
Sbjct: 181 KALRAADGDIVSAIMEITN 199


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