BLASTX nr result

ID: Coptis24_contig00003242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003242
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531860.1| amino acid transporter, putative [Ricinus co...   145   5e-33
ref|XP_002283468.1| PREDICTED: vacuolar amino acid transporter 1...   139   4e-31
ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1...   136   2e-30
emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]   136   2e-30
emb|CAN62250.1| hypothetical protein VITISV_027355 [Vitis vinifera]   135   3e-30

>ref|XP_002531860.1| amino acid transporter, putative [Ricinus communis]
           gi|223528510|gb|EEF30538.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 404

 Score =  145 bits (365), Expect = 5e-33
 Identities = 76/149 (51%), Positives = 96/149 (64%)
 Frame = +1

Query: 88  DDDKFSLITPLAQHDGLEGGVIYNKKDEYNQHQKEGTTFFKTCFNGLNALSGVGLLSVPY 267
           + ++ SLI PL   +  E   + + +++ NQ++K  T FFKTCFNGLNALSGVG+LS PY
Sbjct: 5   EQEEASLIIPLILDEKQEE--VGHVEEDCNQYEKGTTGFFKTCFNGLNALSGVGILSTPY 62

Query: 268 AXXXXXXXXXXXXXXXXXXXXXXXXXIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIFM 447
           A                         IK CM++DS I +YPDIGERA+G  GR ++SIFM
Sbjct: 63  AVASGGWLSLIFLFTIAISTFYSGLLIKRCMEVDSNIRTYPDIGERAFGSKGRGLISIFM 122

Query: 448 YLELYFVATGFLILEGDNLYNLFPNMGFE 534
           Y+ELY VATGFLILEGDNL NLFPN+  E
Sbjct: 123 YVELYLVATGFLILEGDNLQNLFPNVDIE 151


>ref|XP_002283468.1| PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
           gi|296082904|emb|CBI22205.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  139 bits (349), Expect = 4e-31
 Identities = 72/147 (48%), Positives = 88/147 (59%)
 Frame = +1

Query: 94  DKFSLITPLAQHDGLEGGVIYNKKDEYNQHQKEGTTFFKTCFNGLNALSGVGLLSVPYAX 273
           D F+L  PL  HD      + + +    +     T+FFKTCFNGLNALSGVG+LS PYA 
Sbjct: 7   DGFTLTLPLL-HDDQNHNKVEDIESNGRKQDVGSTSFFKTCFNGLNALSGVGILSTPYAL 65

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIFMYL 453
                                   ++ CMD    I +YPD+GERA+G +GR +VS+FMY 
Sbjct: 66  SSGGWLSLVLLLVIATATFYTGLLLRRCMDAHPNIRTYPDVGERAFGKMGRLLVSVFMYT 125

Query: 454 ELYFVATGFLILEGDNLYNLFPNMGFE 534
           ELY VATGFLILEGDNL+NLFPNMG E
Sbjct: 126 ELYLVATGFLILEGDNLHNLFPNMGLE 152


>ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1-like [Vitis vinifera]
           gi|296082903|emb|CBI22204.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/113 (59%), Positives = 79/113 (69%)
 Frame = +1

Query: 196 TTFFKTCFNGLNALSGVGLLSVPYAXXXXXXXXXXXXXXXXXXXXXXXXXIKWCMDIDSE 375
           T+FFKTCFNGLNALSG+G+LSVPYA                         ++ CMD+D  
Sbjct: 40  TSFFKTCFNGLNALSGIGILSVPYALASGGWLSLMLLFVIALATFYTGLLLQRCMDVDLN 99

Query: 376 ITSYPDIGERAYGPVGRAIVSIFMYLELYFVATGFLILEGDNLYNLFPNMGFE 534
           I +YPDIGE+A+G  GR +VSIFMYLELY VATGFLILEGDNL+NLFP +GFE
Sbjct: 100 IRTYPDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFE 152


>emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]
          Length = 302

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/113 (59%), Positives = 79/113 (69%)
 Frame = +1

Query: 196 TTFFKTCFNGLNALSGVGLLSVPYAXXXXXXXXXXXXXXXXXXXXXXXXXIKWCMDIDSE 375
           T+FFKTCFNGLNALSG+G+LSVPYA                         ++ CMD+D  
Sbjct: 40  TSFFKTCFNGLNALSGIGILSVPYALASGGWLSLMLLFVIALATFYTGLLLQRCMDVDLN 99

Query: 376 ITSYPDIGERAYGPVGRAIVSIFMYLELYFVATGFLILEGDNLYNLFPNMGFE 534
           I +YPDIGE+A+G  GR +VSIFMYLELY VATGFLILEGDNL+NLFP +GFE
Sbjct: 100 IRTYPDIGEQAFGKKGRLMVSIFMYLELYLVATGFLILEGDNLHNLFPMVGFE 152


>emb|CAN62250.1| hypothetical protein VITISV_027355 [Vitis vinifera]
          Length = 421

 Score =  135 bits (341), Expect = 3e-30
 Identities = 76/147 (51%), Positives = 89/147 (60%)
 Frame = +1

Query: 94  DKFSLITPLAQHDGLEGGVIYNKKDEYNQHQKEGTTFFKTCFNGLNALSGVGLLSVPYAX 273
           D+FS   PL  HD +  GV        +      TTFF+TCFNGLNALSGVG+LS+PYA 
Sbjct: 8   DEFSHTIPL-MHDEINRGV--------DSSTLGTTTFFQTCFNGLNALSGVGILSIPYAL 58

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIFMYL 453
                                   I+ CMD+DS I +YPDI ERA+G  G+ IVSI M +
Sbjct: 59  ASGGWLSLILLLAVAFISFYTGLLIQRCMDVDSNIRTYPDISERAFGNNGKMIVSILMSI 118

Query: 454 ELYFVATGFLILEGDNLYNLFPNMGFE 534
           ELY VATGFLILEGDNL NLFPN+GFE
Sbjct: 119 ELYLVATGFLILEGDNLQNLFPNIGFE 145


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