BLASTX nr result

ID: Coptis24_contig00003238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003238
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246...   212   5e-53
emb|CBI36960.3| unnamed protein product [Vitis vinifera]              212   5e-53
ref|XP_002515271.1| protein binding protein, putative [Ricinus c...   207   1e-51
ref|XP_002330256.1| predicted protein [Populus trichocarpa] gi|2...   203   2e-50

>ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|222857324|gb|EEE94871.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  214 bits (544), Expect = 1e-53
 Identities = 113/190 (59%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
 Frame = +3

Query: 15  LSVGAKKEMSLTRRQRALQSGKDAST---SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXX 185
           LSV +KKEM++T RQRALQ+GKDAS+   SLIEFPNGLPPAPP K KEKLTEVEQQL   
Sbjct: 342 LSVDSKKEMTVTTRQRALQTGKDASSGFPSLIEFPNGLPPAPPKKQKEKLTEVEQQLKRA 401

Query: 186 XXXXXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPN 365
                                IRKILGQDS                AQEKAANA  L  +
Sbjct: 402 EALQRRRMQVEKANRESEAEAIRKILGQDSTRKKREDKLKKRQEEMAQEKAANAMVLSSD 461

Query: 366 TIRWVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLC 545
            +RWV+ P+GT VTF +++GLPSIF SKPCSYPPPREKCA  SCTNP  YRDS+ +LPLC
Sbjct: 462 HVRWVMGPSGTTVTFPDEMGLPSIFDSKPCSYPPPREKCAAPSCTNPYKYRDSESKLPLC 521

Query: 546 SPKCYKAIHE 575
           S +CYKAIHE
Sbjct: 522 SLQCYKAIHE 531


>ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera]
          Length = 586

 Score =  212 bits (539), Expect = 5e-53
 Identities = 113/187 (60%), Positives = 127/187 (67%), Gaps = 4/187 (2%)
 Frame = +3

Query: 27  AKKEMSLTRRQRALQSGKDAST----SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXX 194
           +K+EM+LT RQRALQSGKDAS+    SLIEFPNGLPPAP  K KEKL+EVEQQL      
Sbjct: 392 SKREMTLTTRQRALQSGKDASSAPGASLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAA 451

Query: 195 XXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIR 374
                             IRKILGQDS                AQE+AANA TLP NTIR
Sbjct: 452 QRRKMQVEKAARESEAEAIRKILGQDSGRKKREDKMKKRREELAQERAANALTLPSNTIR 511

Query: 375 WVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPK 554
            V+ PTGTV+TFS+D+GLPS+F  KPC+YPPPREKCAG SCTNP  YRDSK +LPLCS  
Sbjct: 512 CVMGPTGTVLTFSKDMGLPSLFDPKPCNYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLH 571

Query: 555 CYKAIHE 575
           CYKAIH+
Sbjct: 572 CYKAIHK 578


>emb|CBI36960.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  212 bits (539), Expect = 5e-53
 Identities = 113/187 (60%), Positives = 127/187 (67%), Gaps = 4/187 (2%)
 Frame = +3

Query: 27  AKKEMSLTRRQRALQSGKDAST----SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXX 194
           +K+EM+LT RQRALQSGKDAS+    SLIEFPNGLPPAP  K KEKL+EVEQQL      
Sbjct: 304 SKREMTLTTRQRALQSGKDASSAPGASLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAA 363

Query: 195 XXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIR 374
                             IRKILGQDS                AQE+AANA TLP NTIR
Sbjct: 364 QRRKMQVEKAARESEAEAIRKILGQDSGRKKREDKMKKRREELAQERAANALTLPSNTIR 423

Query: 375 WVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPK 554
            V+ PTGTV+TFS+D+GLPS+F  KPC+YPPPREKCAG SCTNP  YRDSK +LPLCS  
Sbjct: 424 CVMGPTGTVLTFSKDMGLPSLFDPKPCNYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLH 483

Query: 555 CYKAIHE 575
           CYKAIH+
Sbjct: 484 CYKAIHK 490


>ref|XP_002515271.1| protein binding protein, putative [Ricinus communis]
           gi|223545751|gb|EEF47255.1| protein binding protein,
           putative [Ricinus communis]
          Length = 564

 Score =  207 bits (528), Expect = 1e-51
 Identities = 111/191 (58%), Positives = 124/191 (64%), Gaps = 3/191 (1%)
 Frame = +3

Query: 27  AKKEMSLTRRQRALQSGKDASTS---LIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXXX 197
           +K+EM+LT RQRALQS +D STS   LIEFPNGLPPAP  K KEKLTE+EQQL       
Sbjct: 371 SKREMTLTTRQRALQSSRDGSTSAANLIEFPNGLPPAPSRKQKEKLTELEQQLKKAEAAQ 430

Query: 198 XXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIRW 377
                            IRKILGQDS+               AQEKAANA TLP NTIR 
Sbjct: 431 KRRIQVENAERESQAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANALTLPSNTIRC 490

Query: 378 VIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPKC 557
           V+ PTGTV+TFS D+GLP IF SKPCSYPPPREKCAG SC+NP  YRDSK  LPLCS +C
Sbjct: 491 VMGPTGTVMTFSNDMGLPGIFESKPCSYPPPREKCAGPSCSNPYKYRDSKSMLPLCSLQC 550

Query: 558 YKAIHESQHLD 590
           YK + E    +
Sbjct: 551 YKTVQEQMQAE 561


>ref|XP_002330256.1| predicted protein [Populus trichocarpa] gi|222871712|gb|EEF08843.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  203 bits (516), Expect = 2e-50
 Identities = 108/190 (56%), Positives = 120/190 (63%), Gaps = 3/190 (1%)
 Frame = +3

Query: 15  LSVGAKKEMSLTRRQRALQSGKDAST---SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXX 185
           LS  +KKE ++T RQRALQ+GKD S+   SLIEFPNGLPPAPP K KEKL+EVEQQL   
Sbjct: 342 LSADSKKERTVTTRQRALQTGKDVSSGFASLIEFPNGLPPAPPKKQKEKLSEVEQQLKRA 401

Query: 186 XXXXXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPN 365
                                IRKILGQDS                AQEKA NA  L  +
Sbjct: 402 EALQRRRMQVEKANRESEAEAIRKILGQDSTRKKREDKLKKRQEEMAQEKATNAMVLASD 461

Query: 366 TIRWVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLC 545
            +RWV+ P GT VTF  ++GLPSIF SKPCSYPPPREKCA  SCTNP  YRDSK +LPLC
Sbjct: 462 HVRWVMGPAGTTVTFPTEMGLPSIFDSKPCSYPPPREKCAAPSCTNPYKYRDSKSKLPLC 521

Query: 546 SPKCYKAIHE 575
           S  CYK IHE
Sbjct: 522 SLHCYKTIHE 531


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