BLASTX nr result
ID: Coptis24_contig00003238
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003238 (634 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|2... 214 1e-53 ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246... 212 5e-53 emb|CBI36960.3| unnamed protein product [Vitis vinifera] 212 5e-53 ref|XP_002515271.1| protein binding protein, putative [Ricinus c... 207 1e-51 ref|XP_002330256.1| predicted protein [Populus trichocarpa] gi|2... 203 2e-50 >ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|222857324|gb|EEE94871.1| predicted protein [Populus trichocarpa] Length = 539 Score = 214 bits (544), Expect = 1e-53 Identities = 113/190 (59%), Positives = 128/190 (67%), Gaps = 3/190 (1%) Frame = +3 Query: 15 LSVGAKKEMSLTRRQRALQSGKDAST---SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXX 185 LSV +KKEM++T RQRALQ+GKDAS+ SLIEFPNGLPPAPP K KEKLTEVEQQL Sbjct: 342 LSVDSKKEMTVTTRQRALQTGKDASSGFPSLIEFPNGLPPAPPKKQKEKLTEVEQQLKRA 401 Query: 186 XXXXXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPN 365 IRKILGQDS AQEKAANA L + Sbjct: 402 EALQRRRMQVEKANRESEAEAIRKILGQDSTRKKREDKLKKRQEEMAQEKAANAMVLSSD 461 Query: 366 TIRWVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLC 545 +RWV+ P+GT VTF +++GLPSIF SKPCSYPPPREKCA SCTNP YRDS+ +LPLC Sbjct: 462 HVRWVMGPSGTTVTFPDEMGLPSIFDSKPCSYPPPREKCAAPSCTNPYKYRDSESKLPLC 521 Query: 546 SPKCYKAIHE 575 S +CYKAIHE Sbjct: 522 SLQCYKAIHE 531 >ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera] Length = 586 Score = 212 bits (539), Expect = 5e-53 Identities = 113/187 (60%), Positives = 127/187 (67%), Gaps = 4/187 (2%) Frame = +3 Query: 27 AKKEMSLTRRQRALQSGKDAST----SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXX 194 +K+EM+LT RQRALQSGKDAS+ SLIEFPNGLPPAP K KEKL+EVEQQL Sbjct: 392 SKREMTLTTRQRALQSGKDASSAPGASLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAA 451 Query: 195 XXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIR 374 IRKILGQDS AQE+AANA TLP NTIR Sbjct: 452 QRRKMQVEKAARESEAEAIRKILGQDSGRKKREDKMKKRREELAQERAANALTLPSNTIR 511 Query: 375 WVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPK 554 V+ PTGTV+TFS+D+GLPS+F KPC+YPPPREKCAG SCTNP YRDSK +LPLCS Sbjct: 512 CVMGPTGTVLTFSKDMGLPSLFDPKPCNYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLH 571 Query: 555 CYKAIHE 575 CYKAIH+ Sbjct: 572 CYKAIHK 578 >emb|CBI36960.3| unnamed protein product [Vitis vinifera] Length = 498 Score = 212 bits (539), Expect = 5e-53 Identities = 113/187 (60%), Positives = 127/187 (67%), Gaps = 4/187 (2%) Frame = +3 Query: 27 AKKEMSLTRRQRALQSGKDAST----SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXX 194 +K+EM+LT RQRALQSGKDAS+ SLIEFPNGLPPAP K KEKL+EVEQQL Sbjct: 304 SKREMTLTTRQRALQSGKDASSAPGASLIEFPNGLPPAPSRKQKEKLSEVEQQLKKAEAA 363 Query: 195 XXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIR 374 IRKILGQDS AQE+AANA TLP NTIR Sbjct: 364 QRRKMQVEKAARESEAEAIRKILGQDSGRKKREDKMKKRREELAQERAANALTLPSNTIR 423 Query: 375 WVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPK 554 V+ PTGTV+TFS+D+GLPS+F KPC+YPPPREKCAG SCTNP YRDSK +LPLCS Sbjct: 424 CVMGPTGTVLTFSKDMGLPSLFDPKPCNYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLH 483 Query: 555 CYKAIHE 575 CYKAIH+ Sbjct: 484 CYKAIHK 490 >ref|XP_002515271.1| protein binding protein, putative [Ricinus communis] gi|223545751|gb|EEF47255.1| protein binding protein, putative [Ricinus communis] Length = 564 Score = 207 bits (528), Expect = 1e-51 Identities = 111/191 (58%), Positives = 124/191 (64%), Gaps = 3/191 (1%) Frame = +3 Query: 27 AKKEMSLTRRQRALQSGKDASTS---LIEFPNGLPPAPPTKHKEKLTEVEQQLXXXXXXX 197 +K+EM+LT RQRALQS +D STS LIEFPNGLPPAP K KEKLTE+EQQL Sbjct: 371 SKREMTLTTRQRALQSSRDGSTSAANLIEFPNGLPPAPSRKQKEKLTELEQQLKKAEAAQ 430 Query: 198 XXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPNTIRW 377 IRKILGQDS+ AQEKAANA TLP NTIR Sbjct: 431 KRRIQVENAERESQAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANALTLPSNTIRC 490 Query: 378 VIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLCSPKC 557 V+ PTGTV+TFS D+GLP IF SKPCSYPPPREKCAG SC+NP YRDSK LPLCS +C Sbjct: 491 VMGPTGTVMTFSNDMGLPGIFESKPCSYPPPREKCAGPSCSNPYKYRDSKSMLPLCSLQC 550 Query: 558 YKAIHESQHLD 590 YK + E + Sbjct: 551 YKTVQEQMQAE 561 >ref|XP_002330256.1| predicted protein [Populus trichocarpa] gi|222871712|gb|EEF08843.1| predicted protein [Populus trichocarpa] Length = 539 Score = 203 bits (516), Expect = 2e-50 Identities = 108/190 (56%), Positives = 120/190 (63%), Gaps = 3/190 (1%) Frame = +3 Query: 15 LSVGAKKEMSLTRRQRALQSGKDAST---SLIEFPNGLPPAPPTKHKEKLTEVEQQLXXX 185 LS +KKE ++T RQRALQ+GKD S+ SLIEFPNGLPPAPP K KEKL+EVEQQL Sbjct: 342 LSADSKKERTVTTRQRALQTGKDVSSGFASLIEFPNGLPPAPPKKQKEKLSEVEQQLKRA 401 Query: 186 XXXXXXXXXXXXXXXXXXXXXIRKILGQDSNXXXXXXXXXXXXXXXAQEKAANAWTLPPN 365 IRKILGQDS AQEKA NA L + Sbjct: 402 EALQRRRMQVEKANRESEAEAIRKILGQDSTRKKREDKLKKRQEEMAQEKATNAMVLASD 461 Query: 366 TIRWVIRPTGTVVTFSEDVGLPSIFSSKPCSYPPPREKCAGSSCTNP*VYRDSKLELPLC 545 +RWV+ P GT VTF ++GLPSIF SKPCSYPPPREKCA SCTNP YRDSK +LPLC Sbjct: 462 HVRWVMGPAGTTVTFPTEMGLPSIFDSKPCSYPPPREKCAAPSCTNPYKYRDSKSKLPLC 521 Query: 546 SPKCYKAIHE 575 S CYK IHE Sbjct: 522 SLHCYKTIHE 531