BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003230
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566608.1| NADH dehydrogenase (ubiquinone) 1 beta subcompl...   150   2e-34
ref|XP_002883130.1| hypothetical protein ARALYDRAFT_479342 [Arab...   149   3e-34
ref|XP_002467439.1| hypothetical protein SORBIDRAFT_01g028100 [S...   147   1e-33
ref|NP_564540.1| NADH dehydrogenase [ubiquinone] iron-sulfur pro...   147   1e-33
ref|XP_004137473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   147   2e-33

>ref|NP_566608.1| NADH dehydrogenase (ubiquinone) 1 beta subcomplex 10 [Arabidopsis
           thaliana] gi|186510194|ref|NP_001118655.1| NADH
           dehydrogenase (ubiquinone) 1 beta subcomplex 10
           [Arabidopsis thaliana]
           gi|75165175|sp|Q94C12.1|NDBAB_ARATH RecName: Full=NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           10-B gi|14335154|gb|AAK59857.1| AT3g18410/MYF24_12
           [Arabidopsis thaliana] gi|18655369|gb|AAL76140.1|
           AT3g18410/MYF24_12 [Arabidopsis thaliana]
           gi|21594020|gb|AAM65938.1| unknown [Arabidopsis
           thaliana] gi|332642572|gb|AEE76093.1| NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex 10 [Arabidopsis thaliana]
           gi|332642573|gb|AEE76094.1| NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex 10 [Arabidopsis thaliana]
          Length = 106

 Score =  150 bits (378), Expect = 2e-34
 Identities = 66/84 (78%), Positives = 73/84 (86%)
 Frame = +3

Query: 60  KNPYKDPVAMLEMREYLVREKWIQIETCKILGEKVKWCYRVEGVNHLQKCKHLVSQYLES 239
           +NPYKDPVAM+EMRE++VREKWIQIE  KIL EKVKWCYRVEGVNH QKC+HLV QYL+S
Sbjct: 21  ENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDS 80

Query: 240 TRGVGWGKDNRPHEFHGPKPAVAE 311
           TRGVGWGKD+RP   HGPKP   E
Sbjct: 81  TRGVGWGKDHRPISLHGPKPEAVE 104


>ref|XP_002883130.1| hypothetical protein ARALYDRAFT_479342 [Arabidopsis lyrata subsp.
           lyrata] gi|297328970|gb|EFH59389.1| hypothetical protein
           ARALYDRAFT_479342 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score =  149 bits (377), Expect = 3e-34
 Identities = 66/83 (79%), Positives = 72/83 (86%)
 Frame = +3

Query: 63  NPYKDPVAMLEMREYLVREKWIQIETCKILGEKVKWCYRVEGVNHLQKCKHLVSQYLEST 242
           NPYKDPVAM+EMRE++VREKWIQIE  KIL EKVKWCYRVEGVNH QKC+HLV QYL+ST
Sbjct: 22  NPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDST 81

Query: 243 RGVGWGKDNRPHEFHGPKPAVAE 311
           RGVGWGKD+RP   HGPKP   E
Sbjct: 82  RGVGWGKDHRPISLHGPKPEAVE 104


>ref|XP_002467439.1| hypothetical protein SORBIDRAFT_01g028100 [Sorghum bicolor]
           gi|241921293|gb|EER94437.1| hypothetical protein
           SORBIDRAFT_01g028100 [Sorghum bicolor]
          Length = 104

 Score =  147 bits (372), Expect = 1e-33
 Identities = 68/101 (67%), Positives = 77/101 (76%)
 Frame = +3

Query: 3   MVRKKEVXXXXXXXXXXXXKNPYKDPVAMLEMREYLVREKWIQIETCKILGEKVKWCYRV 182
           MVRK +V            KNPY DPVAMLE RE+LVREKWIQIET KI+ E+++WCYR+
Sbjct: 1   MVRKAKVEFDEQPPDNFDPKNPYGDPVAMLEYREHLVREKWIQIETAKIIRERLRWCYRI 60

Query: 183 EGVNHLQKCKHLVSQYLESTRGVGWGKDNRPHEFHGPKPAV 305
           EG+NH QKC+HLV QYLESTRGVGWGKD RP EFH PK  V
Sbjct: 61  EGINHHQKCRHLVDQYLESTRGVGWGKDARPPEFHEPKKTV 101


>ref|NP_564540.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 6 [Arabidopsis
           thaliana] gi|75186748|sp|Q9M9B4.1|NDBAA_ARATH RecName:
           Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 10-A gi|7770329|gb|AAF69699.1|AC016041_4
           F27J15.9 [Arabidopsis thaliana]
           gi|21537015|gb|AAM61356.1| unknown [Arabidopsis
           thaliana] gi|26452057|dbj|BAC43118.1| putative
           NADH-ubiquinone oxidoreductase 12 kD subunit
           [Arabidopsis thaliana] gi|28416825|gb|AAO42943.1|
           At1g49140 [Arabidopsis thaliana]
           gi|332194274|gb|AEE32395.1| NADH dehydrogenase
           [ubiquinone] iron-sulfur protein 6 [Arabidopsis
           thaliana]
          Length = 107

 Score =  147 bits (371), Expect = 1e-33
 Identities = 64/84 (76%), Positives = 72/84 (85%)
 Frame = +3

Query: 60  KNPYKDPVAMLEMREYLVREKWIQIETCKILGEKVKWCYRVEGVNHLQKCKHLVSQYLES 239
           +NPYKDPVAM+EMRE++VREKWI IE  KIL EKVKWCYRVEGVNH QKC+HLV QYL++
Sbjct: 21  ENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDA 80

Query: 240 TRGVGWGKDNRPHEFHGPKPAVAE 311
           TRGVGWGKD+RP   HGPKP   E
Sbjct: 81  TRGVGWGKDHRPISLHGPKPVAVE 104


>ref|XP_004137473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 10-B-like isoform 1 [Cucumis sativus]
           gi|449439401|ref|XP_004137474.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           10-B-like isoform 2 [Cucumis sativus]
           gi|449503123|ref|XP_004161845.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           10-B-like [Cucumis sativus]
          Length = 105

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/103 (66%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   MVRKKEVXXXXXXXXXXXXKNPYKDPVAMLEMREYLVREKWIQIETCKILGEKVKWCYRV 182
           M RKK V            +NPYKDPVAMLEMREY+VREKWI IE  KIL EK++WCYR+
Sbjct: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 183 EGVNHLQKCKHLVSQYLESTRGVGWGKDNRPHEFHGPKPAVAE 311
           EGVNHLQKC+HLV QYL+STRG+GWGKD R    HGPK   AE
Sbjct: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAE 103