BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003227
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   418   e-114
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              403   e-110
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   376   e-102
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   375   e-101

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
            vinifera]
          Length = 893

 Score =  418 bits (1074), Expect = e-114
 Identities = 206/320 (64%), Positives = 245/320 (76%), Gaps = 5/320 (1%)
 Frame = -1

Query: 1355 HKEFHQNDLQVIVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVL 1176
            HKEFH N LQV+VATIAFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L
Sbjct: 574  HKEFHDNALQVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 633

Query: 1175 FANXXXXXXXXXXXXSEEQTKQAYRMLSDCFRYGMSTATCRAKTLVEYFGENFDYEKCLL 996
            +AN            SE+QTKQAY+MLSDCFRYGM+T  CRAKTLVEYFGE+F ++ C+L
Sbjct: 634  YANLSRVPTLLPSQRSEDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCIL 693

Query: 995  CDVCVNGPPKLQNLKEEADIFIRVLASYYAPSSYGNDSFDSTISGG----KLREKPNFRM 828
            CDVCVNGPP+ QNLK+EAD F+ V+A++Y  SS+ +D +D  I G     +  +KPN RM
Sbjct: 694  CDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRM 753

Query: 827  LISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSG 648
            L+SRIREQF KF A+D LWW+GLAR++ED+G+IR+G+D+  V  KFP+PT+LGL FLQS 
Sbjct: 754  LVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQST 813

Query: 647  IENSFLVYPEADMLLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGKRPSRS- 471
             E +F VYP+ADMLLS +  KSYSTFS+WGKGWADPEI           R   KR SR  
Sbjct: 814  TEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQRKPRKRKSRKH 873

Query: 470  QPYLGTVRGRLAEKLSTKKR 411
            QP + T RGRLA KL  +KR
Sbjct: 874  QPNMKTARGRLAAKLLIQKR 893


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  403 bits (1035), Expect = e-110
 Identities = 197/308 (63%), Positives = 236/308 (76%), Gaps = 5/308 (1%)
 Frame = -1

Query: 1355 HKEFHQNDLQVIVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVL 1176
            HKEFH N LQV+VATIAFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L
Sbjct: 533  HKEFHDNALQVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 592

Query: 1175 FANXXXXXXXXXXXXSEEQTKQAYRMLSDCFRYGMSTATCRAKTLVEYFGENFDYEKCLL 996
            +AN            SE+QTKQAY+MLSDCFRYGM+T  CRAKTLVEYFGE+F ++ C+L
Sbjct: 593  YANLSRVPTLLPSQRSEDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCIL 652

Query: 995  CDVCVNGPPKLQNLKEEADIFIRVLASYYAPSSYGNDSFDSTISGG----KLREKPNFRM 828
            CDVCVNGPP+ QNLK+EAD F+ V+A++Y  SS+ +D +D  I G     +  +KPN RM
Sbjct: 653  CDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRM 712

Query: 827  LISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSG 648
            L+SRIREQF KF A+D LWW+GLAR++ED+G+IR+G+D+  V  KFP+PT+LGL FLQS 
Sbjct: 713  LVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQST 772

Query: 647  IENSFLVYPEADMLLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGKRPSRS- 471
             E +F VYP+ADMLLS +  KSYSTFS+WGKGWADPEI           R   KR SR  
Sbjct: 773  TEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQRKPRKRKSRKH 832

Query: 470  QPYLGTVR 447
            QP + T +
Sbjct: 833  QPNMKTAQ 840


>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  385 bits (989), Expect = e-104
 Identities = 192/327 (58%), Positives = 242/327 (74%), Gaps = 13/327 (3%)
 Frame = -1

Query: 1355 HKEFHQNDLQVIVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVL 1176
            HKEFH+N +QV+VAT+AFGMGIDKSN+RRIIHYGWPQSLEAYYQEAGRAGRDGKLA+CVL
Sbjct: 574  HKEFHENLIQVVVATVAFGMGIDKSNIRRIIHYGWPQSLEAYYQEAGRAGRDGKLAECVL 633

Query: 1175 FANXXXXXXXXXXXXSEEQTKQAYRMLSDCFRYGMSTATCRAKTLVEYFGENFDYEKCLL 996
            +AN            SE QTK A++MLSDCFRYGM+T+ CRAKTLVEYFGE+F YEKCLL
Sbjct: 634  YANLSRTPSLLPSKRSEAQTKHAFKMLSDCFRYGMNTSCCRAKTLVEYFGEDFSYEKCLL 693

Query: 995  CDVCVNGPPKLQNLKEEADIFIRVLASYYAPSSYGNDSFDSTISG-------GKLREKPN 837
            CDVCVNGPP++Q+LKEEADI ++V+A+Y+   S  N SFDS+  G        +  +KPN
Sbjct: 694  CDVCVNGPPEMQDLKEEADILMKVIAAYHL--SEQNHSFDSSYDGKCNDTKSQRAVQKPN 751

Query: 836  FRMLISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFL 657
             RM +++I+EQ+ KF  +DQLWWQGLAR++E +G+IR+GD+K  V  K PEPT+LGL++L
Sbjct: 752  LRMFVTKIKEQYQKFWTTDQLWWQGLARIMEGKGYIREGDEKSHVQIKCPEPTKLGLDYL 811

Query: 656  QSGIENSFLVYPEADMLLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGKRPS 477
            +   E    VYPEADM LS+ K KSYS+F++WGKGWADPEI           R   ++P 
Sbjct: 812  EYDREQPLSVYPEADMQLSVNKHKSYSSFAEWGKGWADPEIRRQRLERKQSNRKP-RKPR 870

Query: 476  RSQPY------LGTVRGRLAEKLSTKK 414
            R++          T RGR+A KL +K+
Sbjct: 871  RTRKSGKMKLDFKTARGRIAAKLFSKQ 897


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi|223548380|gb|EEF49871.1|
            DNA helicase, putative [Ricinus communis]
          Length = 803

 Score =  376 bits (965), Expect = e-102
 Identities = 187/324 (57%), Positives = 234/324 (72%), Gaps = 10/324 (3%)
 Frame = -1

Query: 1355 HKEFHQNDLQVIVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVL 1176
            HKEFH+N L+V+VATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGK A+C+L
Sbjct: 480  HKEFHENMLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKPAECIL 539

Query: 1175 FANXXXXXXXXXXXXSEEQTKQAYRMLSDCFRYGMSTATCRAKTLVEYFGENFDYEKCLL 996
            +AN            SE Q KQAY+MLSDCFRYGM+T+ CRAKTLV+YFGE+F  EKCLL
Sbjct: 540  YANLSRAPSLLPSKRSEVQAKQAYKMLSDCFRYGMNTSNCRAKTLVQYFGEDFTSEKCLL 599

Query: 995  CDVCVNGPPKLQNLKEEADIFIRVLASYYAPSSYGNDSFDSTISGGKLR---EKPNFRML 825
            CDVCV GPPK+ N KEEADI ++++A+++  SS  + ++D T    K     ++PN RM 
Sbjct: 600  CDVCVRGPPKMHNWKEEADILMQIIAAHHGQSSSLDGAYDDTFGDLKSHRSVQRPNLRMF 659

Query: 824  ISRIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGI 645
            +S++REQ  KF   D LWW+GL R++E +G+IR+GDDK  V  KFPEPT+LG+ FL+   
Sbjct: 660  VSKLREQSQKFWGKDFLWWRGLVRIMEGKGYIREGDDKIHVQIKFPEPTKLGMEFLEYER 719

Query: 644  ENSFLVYPEADMLLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTGK-RPSRSQ 468
            +  F +YPEADMLL++ ++KSYSTF+DWGKGWADPEI           R   K R SRS+
Sbjct: 720  DQPFYIYPEADMLLAMNQRKSYSTFADWGKGWADPEIRRQRLERKRKERKPRKQRQSRSR 779

Query: 467  PY------LGTVRGRLAEKLSTKK 414
                    + T RGR+  KL  +K
Sbjct: 780  KSSKPKADMKTARGRITAKLFKQK 803


>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
            SIM-like [Cucumis sativus]
          Length = 821

 Score =  375 bits (962), Expect = e-101
 Identities = 192/327 (58%), Positives = 236/327 (72%), Gaps = 13/327 (3%)
 Frame = -1

Query: 1355 HKEFHQNDLQVIVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCVL 1176
            HK+FH+N+++V+VATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC+L
Sbjct: 498  HKDFHENNVEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCIL 557

Query: 1175 FANXXXXXXXXXXXXSEEQTKQAYRMLSDCFRYGMSTATCRAKTLVEYFGENFDYEKCLL 996
            +AN            SEEQT QAYRMLSDCFRYGM+T+ CRA+ LVEYFGE FD EKCL+
Sbjct: 558  YANLTRIPSLLPSRRSEEQTNQAYRMLSDCFRYGMNTSNCRAQKLVEYFGETFDREKCLM 617

Query: 995  CDVCVNGPPKLQNLKEEADIFIRVLASYYA-PSSYGNDSFDSTISGGKLREKPNFRMLIS 819
            CDVCV GPP +QNLKEE+DI ++ +A+++   +SY N S+       + REKPN R  +S
Sbjct: 618  CDVCVKGPPNMQNLKEESDILMQAIAAHHVKEASYDNFSYSDV--KHRSREKPNLRFFVS 675

Query: 818  RIREQFPKFVASDQLWWQGLARLLEDQGFIRDGDDKKRVTAKFPEPTELGLNFLQSGIEN 639
            ++REQ  KF A+D LWW+GLAR+LE +G++++GD K  V  KFPE T+LGL FL S  + 
Sbjct: 676  KVREQTLKFAATDILWWRGLARILEYKGYLKEGDHKIHVQIKFPELTKLGLEFL-SRSDQ 734

Query: 638  SFLVYPEADMLLSLQKKKSYSTFSDWGKGWADPEIXXXXXXXXXXXRNTG---------- 489
            +F VYPE+DMLLS+ K KS+S+FS+WGKGWADP I            +            
Sbjct: 735  TFNVYPESDMLLSMAKPKSFSSFSEWGKGWADPAIRRERLKRRRQFVDKSQGPRSRSRKP 794

Query: 488  -KRPSRSQPY-LGTVRGRLAEKLSTKK 414
             KR SR Q +   TVRGRL  KLS KK
Sbjct: 795  RKRKSRKQNFDSKTVRGRLTAKLSIKK 821