BLASTX nr result

ID: Coptis24_contig00003217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003217
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18221.3| unnamed protein product [Vitis vinifera]              608   e-172
ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic su...   608   e-172
ref|XP_002307145.1| hypothetical protein POPTRDRAFT_760228 [Popu...   596   e-168
gb|AFZ78553.1| cellulose synthase [Populus tomentosa]                 595   e-168
gb|AAO25581.1| cellulose synthase [Populus tremuloides]               595   e-168

>emb|CBI18221.3| unnamed protein product [Vitis vinifera]
          Length = 1067

 Score =  608 bits (1567), Expect = e-172
 Identities = 287/334 (85%), Positives = 306/334 (91%)
 Frame = +2

Query: 2    YQGGDGGSSSHSNELDDPDLPKMDEGRQPLSRKIPIPSSKMNPYXXXXXXXXXXXGFFFH 181
            +QGG+ G +   +ELDDPDLPKMDEGRQPLSRKIPIPSSK+NPY           GFFFH
Sbjct: 245  HQGGNDGGNFDEDELDDPDLPKMDEGRQPLSRKIPIPSSKINPYRIIIILRLVILGFFFH 304

Query: 182  YRLLHPVQDAYGLWLTSVICEIWFAVSWTLDQFPKWSPIERETYLDRLSLRYEKEGNPSE 361
            YR+LHPV DAY LWLTSVICEIWFAVSW LDQFPKW PIERETYLDRLSLRYEKEG PSE
Sbjct: 305  YRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSE 364

Query: 362  LAEIDIFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 541
            LA+IDIFVSTVDP+KEPPLITANTVLSILAVDYPV+KVACYVSDDGAAMLTFEALSETSE
Sbjct: 365  LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSE 424

Query: 542  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKDKVHPNFVRERRAMKREYEGFKVRINSLV 721
            FAR+WVPFCKKF+IEPRAPEWYF+QK+DYLKDKVHP FVRERRAMKREYE FK+RIN+LV
Sbjct: 425  FARRWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVHPEFVRERRAMKREYEEFKIRINALV 484

Query: 722  DMAKKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQDSVCDVEGNELPRLVYVSREKRP 901
             MA+KVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLG + V DVEGNELPRLVYVSREKRP
Sbjct: 485  SMAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGHNGVRDVEGNELPRLVYVSREKRP 544

Query: 902  GFDHHKKAGAMNALVRVSSIISNAPYFLNVDCDH 1003
            GFDHHKKAGAMNAL+RVS+IISNAPY LNVDCDH
Sbjct: 545  GFDHHKKAGAMNALMRVSAIISNAPYLLNVDCDH 578


>ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming]
            [Vitis vinifera]
          Length = 1096

 Score =  608 bits (1567), Expect = e-172
 Identities = 287/334 (85%), Positives = 306/334 (91%)
 Frame = +2

Query: 2    YQGGDGGSSSHSNELDDPDLPKMDEGRQPLSRKIPIPSSKMNPYXXXXXXXXXXXGFFFH 181
            +QGG+ G +   +ELDDPDLPKMDEGRQPLSRKIPIPSSK+NPY           GFFFH
Sbjct: 245  HQGGNDGGNFDEDELDDPDLPKMDEGRQPLSRKIPIPSSKINPYRIIIILRLVILGFFFH 304

Query: 182  YRLLHPVQDAYGLWLTSVICEIWFAVSWTLDQFPKWSPIERETYLDRLSLRYEKEGNPSE 361
            YR+LHPV DAY LWLTSVICEIWFAVSW LDQFPKW PIERETYLDRLSLRYEKEG PSE
Sbjct: 305  YRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSE 364

Query: 362  LAEIDIFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 541
            LA+IDIFVSTVDP+KEPPLITANTVLSILAVDYPV+KVACYVSDDGAAMLTFEALSETSE
Sbjct: 365  LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSE 424

Query: 542  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKDKVHPNFVRERRAMKREYEGFKVRINSLV 721
            FAR+WVPFCKKF+IEPRAPEWYF+QK+DYLKDKVHP FVRERRAMKREYE FK+RIN+LV
Sbjct: 425  FARRWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVHPEFVRERRAMKREYEEFKIRINALV 484

Query: 722  DMAKKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQDSVCDVEGNELPRLVYVSREKRP 901
             MA+KVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLG + V DVEGNELPRLVYVSREKRP
Sbjct: 485  SMAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGHNGVRDVEGNELPRLVYVSREKRP 544

Query: 902  GFDHHKKAGAMNALVRVSSIISNAPYFLNVDCDH 1003
            GFDHHKKAGAMNAL+RVS+IISNAPY LNVDCDH
Sbjct: 545  GFDHHKKAGAMNALMRVSAIISNAPYLLNVDCDH 578


>ref|XP_002307145.1| hypothetical protein POPTRDRAFT_760228 [Populus trichocarpa]
            gi|222856594|gb|EEE94141.1| hypothetical protein
            POPTRDRAFT_760228 [Populus trichocarpa]
          Length = 1096

 Score =  596 bits (1537), Expect = e-168
 Identities = 283/334 (84%), Positives = 299/334 (89%)
 Frame = +2

Query: 2    YQGGDGGSSSHSNELDDPDLPKMDEGRQPLSRKIPIPSSKMNPYXXXXXXXXXXXGFFFH 181
            ++GG  G +   +ELDDPDLP MDEGRQPLSRK+PIPSSK+NPY           G FFH
Sbjct: 247  HEGGYDGGNFEGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGIFFH 306

Query: 182  YRLLHPVQDAYGLWLTSVICEIWFAVSWTLDQFPKWSPIERETYLDRLSLRYEKEGNPSE 361
            YR+LHPV DAYGLWLTSVICEIWF VSW LDQFPKW PIERETYLDRLSLRYEKEG PSE
Sbjct: 307  YRILHPVNDAYGLWLTSVICEIWFGVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSE 366

Query: 362  LAEIDIFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 541
            LA +DIFVSTVDP+KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE
Sbjct: 367  LASVDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 426

Query: 542  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKDKVHPNFVRERRAMKREYEGFKVRINSLV 721
            FARKWVPFCKKFNIEPRAPEWYFSQKIDYLK+KVHP FVRERRAMKREYE FKVRIN LV
Sbjct: 427  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLV 486

Query: 722  DMAKKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQDSVCDVEGNELPRLVYVSREKRP 901
              A+KVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLGQ  V DVEG ELPRLVYVSREKRP
Sbjct: 487  STAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVRDVEGCELPRLVYVSREKRP 546

Query: 902  GFDHHKKAGAMNALVRVSSIISNAPYFLNVDCDH 1003
            GF+HHKKAGAMNALVRVS+++SNAPY LNVDCDH
Sbjct: 547  GFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDH 580


>gb|AFZ78553.1| cellulose synthase [Populus tomentosa]
          Length = 1096

 Score =  595 bits (1534), Expect = e-168
 Identities = 281/334 (84%), Positives = 300/334 (89%)
 Frame = +2

Query: 2    YQGGDGGSSSHSNELDDPDLPKMDEGRQPLSRKIPIPSSKMNPYXXXXXXXXXXXGFFFH 181
            ++GG  G +   +ELDDPDLP MDEGRQPLSRK+PIPSSK+NPY           G FFH
Sbjct: 247  HEGGYDGGNFEGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVIIGIFFH 306

Query: 182  YRLLHPVQDAYGLWLTSVICEIWFAVSWTLDQFPKWSPIERETYLDRLSLRYEKEGNPSE 361
            YR+LHPV DAYGLWLTSVICEIWFAVSW LDQFPKW PIERETYLDRLSLRYEKEG PSE
Sbjct: 307  YRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSE 366

Query: 362  LAEIDIFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 541
            LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE
Sbjct: 367  LASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 426

Query: 542  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKDKVHPNFVRERRAMKREYEGFKVRINSLV 721
            FARKWVPFCKKFNIEPRAPEWYFSQKIDYLK+KVHP FVRERRAMKREYE FKVRIN LV
Sbjct: 427  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLV 486

Query: 722  DMAKKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQDSVCDVEGNELPRLVYVSREKRP 901
              A+KVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLGQ  V DVEG ELPRLVYVSREKRP
Sbjct: 487  STAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVRDVEGCELPRLVYVSREKRP 546

Query: 902  GFDHHKKAGAMNALVRVSSIISNAPYFLNVDCDH 1003
            GF+HHKKAGAMN+L+RVS+++SNAPY LNVDCDH
Sbjct: 547  GFEHHKKAGAMNSLMRVSAVLSNAPYLLNVDCDH 580


>gb|AAO25581.1| cellulose synthase [Populus tremuloides]
          Length = 1096

 Score =  595 bits (1533), Expect = e-168
 Identities = 281/334 (84%), Positives = 300/334 (89%)
 Frame = +2

Query: 2    YQGGDGGSSSHSNELDDPDLPKMDEGRQPLSRKIPIPSSKMNPYXXXXXXXXXXXGFFFH 181
            ++GG  G +   +ELDDPDLP MDEGRQPLSRK+PIPSSK+NPY           G FFH
Sbjct: 247  HKGGYDGGNFEGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVIIGIFFH 306

Query: 182  YRLLHPVQDAYGLWLTSVICEIWFAVSWTLDQFPKWSPIERETYLDRLSLRYEKEGNPSE 361
            YR+LHPV DAYGLWLTSVICEIWFAVSW LDQFPKW PIERETYLDRLSLRYEKEG PSE
Sbjct: 307  YRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSE 366

Query: 362  LAEIDIFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 541
            LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE
Sbjct: 367  LASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSE 426

Query: 542  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKDKVHPNFVRERRAMKREYEGFKVRINSLV 721
            FARKWVPFCKKFNIEPRAPEWYFSQKIDYLK+KVHP FVRERRAMKREYE FKVRIN LV
Sbjct: 427  FARKWVPFCKKFNIEPRAPEWYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLV 486

Query: 722  DMAKKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQDSVCDVEGNELPRLVYVSREKRP 901
              A+KVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLGQ  V DVEG ELPRLVYVSREKRP
Sbjct: 487  STAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVRDVEGCELPRLVYVSREKRP 546

Query: 902  GFDHHKKAGAMNALVRVSSIISNAPYFLNVDCDH 1003
            GF+HHKKAGAMN+L+RVS+++SNAPY LNVDCDH
Sbjct: 547  GFEHHKKAGAMNSLMRVSAVLSNAPYLLNVDCDH 580


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