BLASTX nr result

ID: Coptis24_contig00003212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003212
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33631.3| unnamed protein product [Vitis vinifera]               77   8e-12
ref|XP_002263800.1| PREDICTED: probable receptor-like protein ki...    70   1e-09
emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]    69   1e-09
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    69   2e-09
ref|XP_002264027.1| PREDICTED: probable receptor-like protein ki...    68   3e-09

>emb|CBI33631.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 86/350 (24%), Positives = 135/350 (38%), Gaps = 30/350 (8%)
 Frame = -3

Query: 961 LPYPF---ALPTPCHAPAIQPFCPSNETLLLTSPRTT---DTFRVLSINSTDPTAATLSI 800
           + YPF   + P  C  P  +  C         +P  T    ++R+L IN++     TL++
Sbjct: 45  ISYPFWGGSRPPYCGHPGFELTCDGE------APEFTMKEASYRILDINNS---FHTLTV 95

Query: 799 ASNSLFTCGVPVSKPNYALDSTIFSLRSNYNPGT-HLNCTSPIPSNAIRGLQNAPCLGCN 623
           A    +    P +  N  L+ +IFS  + Y   T + +C           L  AP    N
Sbjct: 96  ARADYWDSYCPPTYVNTTLNESIFSYNATYTDVTLYYDCPQ---------LTIAPSNQFN 146

Query: 622 TTSNFCYYAPF---YDVNYANCEIFHVFTPSDSFNVTIERD------LRAYLRSGFEIRF 470
            T+   YY        V+  +C ++       S    I         L   L+ GF + +
Sbjct: 147 CTNITGYYTTLDLNLSVSPGSCGVYVTVPIFQSAATAIVSGGGTLTLLTEALKGGFGLEW 206

Query: 469 TKPLE-CRGCEVSGGRCGNKPTTGSFVCFCPTSVHSFNCSD-------------GILEDL 332
                 C  C  SGG+CG   T+  F C+C       +C               GI+  +
Sbjct: 207 NASNSLCTECVESGGQCGY--TSNQFTCYCRNGYPLSSCQTTRSGSNVLRKIIIGIVAGV 264

Query: 331 STWVNXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXLTRRKKLNFHFDMRTMSNIS 152
           +T +                                           N    +R   +++
Sbjct: 265 ATLI-----------LVLAMLGCLRIIKCPLACKTLVFWKKESEDDENVEAFIRNYGSLA 313

Query: 151 PKRYSYSQLKKITNNFSSKVGEGGFGTVYKGTIQRNRVKILVAVKILKRS 2
           PKRY+YS +KK+TN+F+SK+GEGGFG VYKG +   R   ++AVK+L +S
Sbjct: 314 PKRYNYSDVKKMTNSFTSKLGEGGFGCVYKGKLPDGR---MMAVKLLSKS 360


>ref|XP_002263800.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 688

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
 Frame = -3

Query: 205 RRKKLNFHFD----MRTMSNISPKRYSYSQLKKITNNFSSKVGEGGFGTVYKGTIQRNRV 38
           RR+ L+   D    ++   N+ P RYSYS LKKITNNF +K+G+GGFG+VYKG +Q  R+
Sbjct: 333 RRRHLSLDDDIEEFLQNHKNLQPIRYSYSHLKKITNNFRNKLGQGGFGSVYKGILQSGRI 392

Query: 37  KILVAVKILKRS 2
              VAVK+L  S
Sbjct: 393 ---VAVKVLVMS 401


>emb|CAN68567.1| hypothetical protein VITISV_013174 [Vitis vinifera]
          Length = 1241

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 MRTMSNISPKRYSYSQLKKITNNFSSKVGEGGFGTVYKGTIQRNRVKILVAVKILKRS 2
           ++   N+ P RYSYS LKKITNNF +K+G+GGFG+VYKG +Q  R+   VAVK+L  S
Sbjct: 244 LQNKKNLQPIRYSYSHLKKITNNFKNKLGQGGFGSVYKGILQSGRI---VAVKVLVMS 298


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 11/219 (5%)
 Frame = -3

Query: 964 SLPYPFALP---TP---CHAPAIQPFCPSNETLLLTSPRTTDTFRVLSINSTDPTAATLS 803
           ++ YPF      TP   C  P +   C +++  +L  P   D++ V +IN TD T   + 
Sbjct: 44  TIKYPFWYKNNSTPDQYCGYPKLGLSCSNDDEPVLGLPN--DSYYVKNINYTDSTITLVD 101

Query: 802 IASNSLFTCGVPVSKPNYALDSTIFSLRS-NYNPGTHLNCTSPIPSNAIRGLQNAPCLGC 626
           I      TC  P ++ N  LD+   +    N N   + NCTS  PS++   L    CLG 
Sbjct: 102 IDVVGQ-TC--PRARHNLTLDNLPLNYTDLNLNLSFYFNCTSN-PSSSNTSLFGIECLGV 157

Query: 625 NTTSNFCYYAPFYDVNYANCEIFHVFTP---SDSFNVTIERDLRAYLRSGFEIRFTKPLE 455
            TT ++       +V++    + HV      ++   + +     A +  GF + +    E
Sbjct: 158 GTTQSYVVMTEDDEVDWIGKCMDHVVATVMRTEITGINLITGFGAAMNQGFVLDWRTVKE 217

Query: 454 CRGCEVSGGRCGNKPTTGSFVCFCPT-SVHSFNCSDGIL 341
           C  CEVSGG CG       F+CFC   S H   C    L
Sbjct: 218 CGACEVSGGFCGYNEIDEQFLCFCQDGSAHENQCKGRFL 256


>ref|XP_002264027.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 684

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 175 MRTMSNISPKRYSYSQLKKITNNFSSKVGEGGFGTVYKGTIQRNRVKILVAVKIL 11
           ++   N+ P RYSYS LKK+TNNF +K+G+GGFG+VYKG +Q  R+   VAVK+L
Sbjct: 343 LQNHKNLQPIRYSYSHLKKVTNNFKNKLGQGGFGSVYKGILQSGRI---VAVKVL 394


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