BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003205
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   217   3e-54
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   216   4e-54
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   209   5e-52
ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycin...   208   1e-51
ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|2...   203   5e-50

>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  217 bits (552), Expect = 3e-54
 Identities = 106/126 (84%), Positives = 115/126 (91%)
 Frame = -3

Query: 643 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 464
           NMDVELGK P+SGDP KMA MQAILSQFTEEQMSRYESFRRSGFQKANMKKL+ S+TGS 
Sbjct: 73  NMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQ 132

Query: 463 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 284
           K+S PMTIV SGIAKMFVGELVE  R+VM ERKETGP+RPCHIREAYRRLKL+GK+P+RS
Sbjct: 133 KISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRS 192

Query: 283 VPRLFR 266
           V RLFR
Sbjct: 193 VSRLFR 198


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  216 bits (551), Expect = 4e-54
 Identities = 103/126 (81%), Positives = 119/126 (94%)
 Frame = -3

Query: 643 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 464
           N++VEL KFPSSGDPDKMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS++G+ 
Sbjct: 95  NVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQ 154

Query: 463 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 284
           K+SVPMTIVVSGIAKMFVGELVE  R+VM ER +TGP+RPCH+REAYRRLKL+GKIP++S
Sbjct: 155 KISVPMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKS 214

Query: 283 VPRLFR 266
           VPRLFR
Sbjct: 215 VPRLFR 220


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  209 bits (533), Expect = 5e-52
 Identities = 101/126 (80%), Positives = 114/126 (90%)
 Frame = -3

Query: 643 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 464
           N+DVEL KFPS+ DPDKMA MQAILSQFTE QM+RYESFRRS  QKANM++L+ S+TGS 
Sbjct: 80  NVDVELAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGSQ 139

Query: 463 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 284
           K+S+PMTIVV GIAKMFVGELVE  RIVM ERKE+GP+RPCHIREAYRRLKL+GK+PKRS
Sbjct: 140 KISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRS 199

Query: 283 VPRLFR 266
           VPRLFR
Sbjct: 200 VPRLFR 205


>ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycine max]
           gi|255625637|gb|ACU13163.1| unknown [Glycine max]
          Length = 155

 Score =  208 bits (529), Expect = 1e-51
 Identities = 102/126 (80%), Positives = 115/126 (91%)
 Frame = -3

Query: 643 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 464
           NMDVEL K PS+GDP KMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS+TG+ 
Sbjct: 30  NMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQ 89

Query: 463 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 284
           K+SVPMTIVVSGIAKMFVGE+VE  RIVM ERKE+GP+RPCH+REAYRRLKL+GK+ KRS
Sbjct: 90  KISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRS 149

Query: 283 VPRLFR 266
             RLFR
Sbjct: 150 SSRLFR 155


>ref|XP_002299376.1| predicted protein [Populus trichocarpa] gi|222846634|gb|EEE84181.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  203 bits (516), Expect = 5e-50
 Identities = 99/126 (78%), Positives = 110/126 (87%)
 Frame = -3

Query: 643 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 464
           NMDVEL K  S+ DPDKMA MQ IL+QFTE QMSRYESFRRS  QK NMK+L+ S+TGS 
Sbjct: 97  NMDVELSKLASTADPDKMAKMQTILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQ 156

Query: 463 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 284
           K+S+PMTIVV GIAKMFVGELVE  RIVM ERKE+GP+RPCHIREAYRRLKL+GK+PKRS
Sbjct: 157 KISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRS 216

Query: 283 VPRLFR 266
           VPRLFR
Sbjct: 217 VPRLFR 222