BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003188
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr...   369   2e-99
emb|CBI27679.3| unnamed protein product [Vitis vinifera]              346   1e-92
gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli...   326   1e-86
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...   325   2e-86
ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Popu...   322   2e-85

>ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis vinifera]
            gi|147820985|emb|CAN63524.1| hypothetical protein
            VITISV_001644 [Vitis vinifera]
          Length = 389

 Score =  369 bits (946), Expect = 2e-99
 Identities = 195/398 (48%), Positives = 247/398 (62%), Gaps = 1/398 (0%)
 Frame = -3

Query: 1427 MDWDLKTPSWDFLEFDNREPXXXXXXXXXXXXXXGEHKSRGDCSVDLKLGRLGDFGEGTL 1248
            M ++LKTPSWD  E                    G  +++GDC VDLKLGRL D G+G++
Sbjct: 1    MGYNLKTPSWDLAELQKEGIPSVAPFLGSSSSLGGGQETKGDCLVDLKLGRLSDLGDGSV 60

Query: 1247 NSWKDPRDXXXXXXXXXXXSKRPRAPGNGTYNVSCLVDGCTADLNKCRDYHRRHKVCEIH 1068
            NS+K               +KR R PG+GT  VSCLVDGC +DL+KCRDYHRRHKVCE+H
Sbjct: 61   NSFKSSM----MESSSSGSAKRARTPGHGTQVVSCLVDGCKSDLSKCRDYHRRHKVCELH 116

Query: 1067 SKTPRVIVGGQEQRFCQQCSRFHMLLEFDEVKRSCRKRLDGHNRRRRKPQPEAFSLNSGS 888
            SKT +V +GG EQRFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQPE  S+ SG 
Sbjct: 117  SKTAKVTIGGHEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQPEPLSITSGR 176

Query: 887  LFTNHQGTRLLPFANTHVRPSATVVNAPWKAVVKTEEDTALYDDHPSLHYADRQNPFSGS 708
              ++HQGTRLL F+N  V P++  V + W   +KTE D  LY+ H  L++ DRQN F  S
Sbjct: 177  FLSSHQGTRLLAFSNPQVFPASAGVTSAWAGNIKTENDAVLYNSHQQLNFMDRQNSFPES 236

Query: 707  FSGSYKGEKHYPFMSINNPAVGNRPLGEVSVCQPLINTIASSQSGRVSRKMFSNGLTRVX 528
            FS SY+G K +PF+   NP      L   SVCQPL++  ++S +G   +KMFS+GL RV 
Sbjct: 237  FSRSYRG-KQFPFLQGPNPT-----LPGTSVCQPLLDPSSASGNGSGGQKMFSDGLNRVI 290

Query: 527  XXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIEGEPTGT 348
                      SPP +T  I +S +VQ + IP AQ L+P L Y  L  Y S    G   G+
Sbjct: 291  SSDRALSLLSSPPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASSQGMGGSVGS 350

Query: 347  VLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW 237
            VLVSD + ++++ C  +F +G + SS N   Q L F+W
Sbjct: 351  VLVSDGSSNANLHCPAIFQLGPDGSSTNSPHQTLSFSW 388


>emb|CBI27679.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  346 bits (888), Expect = 1e-92
 Identities = 189/406 (46%), Positives = 242/406 (59%), Gaps = 1/406 (0%)
 Frame = -3

Query: 1427 MDWDLKTPSWDFLEFDNREPXXXXXXXXXXXXXXGEHKSRGDCSVDLKLGRLGDFGEGTL 1248
            M ++LKTPSWD  E                    G  +++GDC VDLKLGRL D G+G++
Sbjct: 1    MGYNLKTPSWDLAELQKEGIPSVAPFLGSSSSLGGGQETKGDCLVDLKLGRLSDLGDGSV 60

Query: 1247 NSWKDPRDXXXXXXXXXXXSKRPRAPGNGTYNVSCLVDGCTADLNKCRDYHRRHKVCEIH 1068
            NS+K               +KR R PG+GT  VSCLVDGC +DL+KCRDYHRRHKVCE+H
Sbjct: 61   NSFKSSM----MESSSSGSAKRARTPGHGTQVVSCLVDGCKSDLSKCRDYHRRHKVCELH 116

Query: 1067 SKTPRVIVGGQEQRFCQQCSRFHMLLEFDEVKRSCRKRLDGHNRRRRKPQPEAFSLNSGS 888
            SKT +V +GG EQRFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQPE  S+ SG 
Sbjct: 117  SKTAKVTIGGHEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQPEPLSITSGR 176

Query: 887  LFTNHQGTRLLPFANTHVRPSATVVNAPWKAVVKTEEDTALYDDHPSLHYADRQNPFSGS 708
              ++HQGTRLL F+N  V P++  V + W   +KTE D  LY+ H  L++ DRQN F  S
Sbjct: 177  FLSSHQGTRLLAFSNPQVFPASAGVTSAWAGNIKTENDAVLYNSHQQLNFMDRQNSFPES 236

Query: 707  FSGSYKGEKHYPFMSINNPAVGNRPLGEVSVCQPLINTIASSQSGRVSRKMFSNGLTRVX 528
            FS SY+G K +PF+   NP      L   SVCQPL++ + SS     +  + S+      
Sbjct: 237  FSRSYRG-KQFPFLQGPNPT-----LPGTSVCQPLLDPMISSDR---ALSLLSS------ 281

Query: 527  XXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIEGEPTGT 348
                       PP +T  I +S +VQ + IP AQ L+P L Y  L  Y S    G   G+
Sbjct: 282  -----------PPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASSQGMGGSVGS 330

Query: 347  VLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW*WAIYMLS 213
            VLVSD + ++++ C  +F +G + SS N   Q L F+W + +  LS
Sbjct: 331  VLVSDGSSNANLHCPAIFQLGPDGSSTNSPHQTLSFSWEYNVLSLS 376


>gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 379

 Score =  326 bits (836), Expect = 1e-86
 Identities = 175/397 (44%), Positives = 231/397 (58%)
 Frame = -3

Query: 1427 MDWDLKTPSWDFLEFDNREPXXXXXXXXXXXXXXGEHKSRGDCSVDLKLGRLGDFGEGTL 1248
            MDW+LK P+WDF EF                      +++G+ SVDLKLGR+    E +L
Sbjct: 1    MDWNLK-PAWDFTEFQQEA------IPNVDAVDGSSSRTKGNFSVDLKLGRVNSSAEDSL 53

Query: 1247 NSWKDPRDXXXXXXXXXXXSKRPRAPGNGTYNVSCLVDGCTADLNKCRDYHRRHKVCEIH 1068
            N  K+P              KR RA  NG+   SCLVDGC +DL+ CRDYHRRHKVCE+H
Sbjct: 54   NKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELH 113

Query: 1067 SKTPRVIVGGQEQRFCQQCSRFHMLLEFDEVKRSCRKRLDGHNRRRRKPQPEAFSLNSGS 888
            SKTP+V++ GQ+QRFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQP+  S  +G+
Sbjct: 114  SKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDPLS-RTGT 172

Query: 887  LFTNHQGTRLLPFANTHVRPSATVVNAPWKAVVKTEEDTALYDDHPSLHYADRQNPFSGS 708
              +N+QG  LLPF+++H+ PSATVV   W  VV TE D   Y++H  L+  D +N F  S
Sbjct: 173  FLSNYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRLNLPDERNLFLRS 232

Query: 707  FSGSYKGEKHYPFMSINNPAVGNRPLGEVSVCQPLINTIASSQSGRVSRKMFSNGLTRVX 528
             S SYK  K + F+  +N    ++   E SV QPL+ T   S     S  +F +  T   
Sbjct: 233  PSSSYKTGKQFTFLQGDNSTFNSQTSPEASVSQPLLGTANLSDRSGASHNVFHDRST-TQ 291

Query: 527  XXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIEGEPTGT 348
                      SP TQ+SGI++S ++ P S+P+ +PL   L  H +          EP  +
Sbjct: 292  DSDCALSLLSSPTTQSSGISLSQMMPPSSMPLVRPLGTSLHNHSV----------EPMES 341

Query: 347  VLVSDTHDSDIRCHGVFYMGANESSQNGVQQRLPFTW 237
            VLVS   D ++ C GVF++G + S+ +   Q +PF W
Sbjct: 342  VLVSSDQDDNVHCPGVFHLGYDGSAASDTPQTIPFHW 378


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis vinifera]
            gi|147837620|emb|CAN77059.1| hypothetical protein
            VITISV_022138 [Vitis vinifera]
            gi|297734432|emb|CBI15679.3| unnamed protein product
            [Vitis vinifera]
          Length = 377

 Score =  325 bits (833), Expect = 2e-86
 Identities = 179/399 (44%), Positives = 236/399 (59%), Gaps = 2/399 (0%)
 Frame = -3

Query: 1427 MDWDLKTPSWDFLEFDNREPXXXXXXXXXXXXXXGEHKSRGDCSVDLKLGRLGDFGEGTL 1248
            MDW+LKTPSWD  E +                  G HK+ GD S+DLKLG++ +      
Sbjct: 1    MDWNLKTPSWDLTELETEA--IPNIDVVGGTSSSGVHKTGGDFSIDLKLGQVSNPSSDFA 58

Query: 1247 NSWKDPRDXXXXXXXXXXXSKRPRAPGNGTYNVSCLVDGCTADLNKCRDYHRRHKVCEIH 1068
            +  K+ +            SKR RA  NG+  VSCLVDGC +DL+ CR+YHRRHKVCE+H
Sbjct: 59   DKLKEQKFSSIAAPLPSGSSKRARATNNGSQTVSCLVDGCNSDLSNCREYHRRHKVCELH 118

Query: 1067 SKTPRVIVGGQEQRFCQQCSRFHMLLEFDEVKRSCRKRLDGHNRRRRKPQPEAFSLNSGS 888
            SKT +V +GG  QRFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQPE  S   GS
Sbjct: 119  SKTAQVTIGGHTQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLS-RPGS 177

Query: 887  LFTNHQGTRLLPFANTHVRPSATVVNAPWKA-VVKTEEDTALYDDHPSLHYADRQNPFSG 711
              TN+QG+ LLPF++ H+ P+  +++  W A +VKTEE   LY+ H  L   ++Q+   G
Sbjct: 178  FLTNYQGSGLLPFSSPHLYPTTAMMSPNWGAGLVKTEEGAILYNQHQQLPLLEKQHLHLG 237

Query: 710  SFSGSYKGEKHYPFMSINNPAVGNRPLGEVSVCQPLINTIASSQSGRVSRKMFSNGLT-R 534
            S S  YKG K   F+  ++P++ N    E  VCQPL              KMF + LT +
Sbjct: 238  SSSSFYKGGKQLTFLQADHPSLSNYTTSEAPVCQPLAGH---------GCKMFYDRLTNQ 288

Query: 533  VXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIEGEPT 354
            V           SP TQ+SGI++S++VQP+S+ +AQP  P L Y+            +P 
Sbjct: 289  VLESDCALSLLSSPQTQSSGISLSNMVQPNSVSLAQPSAPSLHYN-----------NQPV 337

Query: 353  GTVLVSDTHDSDIRCHGVFYMGANESSQNGVQQRLPFTW 237
             +VLVS+   +DI C G+F++G++ SS N   Q+LPF W
Sbjct: 338  DSVLVSNAGVTDIHCPGIFHIGSDGSSGNEAPQKLPFFW 376


>ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Populus trichocarpa]
            gi|222869269|gb|EEF06400.1| hypothetical protein
            POPTRDRAFT_733659 [Populus trichocarpa]
          Length = 381

 Score =  322 bits (825), Expect = 2e-85
 Identities = 180/399 (45%), Positives = 232/399 (58%), Gaps = 2/399 (0%)
 Frame = -3

Query: 1427 MDWDLKTPSWDFLEFDNREPXXXXXXXXXXXXXXGEHKSRGDCSVDLKLGRLGDFGEGTL 1248
            MDW+LK  SWD  EF+                  G ++S G  S+DLKLGR+GD  + ++
Sbjct: 1    MDWNLKATSWDLTEFEQGAVPSISIDAFDRSTNFGVNRSGGGFSIDLKLGRVGDSSDESI 60

Query: 1247 NSWKDPRDXXXXXXXXXXXSKRPRAPGNGTYNVSCLVDGCTADLNKCRDYHRRHKVCEIH 1068
             +WK P             +KR R   +GT    CLVDGC +DL+ CRDYHRRHKVCE+H
Sbjct: 61   INWKQP-GVSKLQPLPSGSTKRARGANSGTQVAMCLVDGCNSDLSACRDYHRRHKVCELH 119

Query: 1067 SKTPRVIVGGQEQRFCQQCSRFHMLLEFDEVKRSCRKRLDGHNRRRRKPQPEAFSLNSGS 888
            SKTP+V VGGQ+QRFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQP+  S    S
Sbjct: 120  SKTPQVTVGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPDPHS-RPPS 178

Query: 887  LFTNHQGTRLLPFANTHVRPSATVVNAPWKAVVKTEEDTALYDDHPSLH-YADRQNPFSG 711
              +N+QGT+L PF+++HV PS+TV+N  W  V  TE D      H +LH   D+QN F G
Sbjct: 179  FLSNYQGTQLFPFSSSHVYPSSTVLNPTWSGVASTEAD----GRHHNLHQLPDKQNLFFG 234

Query: 710  SFSGSYKGEKHYPFMSINNPAVGNRPLGEVSVCQPLINTIA-SSQSGRVSRKMFSNGLTR 534
            S S SY G K +PF+  ++P + N+   E SVCQPL+ TIA    SG  S  MF + LT+
Sbjct: 235  SSSSSYHGVKQFPFLHWHSPGLNNQTSPEASVCQPLLRTIALPGSSGASSHSMFCDRLTQ 294

Query: 533  VXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIEGEPT 354
            +           S  T  SG   + +VQ +S+P++ P+ P +  H LG          P 
Sbjct: 295  IQDSDCALSLLSSTQTHASG---NLMVQHNSVPLSHPIGPTVHDHGLG----------PI 341

Query: 353  GTVLVSDTHDSDIRCHGVFYMGANESSQNGVQQRLPFTW 237
             +VLV +  D+++   G F   +  SS N   Q LPF W
Sbjct: 342  DSVLVFNNRDANVHFPGTFQPQSGGSSGNKAPQTLPFNW 380