BLASTX nr result

ID: Coptis24_contig00003187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003187
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279955.1| PREDICTED: auxin-induced protein 22D [Vitis ...   282   1e-73
ref|XP_002284121.1| PREDICTED: auxin-induced protein 22D [Vitis ...   277   5e-72
emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]   276   1e-71
ref|XP_002307625.1| predicted protein [Populus trichocarpa] gi|2...   269   9e-70
ref|XP_002319642.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69

>ref|XP_002279955.1| PREDICTED: auxin-induced protein 22D [Vitis vinifera]
           gi|298204847|emb|CBI34154.3| unnamed protein product
           [Vitis vinifera]
          Length = 199

 Score =  282 bits (722), Expect = 1e-73
 Identities = 142/189 (75%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
 Frame = -2

Query: 961 ECNLKATELRLGLPGSDESEKQTQASPNIK-SNKRPLGDQGNECGSENNSSVSDARGGHQ 785
           + NL+ATELRLGLPG+ + EKQ  A P++K SNKR L D   E GS NNSSVSD    H+
Sbjct: 10  DLNLEATELRLGLPGTKKPEKQ--APPSLKTSNKRALPDMNEESGSGNNSSVSDDGKSHR 67

Query: 784 DTAPAAKQQVVGWPPVRSYRKNSFQAKKNEAETSGLFVKVSMDGAPYLRKIDLKVYNGYL 605
           +TAPA K QVVGWPPVRSYRK+ FQ KK EAE    ++KVSMDGAPYLRKIDLKVY GY 
Sbjct: 68  ETAPAPKAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYP 127

Query: 604 ELLKALENMFKITIGTYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFITSCKRLRIM 425
           ELLKALE MFK ++G YSEREGYNGSE+APTYEDKDGDWMLVGDVPWNMFI+SCKRLRIM
Sbjct: 128 ELLKALEEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIM 187

Query: 424 KGSEARGLG 398
           KGSEARGLG
Sbjct: 188 KGSEARGLG 196


>ref|XP_002284121.1| PREDICTED: auxin-induced protein 22D [Vitis vinifera]
           gi|297737155|emb|CBI26356.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  277 bits (708), Expect = 5e-72
 Identities = 138/200 (69%), Positives = 161/200 (80%), Gaps = 2/200 (1%)
 Frame = -2

Query: 982 MEGLAKFEC--NLKATELRLGLPGSDESEKQTQASPNIKSNKRPLGDQGNECGSENNSSV 809
           MEG   +E   NLKATELRLGLPG DE+EK+  A   +++NKR   D  +ECGS+ +S+ 
Sbjct: 1   MEGAVAYESDLNLKATELRLGLPGRDEAEKE--ALSGVRNNKRASPDTSDECGSKGSSN- 57

Query: 808 SDARGGHQDTAPAAKQQVVGWPPVRSYRKNSFQAKKNEAETSGLFVKVSMDGAPYLRKID 629
                G ++ APA K QVVGWPP+RS+RKNSFQ KK EAE +G+FVKVSMDGAPYLRKID
Sbjct: 58  -----GDRENAPATKAQVVGWPPIRSFRKNSFQPKKTEAEAAGMFVKVSMDGAPYLRKID 112

Query: 628 LKVYNGYLELLKALENMFKITIGTYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFIT 449
           LKVY GY ELL+AL+NMFK TIG YSEREGY GSE+ PTYEDKDGDWMLVGDVPW+MF++
Sbjct: 113 LKVYKGYPELLQALQNMFKFTIGDYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWDMFMS 172

Query: 448 SCKRLRIMKGSEARGLGYAA 389
           SCKRLRIMKGS+ARGLG  A
Sbjct: 173 SCKRLRIMKGSDARGLGCGA 192


>emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]
          Length = 206

 Score =  276 bits (705), Expect = 1e-71
 Identities = 142/196 (72%), Positives = 157/196 (80%), Gaps = 8/196 (4%)
 Frame = -2

Query: 961 ECNLKATELRLGLPGSDESEKQTQASPNIK-SNKRPLGDQGNECGSENNSSVSDARGGHQ 785
           + NL+ATELRLGLPG+ + EKQ  A P++K SNKR L D   E GS NNSSVSD    H+
Sbjct: 10  DLNLEATELRLGLPGTKKPEKQ--APPSLKTSNKRALPDMNEESGSGNNSSVSDDGKSHR 67

Query: 784 DTAPAAKQ-------QVVGWPPVRSYRKNSFQAKKNEAETSGLFVKVSMDGAPYLRKIDL 626
           +TAPA K        QVVGWPPVRSYRK+ FQ KK EAE    ++KVSMDGAPYLRKIDL
Sbjct: 68  ETAPAPKNAVYNYRAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDL 127

Query: 625 KVYNGYLELLKALENMFKITIGTYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFITS 446
           KVY GY ELLKALE MFK ++G YSEREGYNGSE+APTYEDKDGDWMLVGDVPWNMFI+S
Sbjct: 128 KVYKGYPELLKALEEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFISS 187

Query: 445 CKRLRIMKGSEARGLG 398
           CKRLRIMKGSEARGLG
Sbjct: 188 CKRLRIMKGSEARGLG 203


>ref|XP_002307625.1| predicted protein [Populus trichocarpa] gi|222857074|gb|EEE94621.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  269 bits (688), Expect = 9e-70
 Identities = 135/190 (71%), Positives = 157/190 (82%), Gaps = 2/190 (1%)
 Frame = -2

Query: 961 ECNLKATELRLGLPGSDESEKQTQASPNIKSNKRPLGDQGNECGSENNSSVS-DARGGHQ 785
           + NLKATELRLGLPGSDE EK +  +P+++SNKR   +   E  S+ +SSVS +   G +
Sbjct: 6   DLNLKATELRLGLPGSDEPEKPS-TTPSVRSNKRASPEISEESRSKGSSSVSSNVENGER 64

Query: 784 DTAPAAKQQVVGWPPVRSYRKNSFQAKKNE-AETSGLFVKVSMDGAPYLRKIDLKVYNGY 608
           D+AP AK QVVGWPP+RSYRKN  Q KKN+  + +G++VKVS+DGAPYLRKIDLKVY  Y
Sbjct: 65  DSAPPAKAQVVGWPPIRSYRKNCLQPKKNDQVDGAGMYVKVSVDGAPYLRKIDLKVYKSY 124

Query: 607 LELLKALENMFKITIGTYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFITSCKRLRI 428
            ELLKALENMFK+TIG YSE EGYNGSE APTYEDKDGDWMLVGDVPW+MFI+SCKRLRI
Sbjct: 125 PELLKALENMFKLTIGEYSENEGYNGSEFAPTYEDKDGDWMLVGDVPWDMFISSCKRLRI 184

Query: 427 MKGSEARGLG 398
           MKGSEARGLG
Sbjct: 185 MKGSEARGLG 194


>ref|XP_002319642.1| predicted protein [Populus trichocarpa] gi|222858018|gb|EEE95565.1|
           predicted protein [Populus trichocarpa]
           gi|429326546|gb|AFZ78613.1| hypothetical protein
           [Populus tomentosa]
          Length = 203

 Score =  268 bits (686), Expect = 2e-69
 Identities = 143/197 (72%), Positives = 155/197 (78%), Gaps = 7/197 (3%)
 Frame = -2

Query: 961 ECNLKATELRLGLPGS--DESEKQTQASPNIKSNKRPLGDQGNE-CGS--ENNSSVS--D 803
           + NL ATELRLGLPG+   +SEKQT  S   KSNKR L D   E  GS  EN+S+VS  D
Sbjct: 6   DLNLDATELRLGLPGTATKQSEKQTPNSNLAKSNKRSLPDMNEEPAGSSRENSSTVSSND 65

Query: 802 ARGGHQDTAPAAKQQVVGWPPVRSYRKNSFQAKKNEAETSGLFVKVSMDGAPYLRKIDLK 623
            +   Q+TAP  K QVVGWPP+RSYRKN  QAKK EAE +GL+VKVSMDGAPYLRKIDLK
Sbjct: 66  KKSHDQETAPPIKAQVVGWPPIRSYRKNCLQAKKLEAEAAGLYVKVSMDGAPYLRKIDLK 125

Query: 622 VYNGYLELLKALENMFKITIGTYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFITSC 443
           VY GY ELLKALE MFK  +G YSEREGYNGSEH PTYEDKDGDWMLVGDVPW+MFI SC
Sbjct: 126 VYKGYPELLKALEEMFKSKVGEYSEREGYNGSEHVPTYEDKDGDWMLVGDVPWDMFINSC 185

Query: 442 KRLRIMKGSEARGLGYA 392
           KRLRIMK SEARGLG A
Sbjct: 186 KRLRIMKESEARGLGCA 202


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