BLASTX nr result

ID: Coptis24_contig00003184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003184
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248...   107   6e-21
ref|XP_002531334.1| conserved hypothetical protein [Ricinus comm...    90   9e-16
ref|XP_003537192.1| PREDICTED: uncharacterized protein LOC100812...    87   6e-15
ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
ref|XP_003625509.1| BRI1-KD interacting protein [Medicago trunca...    83   9e-14

>ref|XP_002274395.1| PREDICTED: uncharacterized protein LOC100248230 isoform 3 [Vitis
           vinifera] gi|225439745|ref|XP_002274341.1| PREDICTED:
           uncharacterized protein LOC100248230 isoform 1 [Vitis
           vinifera] gi|147801762|emb|CAN77855.1| hypothetical
           protein VITISV_037693 [Vitis vinifera]
           gi|297741478|emb|CBI32610.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  107 bits (266), Expect = 6e-21
 Identities = 93/251 (37%), Positives = 119/251 (47%), Gaps = 28/251 (11%)
 Frame = +3

Query: 129 LGNALSGILHVQDVHL---GCISLSVESKLPQGFNIQHSKRLNVTTTQEKSNYYGPSSC- 296
           L N+ S  LH+QDV      CI  S    +           L V  T+  +  Y  S C 
Sbjct: 44  LQNSFSQFLHIQDVKELANSCIEQSGMDVISSTEAENICGELKVRQTESPTRSYQKSFCK 103

Query: 297 -----SEEKASNLVSLDEKDEVPD-TESENLSAEC-------PISLPTFTKPVSAMKGSR 437
                S  K S   S  E+D  PD T  EN S +          SLPT  K VSAMKGSR
Sbjct: 104 CATFPSSGKTSLAGSSGEEDGNPDATLQENYSLKSLSPDISRTASLPTPLKLVSAMKGSR 163

Query: 438 EKVGIPLKKLSVTWAPDVYDPPCNSISHMVKS--HSSQRSRNKKDSKHRHXXXXXXXXXX 611
           +K GIPLKKL+VTWAPDVYDPP   +SH V++     Q   N+K+ KH+           
Sbjct: 164 DKEGIPLKKLNVTWAPDVYDPPPTIVSHTVRNCKKQQQSKNNRKNGKHKQKGKAARGSNG 223

Query: 612 XXR--YKKHAGKTDYRLKSSPTSVRL---SYPSSARLLYGDYN----QTKFGSSFLRTSL 764
             +   +K  G  D   +S     +L   ++  S+R L  D+         GSSFLR S+
Sbjct: 224 KDKKQLRKIVGSGDRGFRSFEVRDKLIASNFIDSSREL-EDFEVGSPDGYCGSSFLRKSV 282

Query: 765 AEVHVTVAEAT 797
           A+VH +VAEAT
Sbjct: 283 AKVHFSVAEAT 293


>ref|XP_002531334.1| conserved hypothetical protein [Ricinus communis]
           gi|223529056|gb|EEF31041.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 66/180 (36%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
 Frame = +3

Query: 288 SSCSEEKASNLVSLDEKDEVPDTESENLSAECPISLPTFTKPVSAMKGSREKVGIPLKKL 467
           + C E+   NL  L E+D+ P+T  + LS+E PI        VSAMKGSREK+G  L+KL
Sbjct: 62  TKCMEKFPGNL--LVEEDDEPETAMQQLSSEGPIQPAVLL--VSAMKGSREKLGASLRKL 117

Query: 468 SVTWAPDVYDPPCNSISHMVKSHSSQ----RSRNKKDSKHR-------HXXXXXXXXXXX 614
           +V+WAPDVYDP  NS+SH VKS   +    R R+K+ + ++                   
Sbjct: 118 TVSWAPDVYDPIPNSLSHTVKSKQKKSKKDRDRDKESNNYKKNGKRGQKGNSRGGGGKDK 177

Query: 615 XRYKKHAGKTDYRLKSSPTSVRLSYPSSARLLYGDYNQTKFGSSFLRTSLAEVHVTVAEA 794
            + +K  G++D   K+   S          +   DY     GSSFL+ S A  H +VAEA
Sbjct: 178 KQLRKAGGRSDRGYKTLSISESPDNLDEFNVGSPDY----CGSSFLKKSPANFHYSVAEA 233


>ref|XP_003537192.1| PREDICTED: uncharacterized protein LOC100812338 [Glycine max]
          Length = 239

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 80/248 (32%), Positives = 109/248 (43%), Gaps = 18/248 (7%)
 Frame = +3

Query: 105 VDDSVMFKLGNALSGILHVQDV----------HLGCISLSVESKLPQGFNIQHSKRLNVT 254
           V D+++ KL    S  LH+ D           H+G   +  E  L +GF +Q +K L + 
Sbjct: 10  VHDNIISKLEVTFSESLHIHDAQNSEHASEGDHIGNCDVG-ERNLREGFELQETK-LEIK 67

Query: 255 TTQEKSNY-----YGPSSCSEEKASNLVSLDEKDEVPDTESENLSAECPISLPTFTKPVS 419
             +E S +       PSS S+E+A            P  +S   +  C +SLP   K VS
Sbjct: 68  CLKECSTFPYPDMMLPSSSSDEEADA--------SSPSKQSPRQNYSCSVSLPAPRKLVS 119

Query: 420 AMKGSREKVGIPLKKLSVTWAPDVYDPPCNSISHMVKSHSSQRSRNKKDSKHRHXXXXXX 599
           AMKGSREK      KL+V WAPDVYDP    +SH VK+   Q+ R KK  K         
Sbjct: 120 AMKGSREKERGSQMKLTVKWAPDVYDPVPTLLSHTVKNKKQQKPRIKKSEKKN------G 173

Query: 600 XXXXXXRYKKHAGKTD--YRLKSSPTSVRLSYPSSARLLYGD-YNQTKFGSSFLRTSLAE 770
                  Y K     D  YR +   +   +   SS      D Y  T +   +L TSL +
Sbjct: 174 KKGQKVSYSKRGSSKDKQYRNRWFYSHDEVFEASSDNAANHDSYCGTSY---YLETSLTK 230

Query: 771 VHVTVAEA 794
           VH ++ EA
Sbjct: 231 VHWSIGEA 238


>ref|XP_002309041.1| predicted protein [Populus trichocarpa] gi|222855017|gb|EEE92564.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 62/174 (35%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
 Frame = +3

Query: 285 PSSCSEEKASNLVSLDEKDEVPDTESENL-SAECPISLPTFTKPVSAMKGSREKVGIPLK 461
           P     + +S++   DE+D  P+T  + L   E P    T    VSAMKGSREK G   +
Sbjct: 55  PVKKRHDNSSSMAPSDEEDNEPETGLQLLFPEEFPHLNSTRLPIVSAMKGSREKQGGSPR 114

Query: 462 KLSVTWAPDVYDPPCNSISHMVKSHSSQRSRNKKDSKHRHXXXXXXXXXXXXRYKKHAGK 641
           KL+V+WAPDVYDP  NS+SH VKS   + SR  +D  + H              K   GK
Sbjct: 115 KLTVSWAPDVYDPIPNSLSHSVKSKQKKSSRKDRDKDNNHNKKNGKKGQKGSSSKGLGGK 174

Query: 642 TDYRLKSSPTSVRLSY---PSSARLLYGDYNQTKFGSSFLRTSLAEVHVTVAEA 794
              + + S       Y    +     +G  +    GSSFL+ S A+ H +VAEA
Sbjct: 175 DKKQFRKSGGRSDKCYKTMDAPEDTDFGVGSPDYCGSSFLKNSGAKFHYSVAEA 228


>ref|XP_003625509.1| BRI1-KD interacting protein [Medicago truncatula]
           gi|355500524|gb|AES81727.1| BRI1-KD interacting protein
           [Medicago truncatula]
          Length = 335

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 77/245 (31%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
 Frame = +3

Query: 111 DSVMFKLGNALSGILHVQDV----HL--GCISLSVESKLPQGFNIQHSKR-----LNVTT 257
           ++ +  L +  S  LH+QD     HL  G    +V  +   G N Q   +     LN + 
Sbjct: 96  ENCISNLESTFSESLHIQDTEKSEHLSEGDAMCNVGKENLSGVNKQKKSKPNKVCLNKSA 155

Query: 258 TQEKSNYYGPSSCSEEKASNLVSLDEKDEVPDTESENLSAECPISLPTFTKPVSAMKGSR 437
           T    +   PSS S+E A + V+     E  +  S + +    ISLP  ++  SA+KGSR
Sbjct: 156 TFPTPHVMLPSSSSDEDADSSVT-----ESLNEHSAHQAYSRSISLPAPSELKSALKGSR 210

Query: 438 EKVGIPLKKLSVTWAPDVYDPPCNSISHMVKSHSSQRSRNKKDSK------HRHXXXXXX 599
           +K G P  KL+V WA DVYDP    +SH VK+    +SR KK+ K      ++       
Sbjct: 211 DKNGEPHGKLTVKWAADVYDPVPTLVSHTVKNKKQPKSRKKKNEKKNAKKGNKGNSTRGG 270

Query: 600 XXXXXXRYKKHAGKTDYRLKSSPTSVRLSYPSSARLLYGDYNQTKFGSSFLRTSLAEVHV 779
                 + +   G++D   KS  + V +   S    L      +  GSSFL+ S+ EVH 
Sbjct: 271 NGKDKKQSRNVCGQSDLCSKSWDSQV-IEGSSEFDSLDVCSQDSNCGSSFLKKSVTEVHY 329

Query: 780 TVAEA 794
           +VAEA
Sbjct: 330 SVAEA 334


Top