BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003180
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-l...   452   e-125
emb|CBI34891.3| unnamed protein product [Vitis vinifera]              452   e-125
emb|CAA63220.1| isocitrate dehydrogenase (NAD+) [Solanum tuberosum]   441   e-122
ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], ...   437   e-120
ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, puta...   437   e-120

>ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-like [Vitis vinifera]
          Length = 486

 Score =  452 bits (1163), Expect = e-125
 Identities = 227/293 (77%), Positives = 251/293 (85%), Gaps = 6/293 (2%)
 Frame = -2

Query: 863 RLGAMS--TFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHT---NFFRNASLRCFASSS 699
           R GAMS     PS SSLALK    SI+S+  + N +  K  +   + F NASLRCFAS++
Sbjct: 10  RFGAMSGAAIFPSSSSLALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAA 69

Query: 698 -IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 522
             DR++V NPIVEMDGDEMAR+MW+MIKDKLI PYLDLDI+Y+DLGILNRDATDDKVTVE
Sbjct: 70  TFDRVRVQNPIVEMDGDEMARIMWRMIKDKLIFPYLDLDIRYFDLGILNRDATDDKVTVE 129

Query: 521 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 342
           SA ATLKYNVAVKCATITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFREPILC+N+PR
Sbjct: 130 SAEATLKYNVAVKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNVPR 189

Query: 341 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 162
           IV GWKK ICIGRHAFGDQYRATD V+ GPGKLK+VF P  G  PVEL+V++FKGPGIAL
Sbjct: 190 IVPGWKKPICIGRHAFGDQYRATDTVVEGPGKLKLVFAPENGDPPVELNVYDFKGPGIAL 249

Query: 161 AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEE 3
           AMYNVDESIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQ+ YEE
Sbjct: 250 AMYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQDVYEE 302


>emb|CBI34891.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  452 bits (1163), Expect = e-125
 Identities = 227/293 (77%), Positives = 251/293 (85%), Gaps = 6/293 (2%)
 Frame = -2

Query: 863 RLGAMS--TFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHT---NFFRNASLRCFASSS 699
           R GAMS     PS SSLALK    SI+S+  + N +  K  +   + F NASLRCFAS++
Sbjct: 64  RFGAMSGAAIFPSSSSLALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAA 123

Query: 698 -IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 522
             DR++V NPIVEMDGDEMAR+MW+MIKDKLI PYLDLDI+Y+DLGILNRDATDDKVTVE
Sbjct: 124 TFDRVRVQNPIVEMDGDEMARIMWRMIKDKLIFPYLDLDIRYFDLGILNRDATDDKVTVE 183

Query: 521 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 342
           SA ATLKYNVAVKCATITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFREPILC+N+PR
Sbjct: 184 SAEATLKYNVAVKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNVPR 243

Query: 341 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 162
           IV GWKK ICIGRHAFGDQYRATD V+ GPGKLK+VF P  G  PVEL+V++FKGPGIAL
Sbjct: 244 IVPGWKKPICIGRHAFGDQYRATDTVVEGPGKLKLVFAPENGDPPVELNVYDFKGPGIAL 303

Query: 161 AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEE 3
           AMYNVDESIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQ+ YEE
Sbjct: 304 AMYNVDESIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQDVYEE 356


>emb|CAA63220.1| isocitrate dehydrogenase (NAD+) [Solanum tuberosum]
          Length = 470

 Score =  441 bits (1135), Expect = e-122
 Identities = 224/286 (78%), Positives = 246/286 (86%), Gaps = 3/286 (1%)
 Frame = -2

Query: 851 MSTFTPSPSSLALKTSPFSINSNSHYLNT-LSLKPHTNFFRNASLRCFASSS--IDRIKV 681
           +S+ + S SS+A K   F +NSN    N+ +SL   T    NAS+RCFASSS    +I+V
Sbjct: 8   VSSSSASASSIASKKLYFQVNSNRQLFNSRVSL---TTRIPNASIRCFASSSGPTSKIRV 64

Query: 680 YNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVESALATLK 501
            NPIVEMDGDEM RV+WKMIKDKLI PYL+LD KYYDLGILNRDATDD+VTVESA ATLK
Sbjct: 65  QNPIVEMDGDEMTRVIWKMIKDKLIYPYLELDTKYYDLGILNRDATDDQVTVESAEATLK 124

Query: 500 YNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPRIVSGWKK 321
           YNVAVKCATITPDE RVKEFGLKSMW+SPNGTIRNILNGTVFREPILC NIPRIV GWKK
Sbjct: 125 YNVAVKCATITPDETRVKEFGLKSMWKSPNGTIRNILNGTVFREPILCTNIPRIVPGWKK 184

Query: 320 AICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIALAMYNVDE 141
            ICIGRHAFGDQYRATD +I+GPGKLKMVFVP  G +P+ELDV++FKGPGIALAMYNVD+
Sbjct: 185 PICIGRHAFGDQYRATDRIINGPGKLKMVFVPENGESPMELDVYDFKGPGIALAMYNVDQ 244

Query: 140 SIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEE 3
           SIRAFAESSM+MA  KKWPLYLSTKNTILKKYDGRFKDIFQE YEE
Sbjct: 245 SIRAFAESSMSMAFSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEE 290


>ref|XP_003581407.1| PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic-like
           [Brachypodium distachyon]
          Length = 481

 Score =  437 bits (1124), Expect = e-120
 Identities = 222/293 (75%), Positives = 247/293 (84%), Gaps = 6/293 (2%)
 Frame = -2

Query: 863 RLGAMSTFTPSPSSLALKTSPFSINSNSHYLNTLSLKPHTN--FFRNASLRCFASSSI-- 696
           RL  M+    S ++ AL  +P  + +     + L+  P      FR ASLRC+A+++   
Sbjct: 9   RLIPMAPLPSSAATKALLLNPAPVPARGRLHSPLACLPAPGGRSFRGASLRCYAAAAAVA 68

Query: 695 --DRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRDATDDKVTVE 522
              RIKV NPIVEMDGDEM RV+WKMIKDKLI PYL+LD+KY+DLG+LNRDATDDKVTVE
Sbjct: 69  EHQRIKVQNPIVEMDGDEMTRVIWKMIKDKLIFPYLELDVKYFDLGVLNRDATDDKVTVE 128

Query: 521 SALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 342
           SA ATL+YNVAVKCATITPDE RVKEF LKSMWRSPNGTIRNILNGTVFREPILCKNIPR
Sbjct: 129 SAEATLEYNVAVKCATITPDETRVKEFKLKSMWRSPNGTIRNILNGTVFREPILCKNIPR 188

Query: 341 IVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVHEFKGPGIAL 162
           I+SGWKK ICIGRHAFGDQYRATD +I+GPGKLKMVFVP +GG PVEL+VH+FKGPG+AL
Sbjct: 189 ILSGWKKPICIGRHAFGDQYRATDTIINGPGKLKMVFVP-DGGEPVELNVHDFKGPGVAL 247

Query: 161 AMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAYEE 3
           AMYNVDESIRAFAESSMAMAL KKWPLYLSTKNTILKKYDGRFKDIFQE YEE
Sbjct: 248 AMYNVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEE 300


>ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223536033|gb|EEF37691.1| NADP-specific isocitrate
           dehydrogenase, putative [Ricinus communis]
          Length = 470

 Score =  437 bits (1123), Expect = e-120
 Identities = 227/302 (75%), Positives = 249/302 (82%), Gaps = 15/302 (4%)
 Frame = -2

Query: 863 RLGAMST---FTPSPSSLALKTSPFSINSNSHYLN----TLSLKPHTNFFRNA--SLRCF 711
           RL AMS+    +P+ SS       FS NS++   N      +    ++ F NA  SLRCF
Sbjct: 8   RLLAMSSAKMLSPAKSSSIAFKGGFSSNSSNLLFNGGLGKYNRLAFSSQFANAAVSLRCF 67

Query: 710 ASSS------IDRIKVYNPIVEMDGDEMARVMWKMIKDKLINPYLDLDIKYYDLGILNRD 549
           ASSS       DR+KV NPIVEMDGDEM RV+W+MIKDKLI PYLDLDIKY+DLGILNRD
Sbjct: 68  ASSSSSSSTGFDRVKVQNPIVEMDGDEMTRVIWRMIKDKLIFPYLDLDIKYFDLGILNRD 127

Query: 548 ATDDKVTVESALATLKYNVAVKCATITPDEGRVKEFGLKSMWRSPNGTIRNILNGTVFRE 369
           ATDDKVTVESA ATLKYNVAVKCATITPDE RVKEFGLKSMWRSPNGTIRNILNGTVFRE
Sbjct: 128 ATDDKVTVESAEATLKYNVAVKCATITPDETRVKEFGLKSMWRSPNGTIRNILNGTVFRE 187

Query: 368 PILCKNIPRIVSGWKKAICIGRHAFGDQYRATDAVISGPGKLKMVFVPAEGGTPVELDVH 189
           PILC NIPRIV GWKK ICIGRHAFGDQYRATD +I GPGKLKM+FVP +G TP+ELDV+
Sbjct: 188 PILCLNIPRIVPGWKKPICIGRHAFGDQYRATDTLIKGPGKLKMIFVPEDGNTPLELDVY 247

Query: 188 EFKGPGIALAMYNVDESIRAFAESSMAMALEKKWPLYLSTKNTILKKYDGRFKDIFQEAY 9
           +FKGPG+ALAMYNVD+SIRAFAESSM++A  KKWPLYLSTKNTILKKYDGRFKDIFQE Y
Sbjct: 248 DFKGPGVALAMYNVDQSIRAFAESSMSLAFAKKWPLYLSTKNTILKKYDGRFKDIFQEVY 307

Query: 8   EE 3
           EE
Sbjct: 308 EE 309