BLASTX nr result
ID: Coptis24_contig00003176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003176
(1102 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15278.3| unnamed protein product [Vitis vinifera] 305 1e-80
ref|XP_002267093.1| PREDICTED: uncharacterized protein LOC100260... 305 1e-80
ref|XP_002322125.1| predicted protein [Populus trichocarpa] gi|2... 290 4e-76
gb|AAM65297.1| unknown [Arabidopsis thaliana] 273 4e-71
ref|NP_201078.1| HPP integral membrane domain-containing protein... 273 4e-71
>emb|CBI15278.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 305 bits (782), Expect = 1e-80
Identities = 147/191 (76%), Positives = 163/191 (85%)
Frame = +3
Query: 228 THRSSTNNRKTTLVNASSNTVSPFWDESWKPDEKTPAPSLSDIFWPSAGAFVAMASLGKM 407
T R R+ + ASSN +PFWD WKP++ + APSLSDI WPSAGAF AMA LGKM
Sbjct: 36 TSRKIDRRRRDFGIVASSNVAAPFWD-GWKPEKSSAAPSLSDILWPSAGAFAAMAILGKM 94
Query: 408 DQMLAPKGISMSIAPLGAVCAVLFATPSSPAARKYNTFVAQIGCAAIGVLAFSLLGPGWL 587
DQ LA KGISM+IAPLGAVCAVLFATPSSPAARKYN F+AQIGCAAIGVLAFSLLGPGWL
Sbjct: 95 DQTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSLLGPGWL 154
Query: 588 ARSSALAVSIAFMLYTRSTHPPAASLPILFIDGAKLHHLNFWYAFFPGATGCILVCLIQQ 767
ARS+AL SIAFM+YTRSTHPPAASLP+LFIDGAK HHLNFWYA FPGAT CIL+CLIQ+
Sbjct: 155 ARSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATACILLCLIQE 214
Query: 768 VVCYMKDNYKF 800
+VCY+K N+KF
Sbjct: 215 MVCYLKQNFKF 225
>ref|XP_002267093.1| PREDICTED: uncharacterized protein LOC100260399 isoform 1 [Vitis
vinifera]
Length = 242
Score = 305 bits (782), Expect = 1e-80
Identities = 147/191 (76%), Positives = 163/191 (85%)
Frame = +3
Query: 228 THRSSTNNRKTTLVNASSNTVSPFWDESWKPDEKTPAPSLSDIFWPSAGAFVAMASLGKM 407
T R R+ + ASSN +PFWD WKP++ + APSLSDI WPSAGAF AMA LGKM
Sbjct: 53 TSRKIDRRRRDFGIVASSNVAAPFWD-GWKPEKSSAAPSLSDILWPSAGAFAAMAILGKM 111
Query: 408 DQMLAPKGISMSIAPLGAVCAVLFATPSSPAARKYNTFVAQIGCAAIGVLAFSLLGPGWL 587
DQ LA KGISM+IAPLGAVCAVLFATPSSPAARKYN F+AQIGCAAIGVLAFSLLGPGWL
Sbjct: 112 DQTLASKGISMTIAPLGAVCAVLFATPSSPAARKYNMFMAQIGCAAIGVLAFSLLGPGWL 171
Query: 588 ARSSALAVSIAFMLYTRSTHPPAASLPILFIDGAKLHHLNFWYAFFPGATGCILVCLIQQ 767
ARS+AL SIAFM+YTRSTHPPAASLP+LFIDGAK HHLNFWYA FPGAT CIL+CLIQ+
Sbjct: 172 ARSTALGASIAFMIYTRSTHPPAASLPLLFIDGAKFHHLNFWYALFPGATACILLCLIQE 231
Query: 768 VVCYMKDNYKF 800
+VCY+K N+KF
Sbjct: 232 MVCYLKQNFKF 242
>ref|XP_002322125.1| predicted protein [Populus trichocarpa] gi|222869121|gb|EEF06252.1|
predicted protein [Populus trichocarpa]
Length = 246
Score = 290 bits (742), Expect = 4e-76
Identities = 145/190 (76%), Positives = 158/190 (83%), Gaps = 2/190 (1%)
Frame = +3
Query: 237 SSTNNRKTTLVNASSNTVSPFWDESWKPDEKTPA--PSLSDIFWPSAGAFVAMASLGKMD 410
SS R V ASSN +P WD SWKPD TPA PS SDIFWPSAGAF AMA GKMD
Sbjct: 59 SSKITRTKHGVVASSNVSAPLWD-SWKPDN-TPASSPSFSDIFWPSAGAFAAMAIFGKMD 116
Query: 411 QMLAPKGISMSIAPLGAVCAVLFATPSSPAARKYNTFVAQIGCAAIGVLAFSLLGPGWLA 590
Q+LAPKGISM+IAPLGAV AVLF TPSSP ARKYN F+AQIGCAAIGV+AFSL GP WLA
Sbjct: 117 QILAPKGISMTIAPLGAVSAVLFVTPSSPGARKYNMFMAQIGCAAIGVIAFSLFGPSWLA 176
Query: 591 RSSALAVSIAFMLYTRSTHPPAASLPILFIDGAKLHHLNFWYAFFPGATGCILVCLIQQV 770
RS ALA SIAFM+YTRSTHPPAASLP+LFIDGA+ HHLNFWYA FPGA GCI++CLIQ++
Sbjct: 177 RSVALAASIAFMVYTRSTHPPAASLPLLFIDGARFHHLNFWYALFPGAAGCIILCLIQEI 236
Query: 771 VCYMKDNYKF 800
VCY+KDN KF
Sbjct: 237 VCYLKDNLKF 246
>gb|AAM65297.1| unknown [Arabidopsis thaliana]
Length = 243
Score = 273 bits (699), Expect = 4e-71
Identities = 129/200 (64%), Positives = 162/200 (81%), Gaps = 4/200 (2%)
Frame = +3
Query: 213 FINPTTHRSSTNNRK--TTLVNASSNTVSPFWDESWKPDEKTPAPSL--SDIFWPSAGAF 380
F+ ++ N+R+ +T+V ++ N +P WD SWKPD+ A +L SD+ WP+AGAF
Sbjct: 45 FLKQIKTPATVNHRRRVSTVVASAGNLTAPSWD-SWKPDKTAAATALLLSDVIWPAAGAF 103
Query: 381 VAMASLGKMDQMLAPKGISMSIAPLGAVCAVLFATPSSPAARKYNTFVAQIGCAAIGVLA 560
AMA LG+MDQML+PKGISMS+APLGAV A+LF TPS+PAARKYN F+AQIGCAAIGV+A
Sbjct: 104 AAMALLGRMDQMLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVA 163
Query: 561 FSLLGPGWLARSSALAVSIAFMLYTRSTHPPAASLPILFIDGAKLHHLNFWYAFFPGATG 740
FS+ GPGWLARS ALA SIAFM+ TR+ HPPAASLP++FIDGAK HHLNFWYA FPGA
Sbjct: 164 FSVFGPGWLARSVALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAA 223
Query: 741 CILVCLIQQVVCYMKDNYKF 800
C+++CL+Q +VCY+K+N KF
Sbjct: 224 CVILCLLQSIVCYLKENMKF 243
>ref|NP_201078.1| HPP integral membrane domain-containing protein [Arabidopsis
thaliana] gi|26449514|dbj|BAC41883.1| unknown protein
[Arabidopsis thaliana] gi|124301076|gb|ABN04790.1|
At5g62720 [Arabidopsis thaliana]
gi|332010264|gb|AED97647.1| HPP integral membrane
domain-containing protein [Arabidopsis thaliana]
Length = 243
Score = 273 bits (699), Expect = 4e-71
Identities = 129/200 (64%), Positives = 162/200 (81%), Gaps = 4/200 (2%)
Frame = +3
Query: 213 FINPTTHRSSTNNRK--TTLVNASSNTVSPFWDESWKPDEKTPAPSL--SDIFWPSAGAF 380
F+ ++ N+R+ +T+V ++ N +P WD SWKPD+ A +L SD+ WP+AGAF
Sbjct: 45 FLKQIKTPATVNHRRRVSTVVASAGNLTAPSWD-SWKPDKTAAATALLLSDVIWPAAGAF 103
Query: 381 VAMASLGKMDQMLAPKGISMSIAPLGAVCAVLFATPSSPAARKYNTFVAQIGCAAIGVLA 560
AMA LG+MDQML+PKGISMS+APLGAV A+LF TPS+PAARKYN F+AQIGCAAIGV+A
Sbjct: 104 AAMALLGRMDQMLSPKGISMSVAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVA 163
Query: 561 FSLLGPGWLARSSALAVSIAFMLYTRSTHPPAASLPILFIDGAKLHHLNFWYAFFPGATG 740
FS+ GPGWLARS ALA SIAFM+ TR+ HPPAASLP++FIDGAK HHLNFWYA FPGA
Sbjct: 164 FSVFGPGWLARSVALAASIAFMVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAA 223
Query: 741 CILVCLIQQVVCYMKDNYKF 800
C+++CL+Q +VCY+K+N KF
Sbjct: 224 CVILCLLQSIVCYLKENMKF 243