BLASTX nr result

ID: Coptis24_contig00003173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003173
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus co...   498   e-138
ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|2...   495   e-138
ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1...   494   e-137
ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|2...   492   e-137
ref|XP_002515442.1| ccr4-associated factor, putative [Ricinus co...   489   e-136

>ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223533306|gb|EEF35058.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 274

 Score =  498 bits (1282), Expect = e-138
 Identities = 235/274 (85%), Positives = 257/274 (93%)
 Frame = -3

Query: 941 MSILPKSDTIHIREVWNVNLEEEFDLIREIVDDYPYIAMDTEFPGIVLRPVGTFKHSSEY 762
           MS+L K D+I IREVWN NLEEEF LIREIVD+Y YIAMDTEFPGIVLRPVG FK+S+EY
Sbjct: 1   MSLLLKGDSIQIREVWNDNLEEEFSLIREIVDEYSYIAMDTEFPGIVLRPVGNFKNSNEY 60

Query: 761 HYQTLKANVDMLKLIQLGLTFSDENGNLPTCGTDKHCVWQFNFREFNVDDDVFANDSIEL 582
           HYQTLK NVDMLKLIQLGLTFSDE GNLPTCGTDK+C+WQFNFREFNV++DVFANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 581 LRQCGMDFKKNVEMGVDAYRFSQLLMTSGIVMNDDVHWVTFHSGYDFGYLLKLLTCQNLP 402
           LRQ G+DFKKN E G+DA RF +LLM+SGIV+ND VHWVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121 LRQSGIDFKKNNERGIDAMRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 401 DTQTGFFSLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERIGICHQAGSDSLLTS 222
           DTQ GFF+LINMYFPT+YDIKHLMKFCNSLHGGLNKLAELL+VER+GICHQAGSDSLLT+
Sbjct: 181 DTQLGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 221 CTFRKLKESFFNGSTEKYAGVLYGLGVENGQNTH 120
           CTFRKLKE+FF+GS EKYAGVLYGLGVENGQ+TH
Sbjct: 241 CTFRKLKENFFSGSLEKYAGVLYGLGVENGQSTH 274


>ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|222846521|gb|EEE84068.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  495 bits (1275), Expect = e-138
 Identities = 234/274 (85%), Positives = 258/274 (94%)
 Frame = -3

Query: 941 MSILPKSDTIHIREVWNVNLEEEFDLIREIVDDYPYIAMDTEFPGIVLRPVGTFKHSSEY 762
           MS+L K D+I IREVWN NLEEEF  IREIVDD+PYIAMDTEFPGIVLRPVG FK+S++Y
Sbjct: 1   MSLLLKGDSILIREVWNDNLEEEFAHIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 761 HYQTLKANVDMLKLIQLGLTFSDENGNLPTCGTDKHCVWQFNFREFNVDDDVFANDSIEL 582
           HYQTLK NVDMLKLIQLGLTFSDE GNLPTCGTDK+C+WQFNFREFNV++DVFANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 581 LRQCGMDFKKNVEMGVDAYRFSQLLMTSGIVMNDDVHWVTFHSGYDFGYLLKLLTCQNLP 402
           LRQ G+DFKKN E G+DA RF +LLM+SGIV+ND+V+WVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121 LRQSGIDFKKNNENGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 401 DTQTGFFSLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERIGICHQAGSDSLLTS 222
           DTQ GFF+LINMYFPT+YDIKHLMKFCNSLHGGLNKLAELL+VER+GICHQAGSDSLLT+
Sbjct: 181 DTQAGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 221 CTFRKLKESFFNGSTEKYAGVLYGLGVENGQNTH 120
           CTFRKLKE+FF+GS EKYAGVLYGLGVENGQNTH
Sbjct: 241 CTFRKLKENFFSGSLEKYAGVLYGLGVENGQNTH 274


>ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1 homolog 7 isoform 1
           [Vitis vinifera]
          Length = 274

 Score =  494 bits (1271), Expect = e-137
 Identities = 231/274 (84%), Positives = 258/274 (94%)
 Frame = -3

Query: 941 MSILPKSDTIHIREVWNVNLEEEFDLIREIVDDYPYIAMDTEFPGIVLRPVGTFKHSSEY 762
           MS+LPKSD+I IREVWN NLEEEF LIR IVD++P+IAMDTEFPGIVLRPVG FK+S++Y
Sbjct: 1   MSLLPKSDSIQIREVWNDNLEEEFALIRGIVDEFPFIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 761 HYQTLKANVDMLKLIQLGLTFSDENGNLPTCGTDKHCVWQFNFREFNVDDDVFANDSIEL 582
           HYQTLK NVDMLKLIQ+GLTFSDE GNLPTCGTDK+C+WQFNFREFNV++DVFANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQMGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 581 LRQCGMDFKKNVEMGVDAYRFSQLLMTSGIVMNDDVHWVTFHSGYDFGYLLKLLTCQNLP 402
           LRQ G+DF KN E G+DA RF +LLM+SGIV+ND+V+WVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121 LRQSGIDFMKNNEKGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCKNLP 180

Query: 401 DTQTGFFSLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERIGICHQAGSDSLLTS 222
           DTQ GFF+LINMYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+GICHQAGSDSLLTS
Sbjct: 181 DTQAGFFNLINMYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 221 CTFRKLKESFFNGSTEKYAGVLYGLGVENGQNTH 120
           CTFRKLKE+FF+GS EKYAGVLYGLGVENGQNTH
Sbjct: 241 CTFRKLKENFFSGSLEKYAGVLYGLGVENGQNTH 274


>ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|222841274|gb|EEE78821.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  492 bits (1267), Expect = e-137
 Identities = 232/274 (84%), Positives = 256/274 (93%)
 Frame = -3

Query: 941 MSILPKSDTIHIREVWNVNLEEEFDLIREIVDDYPYIAMDTEFPGIVLRPVGTFKHSSEY 762
           MS+LPK D+IHIREVWN NLEEEF LIREIVDD+PYIAMDTEFPGIVLRPVG FK+S++Y
Sbjct: 1   MSLLPKGDSIHIREVWNDNLEEEFALIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 761 HYQTLKANVDMLKLIQLGLTFSDENGNLPTCGTDKHCVWQFNFREFNVDDDVFANDSIEL 582
           HYQTLK NVD+LKLIQLGLTFSD+ GNLPTCGTDK+C+WQFNFREFNV++DVFANDSIEL
Sbjct: 61  HYQTLKDNVDVLKLIQLGLTFSDDQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 581 LRQCGMDFKKNVEMGVDAYRFSQLLMTSGIVMNDDVHWVTFHSGYDFGYLLKLLTCQNLP 402
           LRQ G+D  KN E G+DA RF +LLM+SGIV+ND V+WVTFHSGYDFGYLLKLLTCQNLP
Sbjct: 121 LRQSGIDLNKNNENGIDAVRFGELLMSSGIVLNDSVYWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 401 DTQTGFFSLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERIGICHQAGSDSLLTS 222
           DTQ GFF+LINMYFPT+YDIKHLMKFCNSLHGGLNKLAELL+VERIGICHQAGSDSLLT+
Sbjct: 181 DTQAGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERIGICHQAGSDSLLTA 240

Query: 221 CTFRKLKESFFNGSTEKYAGVLYGLGVENGQNTH 120
           CTFRKLKE+FF+ S EKYAGVLYGLGVENGQ TH
Sbjct: 241 CTFRKLKENFFSCSLEKYAGVLYGLGVENGQITH 274


>ref|XP_002515442.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223545386|gb|EEF46891.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 274

 Score =  489 bits (1258), Expect = e-136
 Identities = 226/273 (82%), Positives = 253/273 (92%)
 Frame = -3

Query: 941 MSILPKSDTIHIREVWNVNLEEEFDLIREIVDDYPYIAMDTEFPGIVLRPVGTFKHSSEY 762
           MSI+PK D+IHIREVWN NLEEEF LIREIVD + Y+AMDTEFPG+VLRPVG FK+ ++Y
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 761 HYQTLKANVDMLKLIQLGLTFSDENGNLPTCGTDKHCVWQFNFREFNVDDDVFANDSIEL 582
           +YQTLK NVDMLKLIQLGLTFSDENGNLPTCGTDK C+WQFNFREFN+ +D+FA+DSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 581 LRQCGMDFKKNVEMGVDAYRFSQLLMTSGIVMNDDVHWVTFHSGYDFGYLLKLLTCQNLP 402
           LRQCG+DFKKN E G+D  RF +L+M+SGIV+ND VHWVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 401 DTQTGFFSLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERIGICHQAGSDSLLTS 222
           DTQ GFF LIN YFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+GICHQAGSDSLLTS
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 221 CTFRKLKESFFNGSTEKYAGVLYGLGVENGQNT 123
           CTFRKL+++FFNGSTEKYAGVLYGLGVENGQNT
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273


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