BLASTX nr result

ID: Coptis24_contig00003170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003170
         (2035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523420.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   100   3e-18
ref|XP_004139803.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...    99   4e-18
ref|XP_002520302.1| conserved hypothetical protein [Ricinus comm...    99   4e-18
ref|XP_002306657.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-18
sp|A9PJQ8.1|NDHM_POPJC RecName: Full=NAD(P)H-quinone oxidoreduct...    99   4e-18

>ref|XP_003523420.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like isoform 1 [Glycine max]
           gi|356509367|ref|XP_003523421.1| PREDICTED:
           NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like isoform 2 [Glycine max]
          Length = 217

 Score = 99.8 bits (247), Expect = 3e-18
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = +3

Query: 3   PLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKPRVIFNNND 155
           PL EYTLRLIGSDIEHYIRK+LYDG IKYNMNAR LNFSMGKPR++FNNND
Sbjct: 158 PLTEYTLRLIGSDIEHYIRKMLYDGAIKYNMNARVLNFSMGKPRIMFNNND 208


>ref|XP_004139803.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like [Cucumis sativus]
           gi|449492622|ref|XP_004159051.1| PREDICTED:
           NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic-like [Cucumis sativus]
          Length = 209

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = +3

Query: 3   PLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKPRVIFNNND 155
           PL EYTLRLIGSDIEHYIRK+LYDGEIKYNMNAR LNFSMGKPR++FN ND
Sbjct: 150 PLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNAND 200


>ref|XP_002520302.1| conserved hypothetical protein [Ricinus communis]
           gi|223540521|gb|EEF42088.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = +3

Query: 3   PLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKPRVIFNNND 155
           PL EYTLRLIGSDIEHYIRKLLYDGEIKYNMNA  LNFSMGKPR++FNN+D
Sbjct: 153 PLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNANVLNFSMGKPRIMFNNDD 203


>ref|XP_002306657.1| predicted protein [Populus trichocarpa] gi|222856106|gb|EEE93653.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +3

Query: 3   PLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKPRVIFNNN 152
           PL EYTLRLIGSDIEHYIRKLLYDGEIKYNMNAR LNFSMGKPR++FNN+
Sbjct: 74  PLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFNND 123


>sp|A9PJQ8.1|NDHM_POPJC RecName: Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|118489619|gb|ABK96611.1| unknown [Populus
           trichocarpa x Populus deltoides]
          Length = 203

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +3

Query: 3   PLAEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARTLNFSMGKPRVIFNNN 152
           PL EYTLRLIGSDIEHYIRKLLYDGEIKYNMNAR LNFSMGKPR++FNN+
Sbjct: 148 PLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFNND 197