BLASTX nr result

ID: Coptis24_contig00003160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003160
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34432.1| CRY [Pisum sativum]                                     73   3e-11
gb|ADQ47608.1| GAI-like protein 1 [Rhoicissus tomentosa]               72   5e-11
gb|ADQ47607.1| GAI-like protein 1 [Rhoicissus tomentosa]               72   5e-11
gb|ABS50249.1| GAI-like gibberellin response modulator [Morus al...    72   5e-11
gb|ABL97888.1| GAI-like protein 1 [Cissus striata subsp. argenti...    72   5e-11

>gb|ABI34432.1| CRY [Pisum sativum]
          Length = 532

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
 Frame = -1

Query: 246 SNHPITDNSELGPSVFDDLRAIPGNAICSSTPNEELGPGPERKRLKLLGSV--TESTRPV 73
           SN     N  +  S  +DL AIPG AI ++T ++     P RKR+K +GS   TESTRPV
Sbjct: 94  SNFDSQPNPSVSSSSDNDLNAIPGKAIYANTDSQTEESLPSRKRVKRVGSSSSTESTRPV 153

Query: 72  VLV-DSQETGIRLVHTLLACAEAVQ 1
           V+V ++QE GI LVHTL+ACAEAV+
Sbjct: 154 VMVVETQEKGIILVHTLMACAEAVE 178


>gb|ADQ47608.1| GAI-like protein 1 [Rhoicissus tomentosa]
          Length = 470

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/97 (50%), Positives = 53/97 (54%), Gaps = 27/97 (27%)
 Frame = -1

Query: 210 PSVFD------DLRAIPGNAICSSTPNEELGPGP------ERKRLKLL------------ 103
           PS+FD      DL+AIPG A+ S        P P      E KRLK              
Sbjct: 66  PSLFDSPSLDYDLKAIPGKALYSHIEQSPQQPPPPPLYQRENKRLKPTTSSTANSVSSVI 125

Query: 102 ---GSVTESTRPVVLVDSQETGIRLVHTLLACAEAVQ 1
              G  TES RPVVLVDSQETGIRLVHTL+ACAEAVQ
Sbjct: 126 GGWGVPTESARPVVLVDSQETGIRLVHTLMACAEAVQ 162


>gb|ADQ47607.1| GAI-like protein 1 [Rhoicissus tomentosa]
          Length = 470

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/97 (50%), Positives = 53/97 (54%), Gaps = 27/97 (27%)
 Frame = -1

Query: 210 PSVFD------DLRAIPGNAICSSTPNEELGPGP------ERKRLKLL------------ 103
           PS+FD      DL+AIPG A+ S        P P      E KRLK              
Sbjct: 66  PSLFDSPSLDYDLKAIPGKALYSHIEQSPQQPPPPPLYQRENKRLKPTTSSIANSVSSVI 125

Query: 102 ---GSVTESTRPVVLVDSQETGIRLVHTLLACAEAVQ 1
              G  TES RPVVLVDSQETGIRLVHTL+ACAEAVQ
Sbjct: 126 GGWGVPTESARPVVLVDSQETGIRLVHTLMACAEAVQ 162


>gb|ABS50249.1| GAI-like gibberellin response modulator [Morus alba var.
           multicaulis]
          Length = 267

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/74 (58%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
 Frame = -1

Query: 195 DLRAIPGNAICSSTPNE----ELGPGPERKRLKLLGSV-----TESTRPVVLVDSQETGI 43
           DL+AIPG AI S TPN           E KRLK    V     T+S RP+VLVDSQE GI
Sbjct: 90  DLKAIPGKAIYSQTPNNLDSSSSSTTRESKRLKPSNDVVSTAATDSNRPIVLVDSQENGI 149

Query: 42  RLVHTLLACAEAVQ 1
           RLVH L+ACAEAVQ
Sbjct: 150 RLVHALMACAEAVQ 163


>gb|ABL97888.1| GAI-like protein 1 [Cissus striata subsp. argentina]
           gi|119713892|gb|ABL97889.1| GAI-like protein 1 [Cissus
           striata subsp. argentina]
          Length = 220

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/97 (51%), Positives = 56/97 (57%), Gaps = 27/97 (27%)
 Frame = -1

Query: 210 PSVFD------DLRAIPGNAICS--STPNEELGPGP----ERKRLKLLGSVT-------- 91
           PS+FD      DL+AIPG A+ S    P ++  P P    E KRLK   S T        
Sbjct: 79  PSLFDSPSLDYDLKAIPGKALYSHIEQPPQQPPPPPLYQRENKRLKPTTSATATSVSSVI 138

Query: 90  -------ESTRPVVLVDSQETGIRLVHTLLACAEAVQ 1
                  ES RPVVLVDSQETGIRLVHTL+ACAEAVQ
Sbjct: 139 GGWGVPTESARPVVLVDSQETGIRLVHTLMACAEAVQ 175


Top