BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003155
         (2038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso...   472   e-130
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2...   462   e-128
ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putativ...   462   e-127
ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779...   447   e-123

>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
            gi|297741413|emb|CBI32544.3| unnamed protein product
            [Vitis vinifera]
          Length = 529

 Score =  472 bits (1214), Expect = e-130
 Identities = 281/511 (54%), Positives = 327/511 (63%), Gaps = 22/511 (4%)
 Frame = +3

Query: 117  FLTAQKLTFISNNKSYYPSARKLEVSHFRXXXXXXXXXXXXXXXVTTDAINQDIGSKDEN 296
            FL  Q L   S+ +   P +RKL V  FR                T  AI      KDE+
Sbjct: 28   FLCGQVLRLPSSRRC--PDSRKLTVLEFRAQATGTTKFSFS----TIGAIQDKADLKDED 81

Query: 297  LVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI-----SDGASAV 461
            L FVAGATG+VGSRTVRELLKLGFRVRAGVR+AQ+AE L+QSVKQ+ +     S+G   V
Sbjct: 82   LAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEGTQPV 141

Query: 462  EKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATV 638
            EKLEIVECDLE+ D+I PA+ NASVV+CCIGASEKEVFD+TGPYRIDY ATKNLIDAATV
Sbjct: 142  EKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATKNLIDAATV 201

Query: 639  AGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPT 818
            A V+HFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVRPGGMERPT
Sbjct: 202  AKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVRPGGMERPT 261

Query: 819  DAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFG 998
            DAYKETHN++LS+EDTLFGGQVSNLQVAEL+AFM KNR  SYCKVVEVIAETTAPL+PFG
Sbjct: 262  DAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPFG 321

Query: 999  ELLSKIPSQWVDRSSVKDSSIKEEEVKPVSS-------FAEDXXXXXXXXXXXXXXYSVY 1157
            ELL+KIPSQ VD S  +  +       PV S         +               Y VY
Sbjct: 322  ELLAKIPSQRVDVSPKESDAADGPAPVPVVSGPPPSTPIEKGPPQGKATAMSPLSPYIVY 381

Query: 1158 DDLKXXXXXXXXXXXXXXNGHVIVVQAV-SEPAIAASQIDVSALTTEARSSTVKLHDTRP 1334
            +DLK                    V  + +EP    S ++  +      +   +   TRP
Sbjct: 382  EDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKEAIQEEAKKTRP 441

Query: 1335 LSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITG-ETPTKVLAEVP 1511
            LSPY VY+DLK         SAP     V+   T      S+  NI+G  T     A++P
Sbjct: 442  LSPYIVYDDLKPPTSPSP--SAP----TVSLPSTLPMEGGSKIDNISGNNTAQPPAADIP 495

Query: 1512 TPKTSY-------LSPYPVYDDLKPPTSPSP 1583
              +  +       LSP+ +Y+DLKPPTSPSP
Sbjct: 496  KDEQHHVQAKPRPLSPFTMYEDLKPPTSPSP 526



 Score = 68.2 bits (165), Expect(2) = 2e-10
 Identities = 46/106 (43%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
 Frame = +3

Query: 1332 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETP-----TKV 1496
            PLSPY VYEDLK           P      A  P  + +P+   S  +   P      K 
Sbjct: 374  PLSPYIVYEDLKPPTSPTP---TPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKE 430

Query: 1497 LAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1634
              +    KT  LSPY VYDDLKPPTSPSP AP VS  ST   E GS
Sbjct: 431  AIQEEAKKTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGS 476



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 1661 YEDLKRPCSPVPSPKQC 1711
            YEDLK P S  PSP QC
Sbjct: 515  YEDLKPPTS--PSPSQC 529


>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  462 bits (1190), Expect(2) = e-128
 Identities = 270/477 (56%), Positives = 321/477 (67%), Gaps = 16/477 (3%)
 Frame = +3

Query: 252  TTDAINQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQ 431
            + +AI++++ +KDENL FVAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE L QSVK+
Sbjct: 58   SVEAISKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALAQSVKE 117

Query: 432  LNIS-DGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQ 605
            + +  +G+  VE+LE VECDLE+ ++I PA+ NASVV+CCIGASEKEVFDVTGP RIDY+
Sbjct: 118  MKLDVEGSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFDVTGPCRIDYR 177

Query: 606  ATKNLIDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYT 785
            ATKNL+DAATVA VDHFI+++SLGTNK GFPAAILNLFWGVLIWKRKAEEALIASG+PYT
Sbjct: 178  ATKNLVDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEEALIASGVPYT 237

Query: 786  IVRPGGMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVI 965
            IVRPGGMERPTDAYKETHN+++S+EDTLFGGQVSNLQVAE MAFM KNR LSYCKVVEVI
Sbjct: 238  IVRPGGMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKVVEVI 297

Query: 966  AETTAPLSPFGELLSKIPSQWVD---------RSSVKDSSIKEEEVKPVSSFAEDXXXXX 1118
            AETTAPL+P  ELL+KIPSQ V+           SV    ++ E   P S    +     
Sbjct: 298  AETTAPLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPSQ--REPAQAK 355

Query: 1119 XXXXXXXXXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEA 1298
                     Y+ Y+DLK                +V  V+AVS           ++   E 
Sbjct: 356  AVVTRPLSPYTAYEDLKPPTSPIPTQPSGKKE-NVNSVEAVSMLDTPDPSPASASGIAET 414

Query: 1299 RSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPT-----NEAVPSSEY 1463
            + + V+    RPLSPY  Y+DLK         +AP  G V    P      N A P++  
Sbjct: 415  KPAPVETKTARPLSPYVAYDDLKPPTSPSP--TAP-VGLVAITAPAVPKTGNSAPPTAAI 471

Query: 1464 SNITGETPTKVLAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1634
             N   E P       P P    LSPYP+YDDLKPPTSPSP AP     +TS+  A S
Sbjct: 472  DNQHHEEPN------PRP----LSPYPIYDDLKPPTSPSPTAPVGLVATTSSINAVS 518



 Score = 26.2 bits (56), Expect(2) = e-128
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 1661 YEDLKRPCSPVPSPK 1705
            YEDLK P SP PS K
Sbjct: 549  YEDLKPPASPTPSLK 563


>ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223541766|gb|EEF43314.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 584

 Score =  462 bits (1190), Expect = e-127
 Identities = 274/528 (51%), Positives = 333/528 (63%), Gaps = 17/528 (3%)
 Frame = +3

Query: 114  TFLTAQKLTFISNNKSYYPSARKLEVSHFRXXXXXXXXXXXXXXXVTTDAINQDIGSKDE 293
            TFL  Q + F S +K  YP ARK+     +                  +AI ++   KD+
Sbjct: 27   TFLHGQLIRFSSFSK--YPHARKIRTFGIKAQASGVTKFSSG----AIEAIPKETDIKDD 80

Query: 294  NLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAVEKL 470
            NL FVAGATG+VGSRTVRELLKLGF+VRAGVRSAQRA+TLVQSVKQ+ +  +GA  +EK 
Sbjct: 81   NLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGAQPIEKF 140

Query: 471  EIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATVAGV 647
            EI+ECDL++ + I  A+ NAS+V+CCIGA EKEVFD TGPYRIDYQAT+NLIDAATVA V
Sbjct: 141  EIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDAATVAKV 200

Query: 648  DHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAY 827
             HFI+++SLGTNK+GFPAAILNLFWGVL WKRKAEEALIASG+PYTIVRPGGMERPTDAY
Sbjct: 201  KHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGMERPTDAY 260

Query: 828  KETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFGELL 1007
            KETHN++LS+EDTLFGGQVSNLQVAELMA M KN DLSYCKVVEVIAETTAPL+   +LL
Sbjct: 261  KETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLTTMDKLL 320

Query: 1008 SKIPSQWVDRSS---------VKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXXXXYSVYD 1160
            ++IPSQ +                + +  E  +P S+  ++              Y+ YD
Sbjct: 321  TRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEPEQPKATVSRPLSPYTAYD 380

Query: 1161 DLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTT---EARSSTVKLHDTR 1331
            DLK              N     V AV++P    +Q   S L +   E++ +TV+     
Sbjct: 381  DLK-PPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQTSSSGLASAIPESKPATVEAKIAG 439

Query: 1332 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVLAEVP 1511
            PLSPY  Y DLK         S  +      A  T +   S+   N          AE P
Sbjct: 440  PLSPYAAYPDLKPPTSPSPKPSGSKE-IPSGASSTEKVESSATGDNDVATITANNDAENP 498

Query: 1512 TPK-TSYLSPYPVYDDLKPPTSPSPYAP--KVSPLSTSTTEAGSLSSP 1646
             P+ +S  SP+ VYDDLKPPTSPSP AP   V P ST+       S+P
Sbjct: 499  PPEFSSGHSPFLVYDDLKPPTSPSPIAPVGSVPPSSTNEVPKAGNSAP 546


>ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  452 bits (1163), Expect = e-124
 Identities = 266/499 (53%), Positives = 324/499 (64%), Gaps = 14/499 (2%)
 Frame = +3

Query: 129  QKLTFISNNKSYYPSARKLEVSHFRXXXXXXXXXXXXXXXVTTDAINQDIGSKDENLVFV 308
            Q L F   NK  +P +RKL++   +                  +A ++++ +KDENL FV
Sbjct: 32   QLLKFPHFNK--FPHSRKLKILDIKAQASVAAKFRSG----AVEADSKEVETKDENLAFV 85

Query: 309  AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAVEKLEIVEC 485
            AGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE LVQSV  + +  +G+  VE+L+IVEC
Sbjct: 86   AGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALVQSVMAMKLDVEGSQPVERLDIVEC 145

Query: 486  DLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATVAGVDHFIL 662
            DLE+ ++I PA+ NASV++CCIGA EKEVFDVTGPYRIDY ATKNL+DAAT   V+HFI+
Sbjct: 146  DLEKPNQIGPALGNASVLLCCIGAGEKEVFDVTGPYRIDYLATKNLVDAATATKVNHFIM 205

Query: 663  LTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHN 842
            ++SLGTNK+GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPGGMERPTDAYKETHN
Sbjct: 206  VSSLGTNKVGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPGGMERPTDAYKETHN 265

Query: 843  VSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFGELLSKIPS 1022
            ++LS+EDTLFGG VSNLQVAELMAFM  NR LSYCKVVEVIAETTAPL+P  ELL+KIPS
Sbjct: 266  ITLSEEDTLFGGLVSNLQVAELMAFMANNRRLSYCKVVEVIAETTAPLTPMDELLAKIPS 325

Query: 1023 QWVDRSSVKDSSIKE-------EEVKPVSSFAEDXXXXXXXXXXXXXXYSVYDDLKXXXX 1181
            Q V+    + + + +       E   P S   ++              Y+ YDDLK    
Sbjct: 326  QRVEPKEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQAKAMVTRPLSPYTAYDDLKPPTS 385

Query: 1182 XXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTVKLHDTRPLSPYFVYED 1361
                            ++AVS+PA   +    +    E +   V+   TRPLSPY  Y D
Sbjct: 386  PTPIQPSSKKES-AGPLEAVSKPATQDTPPMPAPGVAETKPGPVETKTTRPLSPYAAYAD 444

Query: 1362 LKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVLAEV-----PTPKTS 1526
            LK         +AP  G V+    TN AVP       TG     + A +       PK  
Sbjct: 445  LKPPTSPSP--TAP-VGSVIPTSSTN-AVPE------TGNRAPPMAAAIDKQHHTEPKQK 494

Query: 1527 YLSPYPVYDDLKPPTSPSP 1583
             LSPYP+Y+DLKPP SP+P
Sbjct: 495  PLSPYPMYEDLKPPASPTP 513


>ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]
          Length = 528

 Score =  447 bits (1151), Expect = e-123
 Identities = 259/468 (55%), Positives = 311/468 (66%), Gaps = 24/468 (5%)
 Frame = +3

Query: 252  TTDAINQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQ 431
            + + I++   SKD+NLVFVAGATG+VGSRTVREL+KLGFRVRAGVRSAQRA  LVQSV+Q
Sbjct: 69   SAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQ 128

Query: 432  LNI---SDGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRID 599
            L +   S G  AVEKLEIVECDLE+ + I  A+ +AS V+C IGASEKEVFD+TGP+RID
Sbjct: 129  LKLDGASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFRID 188

Query: 600  YQATKNLIDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLP 779
            YQATKNLIDAATVA V+HFIL+TSLGTNKIGFPAAILNLFWGVL+WKRKAEEAL+ASGLP
Sbjct: 189  YQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGLP 248

Query: 780  YTIVRPGGMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVE 959
            YTIVRPGGMERPTDA+KETHN++LS EDTLFGG VSNLQ+AEL+A M KNRDLSYCK+VE
Sbjct: 249  YTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVE 308

Query: 960  VIAETTAPLSPFGELLSKIPSQW----------VDRSSVKDSSIKEEEVKPVSSFAEDXX 1109
             IAETTAPL+P  ELL+KIPSQ           +   SV D       V+P  +  ++  
Sbjct: 309  AIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTVEPKVATQQETA 368

Query: 1110 XXXXXXXXXXXXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIA---ASQIDVS 1280
                        Y VYDDLK                   + + V +P+ +   +S   V 
Sbjct: 369  QPKPVAKQPLSPYIVYDDLK--PPSSPSPSQPGGGKPTKISETVPKPSASDTPSSVPGVD 426

Query: 1281 ALTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSE 1460
             ++    SS V+    +PLSPY  Y DLK          +P    V  + P    VP  E
Sbjct: 427  GISQTTSSSKVE----KPLSPYVAYPDLKPPTS-----PSPNAPTVSVSTPAAAGVP--E 475

Query: 1461 YSNITGETPTKVLA-------EVPTPKTSYLSPYPVYDDLKPPTSPSP 1583
               I+   P ++ A        +P PK+  LSPY +Y+DLKPP SPSP
Sbjct: 476  IDTISSNGPAQLSAADEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSP 523



 Score = 64.7 bits (156), Expect(2) = 4e-09
 Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
 Frame = +3

Query: 1230 VQAVSEPAIAASQIDVSA-LTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPR 1406
            + AVS P   A+ + V   + T+  ++  K    +PLSPY VY+DLK         S+P 
Sbjct: 342  IAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPP-------SSPS 394

Query: 1407 RGFVVAAQPT--NEAVPSSEYSNITGETP-------TKVLAEVPTPKTSYLSPYPVYDDL 1559
                   +PT  +E VP    S+     P       T   ++V  P    LSPY  Y DL
Sbjct: 395  PSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKP----LSPYVAYPDL 450

Query: 1560 KPPTSPSPYAPKVS---PLSTSTTEAGSLSS 1643
            KPPTSPSP AP VS   P +    E  ++SS
Sbjct: 451  KPPTSPSPNAPTVSVSTPAAAGVPEIDTISS 481



 Score = 24.6 bits (52), Expect(2) = 4e-09
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 1661 YEDLKRPCSPVPS 1699
            YEDLK P SP PS
Sbjct: 512  YEDLKPPASPSPS 524