BLASTX nr result
ID: Coptis24_contig00003150
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003150 (872 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284969.1| PREDICTED: ubiquitin-conjugating enzyme E2 v... 273 4e-71 gb|ACF06583.1| ubiquitin-conjugating enzyme 2 [Elaeis guineensis] 269 7e-70 ref|XP_002314791.1| predicted protein [Populus trichocarpa] gi|2... 263 3e-68 gb|ACU14604.1| unknown [Glycine max] 263 5e-68 ref|XP_002312456.1| predicted protein [Populus trichocarpa] gi|2... 261 1e-67 >ref|XP_002284969.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Vitis vinifera] gi|147806487|emb|CAN63218.1| hypothetical protein VITISV_026897 [Vitis vinifera] gi|297737640|emb|CBI26841.3| unnamed protein product [Vitis vinifera] Length = 159 Score = 273 bits (698), Expect = 4e-71 Identities = 128/156 (82%), Positives = 139/156 (89%) Frame = +3 Query: 42 EGSRVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPPNTVHDGRI 221 EGS VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGPPNTVH+GRI Sbjct: 4 EGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRI 63 Query: 222 YQLKLLCDLDYPDKAPTVKFQTRMNMTCVNQETGLVEPSQFPMLADWQRQYTMEDILTQL 401 YQLKL C DYPD PTVKFQTR+NMTCVNQETG+VEPS FPMLA WQR++TMEDILTQL Sbjct: 64 YQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDILTQL 123 Query: 402 KKEMMSPQNRKLTQPPEGNDEQQMDQKGLVLRCCIL 509 KKEMMSPQNRKL QPPEGN+E ++DQKGLVL+CCIL Sbjct: 124 KKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159 >gb|ACF06583.1| ubiquitin-conjugating enzyme 2 [Elaeis guineensis] Length = 159 Score = 269 bits (687), Expect = 7e-70 Identities = 127/156 (81%), Positives = 137/156 (87%) Frame = +3 Query: 42 EGSRVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPPNTVHDGRI 221 EGSRVVVPRNFR RGEKGIGDGTVSYGMDD DDI+MRSWTGTIIGP NTVH+GRI Sbjct: 4 EGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPHNTVHEGRI 63 Query: 222 YQLKLLCDLDYPDKAPTVKFQTRMNMTCVNQETGLVEPSQFPMLADWQRQYTMEDILTQL 401 YQLKL CD DYPD PTV+FQTR+NMTCVNQETG+VEPS FPMLA+WQR+YTMEDIL L Sbjct: 64 YQLKLFCDKDYPDNPPTVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILVNL 123 Query: 402 KKEMMSPQNRKLTQPPEGNDEQQMDQKGLVLRCCIL 509 KKEM S QNRKL QPPEG D+Q+M+QKGLVLRCCIL Sbjct: 124 KKEMSSAQNRKLYQPPEGIDDQRMEQKGLVLRCCIL 159 >ref|XP_002314791.1| predicted protein [Populus trichocarpa] gi|222863831|gb|EEF00962.1| predicted protein [Populus trichocarpa] Length = 159 Score = 263 bits (673), Expect = 3e-68 Identities = 122/156 (78%), Positives = 138/156 (88%) Frame = +3 Query: 42 EGSRVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPPNTVHDGRI 221 EGS VVVPRNFR RGEKGIGDGTVSYGMDD DDIFM+SWTGTIIGPPNTVH+GRI Sbjct: 4 EGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRI 63 Query: 222 YQLKLLCDLDYPDKAPTVKFQTRMNMTCVNQETGLVEPSQFPMLADWQRQYTMEDILTQL 401 YQLKL C +YPD P+V+FQTR+NMTCVN E+G+VEPS FPMLA+WQR++TMEDILTQL Sbjct: 64 YQLKLFCGKEYPDNPPSVRFQTRINMTCVNPESGVVEPSLFPMLANWQREHTMEDILTQL 123 Query: 402 KKEMMSPQNRKLTQPPEGNDEQQMDQKGLVLRCCIL 509 KKEMM+ QNRKL QPPEGN+E ++DQKGLVL+CCIL Sbjct: 124 KKEMMTSQNRKLAQPPEGNEEARLDQKGLVLKCCIL 159 >gb|ACU14604.1| unknown [Glycine max] Length = 159 Score = 263 bits (671), Expect = 5e-68 Identities = 121/156 (77%), Positives = 138/156 (88%) Frame = +3 Query: 42 EGSRVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPPNTVHDGRI 221 EGS VVVPRNFR RGEKGIGDGTVSYGMDD DDI+M+SWTGTIIGPP+TVH+GRI Sbjct: 4 EGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPSTVHEGRI 63 Query: 222 YQLKLLCDLDYPDKAPTVKFQTRMNMTCVNQETGLVEPSQFPMLADWQRQYTMEDILTQL 401 YQLKL C DYPD P+V+FQTR+NMTCVNQETG+VEP FPMLA+W+R+ TMEDIL QL Sbjct: 64 YQLKLFCSRDYPDNPPSVRFQTRINMTCVNQETGVVEPHLFPMLANWKRERTMEDILIQL 123 Query: 402 KKEMMSPQNRKLTQPPEGNDEQQMDQKGLVLRCCIL 509 K+EMMSPQNRKLTQPPEGN+E ++DQKGLV+RCCI+ Sbjct: 124 KREMMSPQNRKLTQPPEGNEESRVDQKGLVVRCCIV 159 >ref|XP_002312456.1| predicted protein [Populus trichocarpa] gi|222852276|gb|EEE89823.1| predicted protein [Populus trichocarpa] Length = 159 Score = 261 bits (668), Expect = 1e-67 Identities = 121/156 (77%), Positives = 137/156 (87%) Frame = +3 Query: 42 EGSRVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPPNTVHDGRI 221 EGS VVVPRNFR RGEKGIG+GTVSYGMDD DDI+M+SWTGTIIGPPNTVH+GRI Sbjct: 4 EGSSVVVPRNFRLLEELERGEKGIGNGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRI 63 Query: 222 YQLKLLCDLDYPDKAPTVKFQTRMNMTCVNQETGLVEPSQFPMLADWQRQYTMEDILTQL 401 YQLKL C DYPD P+V+FQTR+NM CVN +G+VEPS FPMLA+WQR+ TMEDILTQL Sbjct: 64 YQLKLFCGKDYPDNPPSVRFQTRINMACVNPASGMVEPSLFPMLANWQRECTMEDILTQL 123 Query: 402 KKEMMSPQNRKLTQPPEGNDEQQMDQKGLVLRCCIL 509 KKEMM+PQNRKLTQPPEGN+E ++DQKGLVL+CCIL Sbjct: 124 KKEMMAPQNRKLTQPPEGNEEARLDQKGLVLKCCIL 159