BLASTX nr result

ID: Coptis24_contig00003143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003143
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   159   8e-37
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]      158   2e-36
gb|ABK95155.1| unknown [Populus trichocarpa]                          158   2e-36
emb|CBI31948.3| unnamed protein product [Vitis vinifera]              157   4e-36

>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  159 bits (402), Expect = 8e-37
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +1

Query: 241 PSEDQRRDRIILINPLTQGMIVIESSRNLETLFREFASKDGPKPASKSSIEAMEKVVIGE 420
           P      +RIILINP TQGM+VIE + +LE+L R+  +K G  PASK+SIEAM KV IGE
Sbjct: 50  PQTTDPNERIILINPFTQGMVVIEGAASLESLLRDIGNKKGQPPASKASIEAMPKVEIGE 109

Query: 421 EEKDKECAICLDGWEIGDEAKAMPCKHKYHEKCIEKWLGIHGSCPVCRHKMPVD 582
           + KD ECAICL+ WE+G   K MPCKH++H  C+EKWL IHG+CPVCR+KMPVD
Sbjct: 110 DNKDGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKIHGNCPVCRYKMPVD 163


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  158 bits (399), Expect = 2e-36
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +1

Query: 241 PSEDQRRDRIILINPLTQGMIVIESSRNLETLFREFASKDGPKPASKSSIEAMEKVVIGE 420
           P      +RIILINPLTQGM+VIE + +LE+L R+  +K+G  PASK+SIEAM  V IGE
Sbjct: 49  PQTTDPNERIILINPLTQGMVVIEGAASLESLLRDIGNKNGQPPASKASIEAMPSVEIGE 108

Query: 421 EEKDKECAICLDGWEIGDEAKAMPCKHKYHEKCIEKWLGIHGSCPVCRHKMPVD 582
           + KD ECAICL+ WE G   K MPCKH++H  C+EKWL IHG+CPVCR+KMPVD
Sbjct: 109 DNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVD 162


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score =  158 bits (399), Expect = 2e-36
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +1

Query: 241 PSEDQRRDRIILINPLTQGMIVIESSRNLETLFREFASKDGPKPASKSSIEAMEKVVIGE 420
           P      +RIILINPLTQGM+VIE + +LE+L R+  +K+G  PASK+SIEAM  V IGE
Sbjct: 49  PQTTDPNERIILINPLTQGMVVIEGAASLESLLRDMGNKNGQPPASKASIEAMPSVEIGE 108

Query: 421 EEKDKECAICLDGWEIGDEAKAMPCKHKYHEKCIEKWLGIHGSCPVCRHKMPVD 582
           + KD ECAICL+ WE G   K MPCKH++H  C+EKWL IHG+CPVCR+KMPVD
Sbjct: 109 DNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVD 162


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score =  158 bits (399), Expect = 2e-36
 Identities = 71/114 (62%), Positives = 87/114 (76%)
 Frame = +1

Query: 241 PSEDQRRDRIILINPLTQGMIVIESSRNLETLFREFASKDGPKPASKSSIEAMEKVVIGE 420
           P      +RIILINPLTQGM+VIE + +LE+L R+  +K+G  PASK+SIEAM  V IGE
Sbjct: 36  PQTTDPNERIILINPLTQGMVVIEGAASLESLLRDIGNKNGQPPASKASIEAMPSVEIGE 95

Query: 421 EEKDKECAICLDGWEIGDEAKAMPCKHKYHEKCIEKWLGIHGSCPVCRHKMPVD 582
           + KD ECAICL+ WE G   K MPCKH++H  C+EKWL IHG+CPVCR+KMPVD
Sbjct: 96  DNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIHGNCPVCRYKMPVD 149


>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  157 bits (396), Expect = 4e-36
 Identities = 73/108 (67%), Positives = 85/108 (78%)
 Frame = +1

Query: 259 RDRIILINPLTQGMIVIESSRNLETLFREFASKDGPKPASKSSIEAMEKVVIGEEEKDKE 438
           RDRIILINP TQGMIVIE + + ++L RE ASK G  PA+K+SIEAM  V +G +  D E
Sbjct: 175 RDRIILINPFTQGMIVIEGNSSFDSLLRELASKGGQPPATKASIEAMPSVEVGGD--DGE 232

Query: 439 CAICLDGWEIGDEAKAMPCKHKYHEKCIEKWLGIHGSCPVCRHKMPVD 582
           C ICL+ W++G  AK MPCKHK+HE CI KWLGIHGSCPVCRHKMPVD
Sbjct: 233 CVICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHGSCPVCRHKMPVD 280


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