BLASTX nr result

ID: Coptis24_contig00003141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003141
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270339.1| PREDICTED: uncharacterized protein LOC100241...   164   1e-38
ref|XP_002330940.1| predicted protein [Populus trichocarpa] gi|1...   156   4e-36
emb|CAN80447.1| hypothetical protein VITISV_013098 [Vitis vinifera]   153   3e-35
ref|XP_002331268.1| predicted protein [Populus trichocarpa] gi|1...   152   5e-35
ref|XP_004140735.1| PREDICTED: uncharacterized protein LOC101206...   145   1e-32

>ref|XP_002270339.1| PREDICTED: uncharacterized protein LOC100241624 [Vitis vinifera]
           gi|296087204|emb|CBI33578.3| unnamed protein product
           [Vitis vinifera]
          Length = 116

 Score =  164 bits (416), Expect = 1e-38
 Identities = 83/118 (70%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = -2

Query: 690 MEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSAD 511
           ME  ++  Q DG+ P+  +KSMPS QEEE AVKK+YGGI+PKKPPLISKDHERA+FDSAD
Sbjct: 1   MENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFDSAD 60

Query: 510 WALGKQGTPVEKPKGPLEALRPKLQPTXXXXXXXXXSYAPSDGEDGGNS-SEDATTNE 340
           WALGKQG  VEKPKGPLEALRPKLQPT          YAPSDGEDGG+S +ED  TNE
Sbjct: 61  WALGKQG--VEKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGEDGGSSPAEDMATNE 116


>ref|XP_002330940.1| predicted protein [Populus trichocarpa] gi|118483473|gb|ABK93635.1|
           unknown [Populus trichocarpa]
           gi|118483822|gb|ABK93803.1| unknown [Populus
           trichocarpa] gi|222873134|gb|EEF10265.1| predicted
           protein [Populus trichocarpa]
          Length = 115

 Score =  156 bits (395), Expect = 4e-36
 Identities = 84/119 (70%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
 Frame = -2

Query: 690 MEGGKEERQADGDFPEQPDKS-MPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSA 514
           ME G  + Q +G+  E  DKS MPS ++EEEAVKKKYGGI+PKKPPLISKDHERAFFDSA
Sbjct: 1   MEDGNMQEQVNGNLSE--DKSCMPSYKQEEEAVKKKYGGIMPKKPPLISKDHERAFFDSA 58

Query: 513 DWALGKQGTPVEKPKGPLEALRPKLQPTXXXXXXXXXSYAPSDGEDGGNS-SEDATTNE 340
           DWALGKQG   EKPKGPLEALRPKLQPT          YAP+DGEDGG++ SEDAT NE
Sbjct: 59  DWALGKQG--AEKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDGGSAPSEDATANE 115


>emb|CAN80447.1| hypothetical protein VITISV_013098 [Vitis vinifera]
          Length = 110

 Score =  153 bits (387), Expect = 3e-35
 Identities = 75/107 (70%), Positives = 85/107 (79%)
 Frame = -2

Query: 699 LTGMEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFD 520
           ++GME  ++  Q DG+ P+  +KSMPS QEEE AVKK+YGGI+PKKPPLISKDHERA+FD
Sbjct: 1   MSGMENVEQHEQVDGNGPDNAEKSMPSSQEEEAAVKKRYGGIMPKKPPLISKDHERAYFD 60

Query: 519 SADWALGKQGTPVEKPKGPLEALRPKLQPTXXXXXXXXXSYAPSDGE 379
           SADWALGKQG  VEKPKGPLEALRPKLQPT          YAPSDGE
Sbjct: 61  SADWALGKQG--VEKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGE 105


>ref|XP_002331268.1| predicted protein [Populus trichocarpa] gi|118485324|gb|ABK94521.1|
           unknown [Populus trichocarpa]
           gi|222873693|gb|EEF10824.1| predicted protein [Populus
           trichocarpa]
          Length = 114

 Score =  152 bits (385), Expect = 5e-35
 Identities = 81/118 (68%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = -2

Query: 690 MEGGKEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSAD 511
           ME  K++ Q DG+  E    SMPS ++EEE VKKKYGGI+PKKPPLISKDHERA+FDSAD
Sbjct: 1   MEDNKQD-QVDGNLSEDKS-SMPSSKQEEEVVKKKYGGILPKKPPLISKDHERAYFDSAD 58

Query: 510 WALGKQGTPVEKPKGPLEALRPKLQPTXXXXXXXXXSYAPSDGEDGGN-SSEDATTNE 340
           WALGKQG  V+KPKGPLEALRPKLQPT          YAP+DGED G+ SSEDAT NE
Sbjct: 59  WALGKQG--VDKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDAGSASSEDATANE 114


>ref|XP_004140735.1| PREDICTED: uncharacterized protein LOC101206373 isoform 1 [Cucumis
           sativus]
          Length = 117

 Score =  145 bits (365), Expect = 1e-32
 Identities = 76/114 (66%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -2

Query: 678 KEERQADGDFPEQPDKSMPSPQEEEEAVKKKYGGIVPKKPPLISKDHERAFFDSADWALG 499
           KE  +  GD     ++SM S ++EEE +KKKYGGIVPKKPPLISKDHERA+FDSADWALG
Sbjct: 6   KEAERVGGDGHVGSEESMSSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSADWALG 65

Query: 498 KQGTPVEKPKGPLEALRPKLQPTXXXXXXXXXSYAPSDGEDGGNS-SEDATTNE 340
           KQG  VEKPKGPLEALRPKLQPT           APSDGEDGG + +E AT+NE
Sbjct: 66  KQG--VEKPKGPLEALRPKLQPTQQQTRYRKSPCAPSDGEDGGTAQNEYATSNE 117


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