BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003137
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   345   5e-93
emb|CBI39605.3| unnamed protein product [Vitis vinifera]              341   1e-91
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   341   1e-91
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]   341   1e-91
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   337   2e-90

>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  345 bits (886), Expect = 5e-93
 Identities = 164/249 (65%), Positives = 195/249 (78%)
 Frame = -1

Query: 790  FHAMKPVYGVEPAVEHYGCVVDILGRAGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHG 611
            F++M+ VYG+EP +EHYGCVVD+LGRAG L EAEE +  MPM+ +AAVWGALLGACR HG
Sbjct: 417  FNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476

Query: 610  NXXXXXXXXXXXXXLDPQNSGRYALLSNIYAKAGRWDGLAQVRKLMKEMGIKTTPGSSSI 431
            +             L+PQNSGRYALLSNIYA+AGRWD +A VRKLMKE G+KT+ G S I
Sbjct: 477  DVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMI 536

Query: 430  NLDGVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYVPNTTLVLFDIVEEEKETALCY 251
            + DGV+H F MGDGSH QMK +YLML+ +++RL+ EG+ PNT+ VLFDI EEEKE  L Y
Sbjct: 537  DFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQY 596

Query: 250  HSEKLAIAFGILNTTPGATIRIVNNLRVCEDCHTVTKLISHAYKREIIVQDRLRYHHFKN 71
            HSEKLAIAFG++NT PG TI +V NLR+CEDCH+  KLIS  Y REIIV+DR RYHHFK 
Sbjct: 597  HSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKT 656

Query: 70   GKCSCSDFW 44
            G CSC DFW
Sbjct: 657  GTCSCKDFW 665


>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  341 bits (874), Expect = 1e-91
 Identities = 161/250 (64%), Positives = 198/250 (79%), Gaps = 1/250 (0%)
 Frame = -1

Query: 790  FHAMKPVYGVEPAVEHYGCVVDILGRAGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHG 611
            F++M+  YGVEP +EHYGC+VD+LGRAG LTEAE+ +  +P +   AVWGALLGACR HG
Sbjct: 375  FNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 434

Query: 610  NXXXXXXXXXXXXXLDPQNSGRYALLSNIYAKAGRWDGLAQVRKLMKEMGIKTTPGSSSI 431
            N             L+PQNSGRY LLSNIYAKAGRW+ + +VRKLMKE GIKTTPG+S I
Sbjct: 435  NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 494

Query: 430  NLD-GVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYVPNTTLVLFDIVEEEKETALC 254
            +L  G +H+F++GDGSH Q+K++Y ML+++ ERL+ EGY P+ + VLFDI EEEKETA+ 
Sbjct: 495  DLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVW 554

Query: 253  YHSEKLAIAFGILNTTPGATIRIVNNLRVCEDCHTVTKLISHAYKREIIVQDRLRYHHFK 74
             HSEKLAI FG++NT+PG TIRIV NLRVCEDCH+ TKLIS  Y REIIV+DR+RYHHF+
Sbjct: 555  QHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFR 614

Query: 73   NGKCSCSDFW 44
            NG CSC DFW
Sbjct: 615  NGACSCKDFW 624


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
            isoform 1 [Vitis vinifera]
          Length = 672

 Score =  341 bits (874), Expect = 1e-91
 Identities = 161/250 (64%), Positives = 198/250 (79%), Gaps = 1/250 (0%)
 Frame = -1

Query: 790  FHAMKPVYGVEPAVEHYGCVVDILGRAGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHG 611
            F++M+  YGVEP +EHYGC+VD+LGRAG LTEAE+ +  +P +   AVWGALLGACR HG
Sbjct: 423  FNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 482

Query: 610  NXXXXXXXXXXXXXLDPQNSGRYALLSNIYAKAGRWDGLAQVRKLMKEMGIKTTPGSSSI 431
            N             L+PQNSGRY LLSNIYAKAGRW+ + +VRKLMKE GIKTTPG+S I
Sbjct: 483  NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 542

Query: 430  NLD-GVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYVPNTTLVLFDIVEEEKETALC 254
            +L  G +H+F++GDGSH Q+K++Y ML+++ ERL+ EGY P+ + VLFDI EEEKETA+ 
Sbjct: 543  DLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVW 602

Query: 253  YHSEKLAIAFGILNTTPGATIRIVNNLRVCEDCHTVTKLISHAYKREIIVQDRLRYHHFK 74
             HSEKLAI FG++NT+PG TIRIV NLRVCEDCH+ TKLIS  Y REIIV+DR+RYHHF+
Sbjct: 603  QHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFR 662

Query: 73   NGKCSCSDFW 44
            NG CSC DFW
Sbjct: 663  NGACSCKDFW 672


>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  341 bits (874), Expect = 1e-91
 Identities = 161/250 (64%), Positives = 198/250 (79%), Gaps = 1/250 (0%)
 Frame = -1

Query: 790  FHAMKPVYGVEPAVEHYGCVVDILGRAGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHG 611
            F++M+  YGVEP +EHYGC+VD+LGRAG LTEAE+ +  +P +   AVWGALLGACR HG
Sbjct: 424  FNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 483

Query: 610  NXXXXXXXXXXXXXLDPQNSGRYALLSNIYAKAGRWDGLAQVRKLMKEMGIKTTPGSSSI 431
            N             L+PQNSGRY LLSNIYAKAGRW+ + +VRKLMKE GIKTTPG+S I
Sbjct: 484  NVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 543

Query: 430  NLD-GVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYVPNTTLVLFDIVEEEKETALC 254
            +L  G +H+F++GDGSH Q+K++Y ML+++ ERL+ EGY P+ + VLFDI EEEKETA+ 
Sbjct: 544  DLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVW 603

Query: 253  YHSEKLAIAFGILNTTPGATIRIVNNLRVCEDCHTVTKLISHAYKREIIVQDRLRYHHFK 74
             HSEKLAI FG++NT+PG TIRIV NLRVCEDCH+ TKLIS  Y REIIV+DR+RYHHF+
Sbjct: 604  QHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFR 663

Query: 73   NGKCSCSDFW 44
            NG CSC DFW
Sbjct: 664  NGACSCKDFW 673


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  337 bits (864), Expect = 2e-90
 Identities = 160/249 (64%), Positives = 193/249 (77%)
 Frame = -1

Query: 790  FHAMKPVYGVEPAVEHYGCVVDILGRAGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHG 611
            F  M+  YGV+P +EHYGC+VD+LGR+G  +EAE+ I  MPMK NAAVWGALLGACRIHG
Sbjct: 418  FQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477

Query: 610  NXXXXXXXXXXXXXLDPQNSGRYALLSNIYAKAGRWDGLAQVRKLMKEMGIKTTPGSSSI 431
            N             L+PQNSGRY LLSNIYAK GR+D ++++RKLMK+ GIKT PG S +
Sbjct: 478  NFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIV 537

Query: 430  NLDGVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYVPNTTLVLFDIVEEEKETALCY 251
            +L+G +H F MGDGSH QMKE+Y  L+ I ERL+  G+ P+T+ VLFDI EEEKETA+ Y
Sbjct: 538  DLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNY 597

Query: 250  HSEKLAIAFGILNTTPGATIRIVNNLRVCEDCHTVTKLISHAYKREIIVQDRLRYHHFKN 71
            HSEKLAIAFG++NT PG  I IV NLRVC+DCH+ TKLIS  + REIIV+DR+RYHHFKN
Sbjct: 598  HSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKN 657

Query: 70   GKCSCSDFW 44
            G CSC DFW
Sbjct: 658  GTCSCKDFW 666