BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003132
         (1784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   273   1e-70
ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-68
ref|XP_002517194.1| protein binding protein, putative [Ricinus c...   259   2e-66
ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|2...   258   4e-66
gb|ABR18468.1| unknown [Picea sitchensis]                             245   3e-62

>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
            gi|297737001|emb|CBI26202.3| unnamed protein product
            [Vitis vinifera]
          Length = 391

 Score =  273 bits (697), Expect = 1e-70
 Identities = 159/323 (49%), Positives = 194/323 (60%), Gaps = 1/323 (0%)
 Frame = +3

Query: 243  CSICLEPFSSNDPATVTNCKHDYHLQCILEWSQRSKECPICWQLLVLKDPASQELLAAVG 422
            CSICLEPFS++DPAT+TNC+H+YHLQCILEWSQRSKECPICWQ LVL+DP SQELLAAV 
Sbjct: 29   CSICLEPFSTDDPATITNCRHEYHLQCILEWSQRSKECPICWQFLVLQDPTSQELLAAVE 88

Query: 423  IEXXXXXXXXXXXXXXXXXIPSEDSDSD-DLSYAEDSDFNEHIMQHLTAAALXXXXXXXX 599
             E                     D   D D SY++DSD +EHIMQH+ AAA         
Sbjct: 89   GERSPRSRNSSPTESTFLHHFQGDFGYDHDASYSDDSDLDEHIMQHVVAAA-SGAPYVHR 147

Query: 600  XXXXXXXGMDPLRFHVFSASSDNSNIQQXXXXXXXXXXXXXXXXXXXXXXQRDIESTDLG 779
                   G+ P    VF  + D  ++Q                           +S  + 
Sbjct: 148  RERQRSSGLGPSESLVFPPT-DVPDVQTINTPSPEEYQNSGSVSSESNSPAHSDQSA-IN 205

Query: 780  FQPTTYVLSPPVDTGSNIRDDRHSPLRPGVFASHTLPGSPQRSRPSELLSFSETLKSKFS 959
             QP +  +   V+  S+   +R    +P V     LP SP+R  PS+LLSFS+++KS+ S
Sbjct: 206  AQPLSSGVPSVVNMVSSTAANRDGLAKPRVIFDQPLPSSPRRPSPSDLLSFSDSIKSRLS 265

Query: 960  AASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNS 1139
            AASARYKES++K TRGFKEKLL+RNNSVKELSK VQRE+SAGIA V RM+ERLDP  K +
Sbjct: 266  AASARYKESISKGTRGFKEKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPILKRT 325

Query: 1140 GNSSPVSGRAEGTSNVSQNGKGV 1208
            G S+P S    GTSNVS  GKGV
Sbjct: 326  GASNPDSSFTGGTSNVSHKGKGV 348


>ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|222863759|gb|EEF00890.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  266 bits (680), Expect = 1e-68
 Identities = 155/322 (48%), Positives = 192/322 (59%)
 Frame = +3

Query: 243  CSICLEPFSSNDPATVTNCKHDYHLQCILEWSQRSKECPICWQLLVLKDPASQELLAAVG 422
            CSICL+PF++ DPATVT C H+YHLQCILEWSQRSKECPICWQLLVLKD ASQELLAAV 
Sbjct: 45   CSICLDPFTAQDPATVTCCNHEYHLQCILEWSQRSKECPICWQLLVLKDHASQELLAAVE 104

Query: 423  IEXXXXXXXXXXXXXXXXXIPSEDSDSDDLSYAEDSDFNEHIMQHLTAAALXXXXXXXXX 602
             E                 +  +D D +  SY++DSDF+EHIMQHL AAA          
Sbjct: 105  TERLLRSRNSTPASMIVPHL-DDDYDIEQDSYSDDSDFDEHIMQHLAAAASSRAHHVHER 163

Query: 603  XXXXXXGMDPLRFHVFSASSDNSNIQQXXXXXXXXXXXXXXXXXXXXXXQRDIESTDLGF 782
                  G+ P +   F++    + +QQ                          ++  +  
Sbjct: 164  ERQRSNGLGPSQVIAFTSPEHVATVQQTCTSPEEGQTLIHGSSVINSPTP---DTLSVNV 220

Query: 783  QPTTYVLSPPVDTGSNIRDDRHSPLRPGVFASHTLPGSPQRSRPSELLSFSETLKSKFSA 962
            Q  + V  P V+  S      +SP +P +        +PQ    SE+LS S+++KSK+ A
Sbjct: 221  QNLSSVTPPDVNQVSTTA--VNSPFKPRILFRQPPTDTPQEQGSSEVLSLSDSIKSKWFA 278

Query: 963  ASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSG 1142
            ASARYK+SL+KSTRG KEKL+ARNNSVKELSKEVQRE+SAGIAGVARM+ERLD T+K +G
Sbjct: 279  ASARYKDSLSKSTRGIKEKLVARNNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTG 338

Query: 1143 NSSPVSGRAEGTSNVSQNGKGV 1208
             S   SG    TSN S  GKGV
Sbjct: 339  PSMSDSGFTGATSNFSWKGKGV 360


>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
            gi|223543829|gb|EEF45357.1| protein binding protein,
            putative [Ricinus communis]
          Length = 414

 Score =  259 bits (661), Expect = 2e-66
 Identities = 161/325 (49%), Positives = 194/325 (59%), Gaps = 3/325 (0%)
 Frame = +3

Query: 243  CSICLEPFSSNDPATVTNCKHDYHLQCILEWSQRSKECPICWQLLVLKDPASQELLAAVG 422
            CSICLEPF+S +P+TVT+CKH+YHLQCILEWSQRSKECPICWQLLVL++PA QELLAAV 
Sbjct: 54   CSICLEPFTSQNPSTVTSCKHEYHLQCILEWSQRSKECPICWQLLVLQEPACQELLAAVE 113

Query: 423  IEXXXXXXXXXXXXXXXXXIPSEDSDSDDLSYAEDSDFNEHIMQHLTAAALXXXXXXXXX 602
             E                    ED D +  SY++DSDF+E IMQHL A A          
Sbjct: 114  TERRLRSRNTPSAAFSNPTRFHEDIDVEQDSYSDDSDFDERIMQHLAAVA-SRARYICRR 172

Query: 603  XXXXXXGMDPLRFHVFSASSDNSNIQQXXXXXXXXXXXXXXXXXXXXXXQRDIESTDLGF 782
                  G  P R  +F + ++  + QQ                      Q     +  G 
Sbjct: 173  ERQRSSGQGPSRALIFPSPTNEPSAQQ--------------THTSAVEGQDVYYGSSRGN 218

Query: 783  QPTTYVLS---PPVDTGSNIRDDRHSPLRPGVFASHTLPGSPQRSRPSELLSFSETLKSK 953
              T+ + S   P VDT  + +D    P  P   A       PQ S  SE LSFSE++KSK
Sbjct: 219  SATSLLESQSLPSVDTAVS-KDVSSKPRPPSTVA-------PQTS--SEGLSFSESMKSK 268

Query: 954  FSAASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSK 1133
            + AAS+RYKES++KST+G KEKLLARNNSVKELS+ VQRE+SAGIAGVARM ERLD T K
Sbjct: 269  WVAASSRYKESISKSTQGIKEKLLARNNSVKELSRGVQREMSAGIAGVARMFERLDLTPK 328

Query: 1134 NSGNSSPVSGRAEGTSNVSQNGKGV 1208
             +G SSPVSG  EGTS +S  GKG+
Sbjct: 329  RTGASSPVSGCREGTSELSLKGKGM 353


>ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|222852336|gb|EEE89883.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  258 bits (659), Expect = 4e-66
 Identities = 156/323 (48%), Positives = 188/323 (58%), Gaps = 1/323 (0%)
 Frame = +3

Query: 243  CSICLEPFSSNDPATVTNCKHDYHLQCILEWSQRSKECPICWQLLVLKDPASQELLAAVG 422
            CSICL+PF+  DPAT T CKH+YHLQCI+EWSQRSKECPICWQLLVLKDPASQELLAAV 
Sbjct: 4    CSICLDPFTPQDPATDTCCKHEYHLQCIVEWSQRSKECPICWQLLVLKDPASQELLAAVE 63

Query: 423  IEXXXXXXXXXXXXXXXXXIPSEDSDSDDLSYAEDSDFNEHIMQHLTAAALXXXXXXXXX 602
             E                 +  ED D +  SY++DSDF++H+MQHL+A+A          
Sbjct: 64   TERLFRPRNSNPASMIVHHL-DEDYDVEQDSYSDDSDFDDHVMQHLSASAASRARYVCKR 122

Query: 603  XXXXXXGMDPLRFHVFSASSDNSNIQQXXXXXXXXXXXXXXXXXXXXXXQRDIESTDLGF 782
                  G+ P +  VF++    S +QQ                          E   L +
Sbjct: 123  ERHRSTGLGPSQVLVFTSPEHVSTVQQTCTSPE--------------------EGQILSY 162

Query: 783  QPTTYVLSPPVDTGSNIRD-DRHSPLRPGVFASHTLPGSPQRSRPSELLSFSETLKSKFS 959
              +    S P      I++    +P  P +         PQ    S+L S SE++KSK+ 
Sbjct: 163  GSSVINSSTPGTPSVKIQNLSSVAPPVPPI-------DPPQGQGSSDLSSLSESIKSKWF 215

Query: 960  AASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNS 1139
            AASARYKESL+K TRG KEKLLARNNSVKELSKEVQRE+SAGIAGVARM+ERLD TSK +
Sbjct: 216  AASARYKESLSKGTRGMKEKLLARNNSVKELSKEVQREMSAGIAGVARMIERLDLTSKRA 275

Query: 1140 GNSSPVSGRAEGTSNVSQNGKGV 1208
            G S   S    GTSN S  GKGV
Sbjct: 276  GPSMSDSDFTRGTSNFSWKGKGV 298


>gb|ABR18468.1| unknown [Picea sitchensis]
          Length = 423

 Score =  245 bits (625), Expect = 3e-62
 Identities = 147/322 (45%), Positives = 184/322 (57%), Gaps = 9/322 (2%)
 Frame = +3

Query: 243  CSICLEPFSSNDPATVTNCKHDYHLQCILEWSQRSKECPICWQLLVLKDPASQELLAAVG 422
            CSICLEPF+ NDPATVT+CKH+YHLQCILEWSQRSKECP+C ++L+LKDPASQELLAAV 
Sbjct: 30   CSICLEPFTDNDPATVTSCKHEYHLQCILEWSQRSKECPMCLRILILKDPASQELLAAVE 89

Query: 423  IEXXXXXXXXXXXXXXXXXIPSEDSDSDDLSYAEDSDFNEHIMQHLTAAAL--XXXXXXX 596
             E                    E       +Y +DSDF E IMQHL AAA+         
Sbjct: 90   QERSFRLSRSPNTPIFARNSVDEIEFHHVPAYTDDSDFEERIMQHLAAAAMGRAHHFSRR 149

Query: 597  XXXXXXXXGMDPLRFHVFSASSD-----NSNIQQXXXXXXXXXXXXXXXXXXXXXXQRDI 761
                    G    +F VFS   +      +NI+                       +  +
Sbjct: 150  ENLRHRSSGQGHPQFLVFSTHPNAPPISPNNIEAQDGNIPTFTSLDSTTPAMTATSEEQL 209

Query: 762  ESTDLGFQPTTYVLSPPVDTGSNIR--DDRHSPLRPGVFASHTLPGSPQRSRPSELLSFS 935
            +   L   P         +TG  ++  D+R  P  P   A    P + QRSRPS+  SFS
Sbjct: 210  QQGPLPSPPGQMNSRANRNTGIAVQGLDNRSEPFTPRNNAGQQSPENQQRSRPSDFQSFS 269

Query: 936  ETLKSKFSAASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVER 1115
            E+ KS+F+A S RYKES+++STRGFKEK  ARNN+V EL +EVQREVSAGIAGVAR++ER
Sbjct: 270  ESFKSRFNAVSTRYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIAGVARIMER 329

Query: 1116 LDPTSKNSGNSSPVSGRAEGTS 1181
            LDP+SKN+G S+  S   EG+S
Sbjct: 330  LDPSSKNNGASA--SDNMEGSS 349