BLASTX nr result
ID: Coptis24_contig00003112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003112
(2753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 289 3e-75
ref|XP_002514013.1| transcription factor, putative [Ricinus comm... 274 1e-70
ref|XP_003518251.1| PREDICTED: transcription factor bHLH145-like... 251 1e-63
ref|XP_004152745.1| PREDICTED: transcription factor bHLH145-like... 240 2e-60
emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera] 233 2e-58
>ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 289 bits (739), Expect = 3e-75
Identities = 202/469 (43%), Positives = 246/469 (52%), Gaps = 10/469 (2%)
Frame = -2
Query: 2389 MVSQAASQTKFRALKHESGVAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT*IASCCL 2210
MV QAASQT+FRALKHE+G+AGSATI+VRVIACFQPLQDCQ P
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQVSRICFTXFP--------- 51
Query: 2209 FVCTNQVEVRCXXXXXXXXXXRQQLHTNPA*RSSGYYCGWMGKDTGSWQHQQCPPHQAPN 2030
G G M KD GSW Q P +P+
Sbjct: 52 ----------------------------------GDRLGLMEKDCGSWLPHQHPGWLSPD 77
Query: 2029 LKCKSFAP---DSGWPNAFPACARPCTGLVSANETIPGCVSSNPPRFKAGLANVPRGWFY 1859
L S AP + N A PC LV + ++ S P + N P GWFY
Sbjct: 78 LNTLS-APLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNEPHGWFY 136
Query: 1858 GLPCYRQALTPIHVHSPKDPDTNADGYKRNATLNA---VSRPVEKKYIVFDHSGNQTRLI 1688
LP +RQA T K+ A Y + +NA +S +K+++VFD SG+QT L+
Sbjct: 137 CLPRFRQAFTHASNSILKEK-LPAGPYGNSRVVNAPNVISECAQKRFLVFDQSGDQTTLV 195
Query: 1687 FSPATGYPIQCPRFGNPSEVDNGGL-GIEWKTKTRHFYKDCQIFFDGLVEKPEDQETGEE 1511
FS G P QC +P L G E TK Y I D E E+ T +
Sbjct: 196 FSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTD---ESNENGGTDVQ 252
Query: 1510 SEMHEDTEELNALLYXXXXXXXXXXXXXXXEISTGHSPSKMTGHMKQE--VASAEEVASS 1337
SEMHEDTEELNALLY STGHSPS MT + +QE AEEVASS
Sbjct: 253 SEMHEDTEELNALLYSDDEYSYSEDDEET---STGHSPSTMTVYDRQEWLEGEAEEVASS 309
Query: 1336 GGGNCKRKRLLDDVYSASSLMDTASSGKPNGSSEYEDDAESCCGE-SKIHGEEFSSLPTN 1160
G N KR++L + ++ SLMDTASS KP+ S EYEDDAES C + + E S N
Sbjct: 310 DGSN-KRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 368
Query: 1159 KRLKREKIRETVNILQNIIPGGKDMDAILVLDEAIQYLRSLKLKAKSLG 1013
KR ++++IRETVNILQ++IPGGK DAI+VLDEAI YL+SLKLKAK+LG
Sbjct: 369 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALG 417
>ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor,
putative [Ricinus communis]
Length = 424
Score = 274 bits (700), Expect = 1e-70
Identities = 190/466 (40%), Positives = 239/466 (51%), Gaps = 7/466 (1%)
Frame = -2
Query: 2389 MVSQAASQTKFRALKHESGVAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT*IASCCL 2210
MV QAASQT FRALKHE+G+AGSATI+VRVIACFQPLQDCQ + + +
Sbjct: 1 MVCQAASQTNFRALKHENGIAGSATIIVRVIACFQPLQDCQKQ------------VNNGI 48
Query: 2209 FVCTNQVEVRCXXXXXXXXXXRQQLHTNPA*RSSGYYCGWMGKDTGSWQHQQCPPHQAPN 2030
+ C N + G GWMG+D GS +Q Q+ N
Sbjct: 49 YYCRNPL---------------------------GDCFGWMGEDWGSCYPRQQFDWQSSN 81
Query: 2029 LKCKSFAPDSGWPNAFPACARPCTGLVSANETIPGCVSSNPPRFKAGLANVPRGWFYGLP 1850
L + P+ P + +VS T+P S +PP AN P GWFY LP
Sbjct: 82 LNYLGAPFNVEHHRTIPSVMNPGSDMVSIKGTLPAYPSFDPPYSFVAQANEPHGWFYCLP 141
Query: 1849 CYRQALTPIHVHSPKD--PDTNADGYKRNATLNAVSRPVEKKYIVFDHSGNQTRLIFSPA 1676
+R A P K+ P K T S +K+++VFD SG+QT LIFS
Sbjct: 142 RFRHAFAPSLNSGFKERLPAAANGNNKEVFTPKVESGCSQKRFLVFDQSGDQTTLIFSSG 201
Query: 1675 TGYPIQCPRFGNPSEVDNGGLGIEWKTKTRHFYKDCQIFFDGLVEKPEDQETGEE--SEM 1502
G P+ P F + G + K + ++ I + + G + SEM
Sbjct: 202 IGTPV--PGFTSWGRKPTGACNL--KREDPGTKENLNIHLRAIAPDQLGENDGADLQSEM 257
Query: 1501 HEDTEELNALLYXXXXXXXXXXXXXXXEISTGHSPSKMTGHMKQE--VASAEEVASSGGG 1328
HEDT+ELNALLY STGHSPS MT H Q+ S EEVASSGG
Sbjct: 258 HEDTDELNALLYSDDDSDYTEDDEVT---STGHSPSTMTAHNNQDWFKGSTEEVASSGGS 314
Query: 1327 NCKRKRLLDDVYSASSLMDTASSGKPNGSSEYEDDAESCCGESKIHGE-EFSSLPTNKRL 1151
KRK +LMDTA+S KP S EYE+DAES C + E S +NK++
Sbjct: 315 TKKRKLFDGGFSDVPALMDTANSVKPVISFEYENDAESRCDDGLYWASSEMGSESSNKKM 374
Query: 1150 KREKIRETVNILQNIIPGGKDMDAILVLDEAIQYLRSLKLKAKSLG 1013
++EKIR+TVNILQNIIPGGK DAI+VLDEAI YL+SLK+KAK+LG
Sbjct: 375 RKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALG 420
>ref|XP_003518251.1| PREDICTED: transcription factor bHLH145-like [Glycine max]
Length = 429
Score = 251 bits (640), Expect = 1e-63
Identities = 189/481 (39%), Positives = 238/481 (49%), Gaps = 22/481 (4%)
Frame = -2
Query: 2389 MVSQAASQTKFRALKHESGVAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT*IASCCL 2210
MV QAASQT+FRALKHE+G AGS+TI+VRVIACFQPL DCQAEYFRHLLKPVT
Sbjct: 1 MVCQAASQTRFRALKHENGYAGSSTIIVRVIACFQPLTDCQAEYFRHLLKPVT------- 53
Query: 2209 FVCTNQVEVRCXXXXXXXXXXRQQLHTNPA*RSSGYYCGWMGKDTGSWQHQQCPPHQAPN 2030
+LH N WQ +PN
Sbjct: 54 -------------------TWIPELHFN-------------------WQ--------SPN 67
Query: 2029 LKCKSFAPDS-GWPNAFPACARPCTGLVSANETIPGCVSSNPPRFKAGLANVPRGWFYGL 1853
L + P G N A +V+ N +P SS P + G + P GWFY L
Sbjct: 68 LSSFNATPFGVGKQNGTSAAMNSGANVVTRNAAMPAYASSALPHSQLGHSGEPHGWFYCL 127
Query: 1852 PCYRQALT-PIHVHSPKD--PDTNADGYKRNATLNAVSRPVEKKYIVFDHSGNQTRLIFS 1682
P +RQ T P + ++ P +A+G N S +K+ +V D +G+QT L++S
Sbjct: 128 PRFRQGFTTPAQTFNAEEKLPAGHANGLGVEVAPNRESGFPQKQLLVIDQTGDQTTLVYS 187
Query: 1681 PATGYPIQC-----PRFGNPSEVDNGGLGIEWKTKTRHFYKDCQIFFDGLVEKPEDQETG 1517
G P+ C + ++NG + + H D V + +
Sbjct: 188 SRFGGPVDCHVSWDSKLHGSINLNNGNELLNLRRDVNHVV-GLGPTLDDKVHENTGTDDD 246
Query: 1516 EESEMHEDTEELNALLYXXXXXXXXXXXXXXXEISTGHSPSKMTGHMKQEVA----SAEE 1349
ESEMHEDTEE+NALLY STGHSPS MT H + +AEE
Sbjct: 247 IESEMHEDTEEINALLYSDSDGYSTEDDDDDEVTSTGHSPSTMTTHDDNQEEPHRRTAEE 306
Query: 1348 VASSGGGNCKRKRLLDDVYSASSL--MDTASSGKPNGSS---EYEDDAESCC---GESKI 1193
VASS G KRK LLD Y +L MDTASS NG E EDDAES C G S
Sbjct: 307 VASSVGETKKRK-LLDGAYDDDNLQFMDTASS--LNGKKRPFEVEDDAESRCSSGGNSSS 363
Query: 1192 HGEE-FSSLPTNKRLKREKIRETVNILQNIIPGGKDMDAILVLDEAIQYLRSLKLKAKSL 1016
G SL NK++++EKI++ ++ILQ I+PGGKD D I +LDEAI+ L+SLKLKA L
Sbjct: 364 RGSGGMGSLSGNKKMRKEKIQDVLSILQCIVPGGKDKDPIELLDEAIRCLKSLKLKAIEL 423
Query: 1015 G 1013
G
Sbjct: 424 G 424
>ref|XP_004152745.1| PREDICTED: transcription factor bHLH145-like [Cucumis sativus]
gi|449521814|ref|XP_004167924.1| PREDICTED: transcription
factor bHLH145-like [Cucumis sativus]
Length = 482
Score = 240 bits (612), Expect = 2e-60
Identities = 178/488 (36%), Positives = 237/488 (48%), Gaps = 29/488 (5%)
Frame = -2
Query: 2389 MVSQAASQTKFRALKHESGVAGSATIVVRVIACFQPLQDCQAEYFRHLLKPVT*IASCCL 2210
MV QAA+QT+FR LKHE+G+AGSATI+VRVIACFQPLQDCQAEYFR + +
Sbjct: 1 MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRRISAFILSWRLLLF 60
Query: 2209 FVCTNQVEVRCXXXXXXXXXXR----QQLHTNPA*RSSGYYCG----------------W 2090
F+ E + P C W
Sbjct: 61 FLILKDTETAIASFQRPLSGMFYFYSSSVFVGPFPLLQFLACSIFQIFRVSFVQVNCFDW 120
Query: 2089 MGKDTGSWQHQQCP----PHQAPNLKCKSFAPDSGWPNAFPACARPCTGLVSANETIPGC 1922
MG+ +W+ + P + L S AP+ G PN + +V N T P
Sbjct: 121 MGE---AWEAGRPPRLLFDWEPSLLNSFSAAPNLGRPNLVASSIS--NNMVMKNGTFPVS 175
Query: 1921 VSSNPPRFKAGLANVPRGWFYGLPCYRQALTPIH--VHSPKDPDTNADGYKRNATLNAVS 1748
+ P+ + GL N PR W + L +QA P+ +++ + K + S
Sbjct: 176 SALKVPQPQVGLVNEPRSWLHCLGPSQQATLPVKSPIYNDNLVAQSKGLLKEDVAPLCGS 235
Query: 1747 RPVEKKYIVFDHSGNQTRLIFSPATGYPIQCPRFGNPSEVDNGGLGIEWKTKTRHFYKDC 1568
+K ++V D S ++T L+ G P+Q +P E + F D
Sbjct: 236 GTQQKGFLVIDQSADKTTLVLCSGVGGPLQLLTSWSPQPSAAYKFNGEDTRNKQDFIYDS 295
Query: 1567 QIFFDGLVEKPEDQETGEESEMHEDTEELNALLYXXXXXXXXXXXXXXXEISTGHSPSKM 1388
+ + E+ ET E+SEM EDTEELNALLY STGHSPS M
Sbjct: 296 KPVLSN--DFAENHETDEQSEMQEDTEELNALLYSEDESEFDEDEDEVT--STGHSPSAM 351
Query: 1387 TGHMKQEVASA--EEVASSGGGNCKRKRLLDDVYSASSLMDTASSGKPNGSSEYEDDAES 1214
T K+ EEVASS G KRK +D + S+MDTASS P S EYEDDAES
Sbjct: 352 TTKDKRYPCEEMNEEVASSAGSTKKRK--IDGGFDVMSVMDTASSPMPRRSPEYEDDAES 409
Query: 1213 CCGESKIHG-EEFSSLPTNKRLKREKIRETVNILQNIIPGGKDMDAILVLDEAIQYLRSL 1037
CG E+ S NK++++EKIRETV IL+++IPGGK +AI+VLDEAIQYL+SL
Sbjct: 410 NCGNVGSQDIEDVDSSSINKKIRKEKIRETVGILESLIPGGKGKEAIVVLDEAIQYLKSL 469
Query: 1036 KLKAKSLG 1013
+LKA++ G
Sbjct: 470 RLKAETFG 477
>emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 233 bits (595), Expect = 2e-58
Identities = 161/367 (43%), Positives = 202/367 (55%), Gaps = 10/367 (2%)
Frame = -2
Query: 2083 KDTGSWQHQQCPPHQAPNLKCKSFAP---DSGWPNAFPACARPCTGLVSANETIPGCVSS 1913
+D GSW Q P +P+L S AP + N A PC LV + ++ S
Sbjct: 41 QDCGSWLPHQHPGWLSPDLNTLS-APLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFS 99
Query: 1912 NPPRFKAGLANVPRGWFYGLPCYRQALTPIHVHSPKDPDTNADGYKRNATLNA---VSRP 1742
P + N P GWFY LP +RQA T K+ A Y + +NA +S
Sbjct: 100 VLPHSRPSQPNEPHGWFYCLPRFRQAFTHASNSILKEK-LPAGPYGNSRVVNAPNVISEC 158
Query: 1741 VEKKYIVFDHSGNQTRLIFSPATGYPIQCPRFGNPSEVDNGGL-GIEWKTKTRHFYKDCQ 1565
+K+++VFD SG+QT L+FS G P QC +P L G E TK Y
Sbjct: 159 AQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGP 218
Query: 1564 IFFDGLVEKPEDQETGEESEMHEDTEELNALLYXXXXXXXXXXXXXXXEISTGHSPSKMT 1385
I D E E+ T +SEMHEDTEELNALLY STGHSPS MT
Sbjct: 219 ILTD---ESNENGGTDVQSEMHEDTEELNALLYSDDEYSYSEDDEET---STGHSPSTMT 272
Query: 1384 GHMKQE--VASAEEVASSGGGNCKRKRLLDDVYSASSLMDTASSGKPNGSSEYEDDAESC 1211
+ +QE AEEVASS G N KR++L + ++ SLMDTASS KP+ S EYEDDAES
Sbjct: 273 VYDRQEWLEGEAEEVASSDGSN-KRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESS 331
Query: 1210 CGE-SKIHGEEFSSLPTNKRLKREKIRETVNILQNIIPGGKDMDAILVLDEAIQYLRSLK 1034
C + + E S NKR ++++IRETVNILQ++IPGGK DAI+VLDEAI YL+SLK
Sbjct: 332 CADGNNPEPGEIQSFSGNKRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLK 391
Query: 1033 LKAKSLG 1013
LKAK+LG
Sbjct: 392 LKAKALG 398
Score = 78.2 bits (191), Expect = 1e-11
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = -2
Query: 2389 MVSQAASQTKFRALKHESGVAGSATIVVRVIACFQPLQDCQ 2267
MV QAASQT+FRALKHE+G+AGSATI+VRVIACFQPLQDCQ
Sbjct: 1 MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41