BLASTX nr result
ID: Coptis24_contig00003108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003108
(1457 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis v... 149 7e-94
ref|XP_002516039.1| protein with unknown function [Ricinus commu... 148 5e-93
ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycin... 147 5e-93
sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7 gi... 150 6e-93
ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatul... 148 8e-93
>ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|297743251|emb|CBI36118.3| unnamed protein product
[Vitis vinifera]
Length = 207
Score = 149 bits (376), Expect(4) = 7e-94
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +2
Query: 473 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 652
SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM
Sbjct: 34 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 93
Query: 653 KSFENLNNWRE 685
KSF+NLNNWRE
Sbjct: 94 KSFDNLNNWRE 104
Score = 144 bits (363), Expect(4) = 7e-94
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 781 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 960
QASPSDPENFPFVVLGNK+DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA
Sbjct: 109 QASPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 168
Query: 961 FECIAKNALK 990
F+CIAKNALK
Sbjct: 169 FQCIAKNALK 178
Score = 80.5 bits (197), Expect(4) = 7e-94
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 282 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 401
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 40
Score = 40.8 bits (94), Expect(4) = 7e-94
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 1106 ETIDVAGGGRQQRSSGCEC 1162
+TIDVA GGRQQRSSGCEC
Sbjct: 189 DTIDVASGGRQQRSSGCEC 207
>ref|XP_002516039.1| protein with unknown function [Ricinus communis]
gi|223544944|gb|EEF46459.1| protein with unknown
function [Ricinus communis]
Length = 207
Score = 148 bits (373), Expect(4) = 5e-93
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +2
Query: 473 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 652
SNQYKATIGADFLTKEVQFED+LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM
Sbjct: 34 SNQYKATIGADFLTKEVQFEDKLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 93
Query: 653 KSFENLNNWRE 685
KSF+NLNNWRE
Sbjct: 94 KSFDNLNNWRE 104
Score = 143 bits (360), Expect(4) = 5e-93
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = +1
Query: 781 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 960
QASPSDPENFPFVVLGNK+DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+AA
Sbjct: 109 QASPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAA 168
Query: 961 FECIAKNALK 990
F+CIAKNALK
Sbjct: 169 FQCIAKNALK 178
Score = 80.5 bits (197), Expect(4) = 5e-93
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 282 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 401
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 40
Score = 40.4 bits (93), Expect(4) = 5e-93
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 1106 ETIDVAGGGRQQRSSGCEC 1162
+TIDV GGGRQQRS+GCEC
Sbjct: 189 DTIDVGGGGRQQRSTGCEC 207
>ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycine max]
gi|356521867|ref|XP_003529572.1| PREDICTED: ras-related
protein Rab7-like [Glycine max]
gi|1370188|emb|CAA98171.1| RAB7D [Lotus japonicus]
gi|255626709|gb|ACU13699.1| unknown [Glycine max]
Length = 207
Score = 147 bits (371), Expect(4) = 5e-93
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +2
Query: 473 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 652
SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM
Sbjct: 34 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 93
Query: 653 KSFENLNNWRE 685
KSF+NLN+WRE
Sbjct: 94 KSFDNLNHWRE 104
Score = 144 bits (362), Expect(4) = 5e-93
Identities = 67/70 (95%), Positives = 70/70 (100%)
Frame = +1
Query: 781 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 960
QASPSDPENFPFVVLGNK+DVDGGNSRV+SEKKAKAWCASKGNIPYFETSAKEGFNVEAA
Sbjct: 109 QASPSDPENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAA 168
Query: 961 FECIAKNALK 990
F+CIAKNALK
Sbjct: 169 FQCIAKNALK 178
Score = 80.5 bits (197), Expect(4) = 5e-93
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 282 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 401
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 40
Score = 40.4 bits (93), Expect(4) = 5e-93
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 1106 ETIDVAGGGRQQRSSGCEC 1162
+TIDV GGGRQQRS+GCEC
Sbjct: 189 DTIDVGGGGRQQRSTGCEC 207
>sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7 gi|2317874|gb|AAB71504.1|
Rab7 GTP binding protein [Prunus armeniaca]
Length = 207
Score = 150 bits (379), Expect(4) = 6e-93
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +2
Query: 473 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 652
SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM
Sbjct: 34 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 93
Query: 653 KSFENLNNWRE 685
KSFENLNNWRE
Sbjct: 94 KSFENLNNWRE 104
Score = 137 bits (346), Expect(4) = 6e-93
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +1
Query: 781 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 960
QA+PSDPENFPFVVLGNK+DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+ A
Sbjct: 109 QATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDA 168
Query: 961 FECIAKNAL 987
F+CIAKNAL
Sbjct: 169 FQCIAKNAL 177
Score = 80.5 bits (197), Expect(4) = 6e-93
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 282 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 401
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 40
Score = 43.1 bits (100), Expect(4) = 6e-93
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 1106 ETIDVAGGGRQQRSSGCEC 1162
+TIDVAGGGRQQRSSGCEC
Sbjct: 189 DTIDVAGGGRQQRSSGCEC 207
>ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatula]
gi|217075638|gb|ACJ86179.1| unknown [Medicago
truncatula] gi|355505539|gb|AES86681.1| Ras-related
protein Rab7 [Medicago truncatula]
gi|388494386|gb|AFK35259.1| unknown [Medicago
truncatula]
Length = 207
Score = 148 bits (374), Expect(4) = 8e-93
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +2
Query: 473 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 652
SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM
Sbjct: 34 SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM 93
Query: 653 KSFENLNNWRE 685
KSFENLN+WRE
Sbjct: 94 KSFENLNHWRE 104
Score = 144 bits (363), Expect(4) = 8e-93
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 781 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 960
QASPSDPENFPFVVLGNK+DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA
Sbjct: 109 QASPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA 168
Query: 961 FECIAKNALK 990
F+CIAKNALK
Sbjct: 169 FQCIAKNALK 178
Score = 80.5 bits (197), Expect(4) = 8e-93
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 282 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 401
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKAT 40
Score = 38.1 bits (87), Expect(4) = 8e-93
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 1106 ETIDVAGGGRQQRSSGCEC 1162
+TIDV GGRQQRS+GCEC
Sbjct: 189 DTIDVGNGGRQQRSTGCEC 207