BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003101
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   135   8e-30
gb|ABK95217.1| unknown [Populus trichocarpa]                          133   4e-29
ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   132   7e-29
emb|CBI34952.3| unnamed protein product [Vitis vinifera]              129   5e-28
ref|XP_002283368.1| PREDICTED: RING-H2 finger protein ATL48 [Vit...   128   1e-27

>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score =  135 bits (340), Expect = 8e-30
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = +1

Query: 184 MEKMGTSETEFDDLFNQKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARV 363
           MEKMGT+++E D LF QKKRV+NP VPIGAL+TAGVLTAGLISF++GNS LGQKLMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 364 VVQGATVALMVGTAYYYGEK 423
           VVQGATVALM+ TAYYYGEK
Sbjct: 61  VVQGATVALMLSTAYYYGEK 80


>gb|ABK95217.1| unknown [Populus trichocarpa]
          Length = 86

 Score =  133 bits (334), Expect = 4e-29
 Identities = 65/79 (82%), Positives = 73/79 (92%)
 Frame = +1

Query: 184 MEKMGTSETEFDDLFNQKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARV 363
           MEKMGT+E  F+ LF +KKRVRNP VP+GAL+TAGVLTAGLISFR+GNSQLGQ LMRARV
Sbjct: 1   MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60

Query: 364 VVQGATVALMVGTAYYYGE 420
           VVQGATVALMVGTA+YYG+
Sbjct: 61  VVQGATVALMVGTAFYYGD 79


>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  132 bits (332), Expect = 7e-29
 Identities = 66/76 (86%), Positives = 70/76 (92%)
 Frame = +1

Query: 193 MGTSETEFDDLFNQKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 372
           MG+ E  F+D   +KKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 373 GATVALMVGTAYYYGE 420
           GATVALMVGTAYYYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>emb|CBI34952.3| unnamed protein product [Vitis vinifera]
          Length = 77

 Score =  129 bits (325), Expect = 5e-28
 Identities = 63/77 (81%), Positives = 71/77 (92%)
 Frame = +1

Query: 193 MGTSETEFDDLFNQKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 372
           MGT+++E D LF QKKRV+NP VPIGAL+TAGVLTAGLISF++GNS LGQKLMRARVVVQ
Sbjct: 1   MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 60

Query: 373 GATVALMVGTAYYYGEK 423
           GATVALM+ TAYYYGEK
Sbjct: 61  GATVALMLSTAYYYGEK 77


>ref|XP_002283368.1| PREDICTED: RING-H2 finger protein ATL48 [Vitis vinifera]
          Length = 78

 Score =  128 bits (321), Expect = 1e-27
 Identities = 62/77 (80%), Positives = 70/77 (90%)
 Frame = +1

Query: 193 MGTSETEFDDLFNQKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 372
           M TSE   ++L NQKKR++NP VP+GAL+TAGVLTAGL+SFRQGNS+LGQ LMRARVVVQ
Sbjct: 1   MSTSEPHMENLLNQKKRIKNPLVPVGALMTAGVLTAGLVSFRQGNSRLGQLLMRARVVVQ 60

Query: 373 GATVALMVGTAYYYGEK 423
           GATVALMVGTAYYYGEK
Sbjct: 61  GATVALMVGTAYYYGEK 77