BLASTX nr result

ID: Coptis24_contig00003090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003090
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145998.1| PREDICTED: choline-phosphate cytidylyltransf...   469   e-130
emb|CAN64609.1| hypothetical protein VITISV_019065 [Vitis vinifera]   459   e-127
ref|XP_003631247.1| PREDICTED: choline-phosphate cytidylyltransf...   457   e-126
ref|XP_002307859.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002323169.1| predicted protein [Populus trichocarpa] gi|2...   455   e-125

>ref|XP_004145998.1| PREDICTED: choline-phosphate cytidylyltransferase B-like [Cucumis
            sativus] gi|449519894|ref|XP_004166969.1| PREDICTED:
            choline-phosphate cytidylyltransferase B-like [Cucumis
            sativus]
          Length = 332

 Score =  469 bits (1206), Expect = e-130
 Identities = 223/260 (85%), Positives = 242/260 (93%)
 Frame = -3

Query: 1098 DPPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHRYKGKTVMTE 919
            D PTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNT+LLVGCCNDETTH++KGKTVM E
Sbjct: 37   DHPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTFLLVGCCNDETTHKFKGKTVMNE 96

Query: 918  DERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKS 739
             ERYESLRHC+WVDEVIPDAPWV+SQEF+DKHKID+VAHDSLPYADASGAGKDVYEFVK 
Sbjct: 97   AERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYADASGAGKDVYEFVKK 156

Query: 738  IGKFKETQRTEGISTSDIIMRMLKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMSLK 559
            IGKFKET+RTEGISTSDIIMR++KDYNQYV+RNLDRGY+RK+LGVS+VKEKRLRVNM LK
Sbjct: 157  IGKFKETKRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSFVKEKRLRVNMRLK 216

Query: 558  KLRDKAKEHQEKVGEKILQIQTVAKTAGMHRNEWVENADRWIVGFLGMFEEGCHKMGTAI 379
            KL++K KEHQEKVGEK   IQTVAKTAGMHRNEWVENADRW+ GFL MFEEGCHKMGTAI
Sbjct: 217  KLQEKVKEHQEKVGEK---IQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAI 273

Query: 378  RDRIQERLKGQNSGGLLQDG 319
            RDRIQERLKG      + +G
Sbjct: 274  RDRIQERLKGAQQLKYISNG 293


>emb|CAN64609.1| hypothetical protein VITISV_019065 [Vitis vinifera]
          Length = 331

 Score =  459 bits (1181), Expect = e-127
 Identities = 222/251 (88%), Positives = 234/251 (93%)
 Frame = -3

Query: 1086 DRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHRYKGKTVMTEDERY 907
            D  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTH++KGKTVM E ERY
Sbjct: 33   DGLVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMNEVERY 92

Query: 906  ESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKSIGKF 727
            ESLRHC+WVDEVIPDAPWVL+QEFLDKHKIDYVAHDSLPYADASGAG DVYEFVKSIGKF
Sbjct: 93   ESLRHCKWVDEVIPDAPWVLTQEFLDKHKIDYVAHDSLPYADASGAGNDVYEFVKSIGKF 152

Query: 726  KETQRTEGISTSDIIMRMLKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMSLKKLRD 547
            KET+RT+GISTSDIIMR++KDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNM LKKL++
Sbjct: 153  KETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMRLKKLQE 212

Query: 546  KAKEHQEKVGEKILQIQTVAKTAGMHRNEWVENADRWIVGFLGMFEEGCHKMGTAIRDRI 367
            K KE QEKV +K   IQ VAKTAGMHRNEWVENADRW+ GFL MFEEGCHKMGTAIRDRI
Sbjct: 213  KVKEQQEKVEQK---IQXVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRI 269

Query: 366  QERLKGQNSGG 334
            QERL GQ SGG
Sbjct: 270  QERLMGQQSGG 280


>ref|XP_003631247.1| PREDICTED: choline-phosphate cytidylyltransferase B-like isoform 1
            [Vitis vinifera] gi|297738012|emb|CBI27213.3| unnamed
            protein product [Vitis vinifera]
          Length = 289

 Score =  457 bits (1177), Expect = e-126
 Identities = 221/254 (87%), Positives = 235/254 (92%)
 Frame = -3

Query: 1083 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHRYKGKTVMTEDERYE 904
            +PVRVYADGIYDLFHFGHARSLEQAKK FPNTYLLVGCCNDE TH+YKGKTVMT  ERYE
Sbjct: 9    KPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEVTHKYKGKTVMTGSERYE 68

Query: 903  SLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKSIGKFK 724
            SLRHCRWVDEVIPDAPWVL+QEF+DKH+IDYVAHDSLPYADASGAGKDVYEFVKSIGKFK
Sbjct: 69   SLRHCRWVDEVIPDAPWVLTQEFIDKHEIDYVAHDSLPYADASGAGKDVYEFVKSIGKFK 128

Query: 723  ETQRTEGISTSDIIMRMLKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMSLKKLRDK 544
            ET+RT+GISTSDIIMR++KDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNM LKKL +K
Sbjct: 129  ETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMGLKKLHEK 188

Query: 543  AKEHQEKVGEKILQIQTVAKTAGMHRNEWVENADRWIVGFLGMFEEGCHKMGTAIRDRIQ 364
             K+HQEKVGEK   IQ VAKTAGMHRNEWVENADR++ GFL MFEE CHKMGTAIRDRIQ
Sbjct: 189  VKKHQEKVGEK---IQIVAKTAGMHRNEWVENADRFVAGFLEMFEESCHKMGTAIRDRIQ 245

Query: 363  ERLKGQNSGGLLQD 322
            E+LK Q   GLL D
Sbjct: 246  EQLKRQQLRGLLYD 259


>ref|XP_002307859.1| predicted protein [Populus trichocarpa] gi|222853835|gb|EEE91382.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  456 bits (1173), Expect = e-126
 Identities = 217/259 (83%), Positives = 238/259 (91%)
 Frame = -3

Query: 1095 PPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHRYKGKTVMTED 916
            PP+DRPVRVYADGIYDLFHFGHARSLEQAKK+FPNTYLLVGCCNDE TH+YKGKTVMTE+
Sbjct: 30   PPSDRPVRVYADGIYDLFHFGHARSLEQAKKAFPNTYLLVGCCNDEITHKYKGKTVMTEE 89

Query: 915  ERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKSI 736
            ERYESLRHC+WVDEVIP APWV+ QEFLDKH IDYVAHDSLPYADASGAGKDVYEFVK +
Sbjct: 90   ERYESLRHCKWVDEVIPGAPWVIDQEFLDKHNIDYVAHDSLPYADASGAGKDVYEFVKKV 149

Query: 735  GKFKETQRTEGISTSDIIMRMLKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMSLKK 556
            G+FKET+RT+GISTSDIIMR++KDYNQYV+RNLDRGY+RK+LGVSYVKEKRLRVNM LKK
Sbjct: 150  GRFKETRRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNMRLKK 209

Query: 555  LRDKAKEHQEKVGEKILQIQTVAKTAGMHRNEWVENADRWIVGFLGMFEEGCHKMGTAIR 376
            L++K KEHQEKVGEK    Q VA    MHRNEWVENADRW+ GFL MFEEGCHKMGTAIR
Sbjct: 210  LQEKVKEHQEKVGEK---FQIVA----MHRNEWVENADRWVAGFLEMFEEGCHKMGTAIR 262

Query: 375  DRIQERLKGQNSGGLLQDG 319
            DRIQE L+GQ S GLL++G
Sbjct: 263  DRIQEGLRGQLSNGLLENG 281


>ref|XP_002323169.1| predicted protein [Populus trichocarpa] gi|222867799|gb|EEF04930.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  455 bits (1171), Expect = e-125
 Identities = 219/263 (83%), Positives = 240/263 (91%)
 Frame = -3

Query: 1107 AVLDPPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHRYKGKTV 928
            + L P +DRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND+TTH+YKGKTV
Sbjct: 18   STLPPSSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDDTTHKYKGKTV 77

Query: 927  MTEDERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEF 748
            MTEDERYESLRHC+WVDEVIPDAPWV+ QEFLDKH IDYVAHDSLPYADASGAGKDVYEF
Sbjct: 78   MTEDERYESLRHCKWVDEVIPDAPWVIDQEFLDKHNIDYVAHDSLPYADASGAGKDVYEF 137

Query: 747  VKSIGKFKETQRTEGISTSDIIMRMLKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNM 568
            VK +G+FKET+RT+GISTSDIIMR++KDYNQYV+RNLDRGY+RK+LGVSYVKEKRLRVNM
Sbjct: 138  VKKVGRFKETKRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKRLRVNM 197

Query: 567  SLKKLRDKAKEHQEKVGEKILQIQTVAKTAGMHRNEWVENADRWIVGFLGMFEEGCHKMG 388
             LKKL++K KE QEKVGEKI QI T      MHRNEWVENADR + GFL MFEEGCHKMG
Sbjct: 198  RLKKLQEKVKEQQEKVGEKI-QIVT------MHRNEWVENADRLVAGFLEMFEEGCHKMG 250

Query: 387  TAIRDRIQERLKGQNSGGLLQDG 319
            TAIRDRIQERL+GQ S  LL++G
Sbjct: 251  TAIRDRIQERLRGQQSSRLLENG 273


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