BLASTX nr result

ID: Coptis24_contig00003075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003075
         (1926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18373.3| unnamed protein product [Vitis vinifera]              440   e-121
ref|XP_002330451.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117
ref|XP_004156905.1| PREDICTED: uncharacterized protein LOC101230...   428   e-117
ref|XP_004145626.1| PREDICTED: uncharacterized protein LOC101203...   428   e-117
ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   425   e-116

>emb|CBI18373.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  440 bits (1132), Expect = e-121
 Identities = 219/363 (60%), Positives = 275/363 (75%), Gaps = 6/363 (1%)
 Frame = +1

Query: 238  VIVLLFLFIWH------TLKRSNSFSSKRLGSTTSQIIPTTETRIADIVSDSDLRCLVNN 399
            ++ +L + +WH      + +  +S +S     + S + P  + RI++IV D+DL+ L++N
Sbjct: 1    MVAVLVIILWHLGRLIFSARFRSSSNSTPTSLSASAVNP--QFRISEIVGDADLKTLIDN 58

Query: 400  LDGIYEEEVKWDDVVDRKNNMLSYTAKCCKPKDGPLKYMSVTIFENCSVERLRDFYMDNE 579
            LD       +WD+VVD++NN +SY AKCCKPKDGPLKY+SVT+FENCS E LRDFYMD++
Sbjct: 59   LDEKLNLNERWDNVVDKRNNFVSYNAKCCKPKDGPLKYVSVTVFENCSTEMLRDFYMDSD 118

Query: 580  YRVQWDKTMVDHVQLQVDDTNGIEIGRTVKKFPLLTPREYVLAWRLWEGKEKTYYCFTRE 759
            YR QWDK +++H QLQVD++NG EIGRT+KK PLLTPREYVLAWRLWEGK+KT+YCF +E
Sbjct: 119  YRKQWDKMVLEHEQLQVDESNGTEIGRTIKKLPLLTPREYVLAWRLWEGKDKTFYCFIKE 178

Query: 760  CEHSMAPRQKKYVRVGYFRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLLFSKGIWS 939
            CEH +A RQK+YVRV +FRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKL F+KGIWS
Sbjct: 179  CEHPLASRQKRYVRVSFFRSGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLAFAKGIWS 238

Query: 940  YVCKMDAALRKYTRVCNPQSSSIITAVTCMQKVPSELDTTTITNCQPSERSSTSGFAIQE 1119
            YVCKMD ALRKY+ + N Q  S ++A+T +QKVP  L+  TI + + S    TS  + Q 
Sbjct: 239  YVCKMDNALRKYSAIHNSQQGSAVSAITLIQKVPPGLE--TINSRESSSHLETSAASGQG 296

Query: 1120 TEVRGKTLMRRPSKKMVANGLLLLGGVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQA 1299
             +   +   RRPSKK+VANGLLLL GV CLSRGH  LGA VAMA ILKKLT+  A   Q+
Sbjct: 297  NK---RKFSRRPSKKLVANGLLLL-GVFCLSRGHPPLGANVAMAYILKKLTKRGATPSQS 352

Query: 1300 GRS 1308
            G+S
Sbjct: 353  GQS 355


>ref|XP_002330451.1| predicted protein [Populus trichocarpa] gi|222871863|gb|EEF08994.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  429 bits (1103), Expect = e-117
 Identities = 209/340 (61%), Positives = 265/340 (77%)
 Frame = +1

Query: 277  KRSNSFSSKRLGSTTSQIIPTTETRIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKN 456
            + S SFSS    +T    I ++ +R+++IVS +DL+ L+ NLD    E  KW++V +++N
Sbjct: 69   RHSVSFSSPAASATD---IASSNSRVSEIVSVADLKFLIENLDEKLIENEKWENVTNKRN 125

Query: 457  NMLSYTAKCCKPKDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDD 636
            N+L+YTAKC KPKD P+KY+S+T+FENC++E LRDFYMDNEYR QWDKT+V+H QLQVD 
Sbjct: 126  NLLAYTAKCFKPKDAPIKYLSLTVFENCTMEVLRDFYMDNEYRKQWDKTVVEHEQLQVDR 185

Query: 637  TNGIEIGRTVKKFPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFR 816
            TNG EIG T+KKFPLLTPREYVLAWRLWEGK+KT+YCF +ECE+ +A RQ+++VRV ++R
Sbjct: 186  TNGTEIGCTIKKFPLLTPREYVLAWRLWEGKDKTFYCFIKECEYPLAVRQRRFVRVKFYR 245

Query: 817  SGWRIRKVPGRNACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQ 996
            SGWRI KVPGRNAC+I M HQEDAGLN+EMAKL FS+GIWSYVCKM+ ALRKY+ + +P 
Sbjct: 246  SGWRISKVPGRNACQITMFHQEDAGLNLEMAKLAFSRGIWSYVCKMNDALRKYSLMSHPW 305

Query: 997  SSSIITAVTCMQKVPSELDTTTITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKMVAN 1176
            +   +TAVT +QKVP EL+T        +  +  +   +   E + K  +RRPSKK+VAN
Sbjct: 306  TGPAVTAVTLIQKVPPELETLNTVVDTQATSTLIAAQGLDTGEAKEKKFLRRPSKKIVAN 365

Query: 1177 GLLLLGGVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQ 1296
            GLLLLGGVI LSRGHSSLGAKVAMA IL KL +H A SGQ
Sbjct: 366  GLLLLGGVIFLSRGHSSLGAKVAMAYILTKLRKHDASSGQ 405


>ref|XP_004156905.1| PREDICTED: uncharacterized protein LOC101230247 [Cucumis sativus]
          Length = 399

 Score =  428 bits (1101), Expect = e-117
 Identities = 219/390 (56%), Positives = 275/390 (70%), Gaps = 22/390 (5%)
 Frame = +1

Query: 193  SDVVWRENVNGKWATVIVLLFLFIWHTLKRSNSFSSKRLGSTTSQIIPTTET-------- 348
            S+ +WR  + G W TV VLLFL I H      + SS      TS ++    T        
Sbjct: 9    SEDLWRGTIYGSWGTVFVLLFLAICHLFCSKKNVSSLLSRFQTSSLLADRHTSSLLADRH 68

Query: 349  ------------RIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKP 492
                        RI + +SD+DL+ L++NLDG   E  KW+ VV++ N+ LSY+AKCCKP
Sbjct: 69   TSSPSCECPSPSRIMEAISDTDLKSLLDNLDGRINENEKWERVVEKSNDYLSYSAKCCKP 128

Query: 493  KDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKK 672
            KDGPLKY SVTIFENC  + LRDFYMDN+YR QWD T++ H QLQ+D T+GIE+GRT+KK
Sbjct: 129  KDGPLKYSSVTIFENCCPKLLRDFYMDNDYRKQWDSTVLMHEQLQMDGTSGIEVGRTLKK 188

Query: 673  FPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRKVPGRN 852
            FPLLTPREY+L+WRLWEGK++T+YCFT+ECEH  AP+QKKYVRV +FRSGWRIR+V GRN
Sbjct: 189  FPLLTPREYILSWRLWEGKDETFYCFTKECEHPSAPQQKKYVRVTFFRSGWRIRRVSGRN 248

Query: 853  ACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQ 1032
            ACEI M+HQEDAGLNVEMAKL+F+KGIWS+VCKMD ALRKY+ + N  SSS+++AVT ++
Sbjct: 249  ACEITMLHQEDAGLNVEMAKLVFAKGIWSFVCKMDKALRKYSLINNYPSSSLVSAVTLIK 308

Query: 1033 KVPSEL-DTTTITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKMVANGLLLLGGVICL 1209
            KVP    D   I + +    + + G    E     +  + R SKK++ NGLLL+GGVICL
Sbjct: 309  KVPDGFEDMDGIISEENMVETESCGQVSSE-----ERKLSRASKKLLTNGLLLIGGVICL 363

Query: 1210 SRGHSSLGAKVAMACILKKLTEHT-AVSGQ 1296
            SRGHSSLGAKV MA IL KL++   A  GQ
Sbjct: 364  SRGHSSLGAKVVMAYILTKLSKRVDAPQGQ 393


>ref|XP_004145626.1| PREDICTED: uncharacterized protein LOC101203824 [Cucumis sativus]
          Length = 399

 Score =  428 bits (1101), Expect = e-117
 Identities = 219/390 (56%), Positives = 275/390 (70%), Gaps = 22/390 (5%)
 Frame = +1

Query: 193  SDVVWRENVNGKWATVIVLLFLFIWHTLKRSNSFSSKRLGSTTSQIIPTTET-------- 348
            S+ +WR  + G W TV VLLFL I H      + SS      TS ++    T        
Sbjct: 9    SEDLWRGTIYGSWGTVFVLLFLAICHLFCSKKNVSSLLSRFPTSSLLADRHTSSLLADRH 68

Query: 349  ------------RIADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKP 492
                        RI + +SD+DL+ L++NLDG   E  KW+ VV++ N+ LSY+AKCCKP
Sbjct: 69   TSSPSCECPSPSRIMEAISDTDLKSLLDNLDGRINENEKWERVVEKSNDYLSYSAKCCKP 128

Query: 493  KDGPLKYMSVTIFENCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKK 672
            KDGPLKY SVTIFENC  + LRDFYMDN+YR QWD T++ H QLQ+D T+GIE+GRT+KK
Sbjct: 129  KDGPLKYSSVTIFENCCPKLLRDFYMDNDYRKQWDSTVLMHEQLQMDGTSGIEVGRTLKK 188

Query: 673  FPLLTPREYVLAWRLWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRKVPGRN 852
            FPLLTPREY+L+WRLWEGK++T+YCFT+ECEH  AP+QKKYVRV +FRSGWRIR+V GRN
Sbjct: 189  FPLLTPREYILSWRLWEGKDETFYCFTKECEHPSAPQQKKYVRVTFFRSGWRIRRVSGRN 248

Query: 853  ACEIKMVHQEDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQ 1032
            ACEI M+HQEDAGLNVEMAKL+F+KGIWS+VCKMD ALRKY+ + N  SSS+++AVT ++
Sbjct: 249  ACEITMLHQEDAGLNVEMAKLVFAKGIWSFVCKMDKALRKYSLINNYPSSSLVSAVTLIK 308

Query: 1033 KVPSEL-DTTTITNCQPSERSSTSGFAIQETEVRGKTLMRRPSKKMVANGLLLLGGVICL 1209
            KVP    D   I + +    + + G    E     +  + R SKK++ NGLLL+GGVICL
Sbjct: 309  KVPDGFEDMDGIISEENMVETESCGQVSSE-----ERKLSRASKKLLTNGLLLIGGVICL 363

Query: 1210 SRGHSSLGAKVAMACILKKLTEHT-AVSGQ 1296
            SRGHSSLGAKV MA IL KL++   A  GQ
Sbjct: 364  SRGHSSLGAKVVMAYILTKLSKRVDAPQGQ 393


>ref|XP_002269717.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like [Vitis vinifera]
          Length = 1068

 Score =  425 bits (1093), Expect = e-116
 Identities = 221/398 (55%), Positives = 276/398 (69%), Gaps = 27/398 (6%)
 Frame = +1

Query: 193  SDVVWRENVNGKWATVIVLLFLFIWH------TLKRSNSFSSKRLGSTTSQIIPTTETRI 354
            S   W  +  G WAT++ +L + +WH      + +  +S +S     + S + P  + RI
Sbjct: 12   SSSTWEIHGAGGWATMVAVLVIILWHLGRLIFSARFRSSSNSTPTSLSASAVNP--QFRI 69

Query: 355  ADIVSDSDLRCLVNNLDGIYEEEVKWDDVVDRKNNMLSYTAKCCKPKDGPLKYMSVTIFE 534
            ++IV D+DL+ L++NLD       +WD+VVD++NN +SY AKCCKPKDGPLKY+SVT+FE
Sbjct: 70   SEIVGDADLKTLIDNLDEKLNLNERWDNVVDKRNNFVSYNAKCCKPKDGPLKYVSVTVFE 129

Query: 535  NCSVERLRDFYMDNEYRVQWDKTMVDHVQLQVDDTNGIEIGRTVKKFPLLTPREYVLAWR 714
            NCS E LRDFYMD++YR QWDK +++H QLQVD++NG EIGRT+KK PLLTPREYVLAWR
Sbjct: 130  NCSTEMLRDFYMDSDYRKQWDKMVLEHEQLQVDESNGTEIGRTIKKLPLLTPREYVLAWR 189

Query: 715  LWEGKEKTYYCFTRECEHSMAPRQKKYVRVGYFRSGWRIRK-----VPGRNACEIKMVHQ 879
            LWEGK+KT+YCF +ECEH +A RQK+YVRV +FRSGWRIRK         NACEIKMVHQ
Sbjct: 190  LWEGKDKTFYCFIKECEHPLASRQKRYVRVSFFRSGWRIRKGECLVYLHLNACEIKMVHQ 249

Query: 880  EDAGLNVEMAKLLFSKGIWSYVCKMDAALRKYTRVCNPQSSSIITAVTCMQKV---PSEL 1050
            EDAGLNVEMAKL F+KGIWSYVCKMD ALRKY+ + N Q  S ++A+T +QKV    S+L
Sbjct: 250  EDAGLNVEMAKLAFAKGIWSYVCKMDNALRKYSAIHNSQQGSAVSAITLIQKVRHCSSQL 309

Query: 1051 DTTTITNCQPS-----------ERSSTSGFAIQETEVRG--KTLMRRPSKKMVANGLLLL 1191
                   C PS            R S+S         +G  +   RRPSKK+VANGLLLL
Sbjct: 310  ALCINARCFPSIQVPPGLETINSRESSSHLETSAASGQGNKRKFSRRPSKKLVANGLLLL 369

Query: 1192 GGVICLSRGHSSLGAKVAMACILKKLTEHTAVSGQAGR 1305
             GV CLSRGH  LGA VAMA ILKKLT+  A   Q+G+
Sbjct: 370  -GVFCLSRGHPPLGANVAMAYILKKLTKRGATPSQSGQ 406


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