BLASTX nr result

ID: Coptis24_contig00003059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003059
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543791.1| PREDICTED: uncharacterized protein LOC100815...   147   8e-34
ref|XP_003614772.1| hypothetical protein MTR_5g059050 [Medicago ...   147   8e-34
ref|NP_001237897.1| uncharacterized protein LOC100527306 [Glycin...   146   2e-33
gb|AFK39379.1| unknown [Lotus japonicus] gi|388512619|gb|AFK4437...   140   1e-31
ref|XP_002300999.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_003543791.1| PREDICTED: uncharacterized protein LOC100815781 [Glycine max]
          Length = 105

 Score =  147 bits (372), Expect = 8e-34
 Identities = 72/94 (76%), Positives = 82/94 (87%)
 Frame = +3

Query: 87  EMGGGETPKDLAECSVSNSLGTWVFSVAGALIAIPIGIKRKSLGPLVFFGTTGTMLDIIM 266
           +MGG E  K L +CSVSN+LGTWVFSVAGAL+AIP+GIKRKSL PLVFFGTTGTMLDIIM
Sbjct: 11  KMGGEENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIM 70

Query: 267 GVTACEREHAERQMKLMEAQNLSTDTVLVETGSD 368
           G++ACEREHAERQMKL+EAQN + +T L ET  D
Sbjct: 71  GISACEREHAERQMKLLEAQNAAAETPLGETEID 104


>ref|XP_003614772.1| hypothetical protein MTR_5g059050 [Medicago truncatula]
           gi|355516107|gb|AES97730.1| hypothetical protein
           MTR_5g059050 [Medicago truncatula]
          Length = 93

 Score =  147 bits (372), Expect = 8e-34
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = +3

Query: 90  MGGGETPKDLAECSVSNSLGTWVFSVAGALIAIPIGIKRKSLGPLVFFGTTGTMLDIIMG 269
           MGGGE  K L +CSVSN+LGTWVFSVAGAL+AIP+GIKRKSL PLVFFGTTGTMLDIIMG
Sbjct: 1   MGGGEE-KHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 59

Query: 270 VTACEREHAERQMKLMEAQNLSTDTVLVETGSD 368
           +TACEREHAERQM+L+EAQN + +T L ET +D
Sbjct: 60  ITACEREHAERQMQLLEAQNAAAETSLEETHTD 92


>ref|NP_001237897.1| uncharacterized protein LOC100527306 [Glycine max]
           gi|255632053|gb|ACU16379.1| unknown [Glycine max]
          Length = 94

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = +3

Query: 90  MGGGETPKDLAECSVSNSLGTWVFSVAGALIAIPIGIKRKSLGPLVFFGTTGTMLDIIMG 269
           MGG E  K L +CSVSN+LGTWVFSVAGAL+AIP+GIKR+SL PLVFFGTTGTMLDIIMG
Sbjct: 1   MGGEENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRRSLAPLVFFGTTGTMLDIIMG 60

Query: 270 VTACEREHAERQMKLMEAQNLSTDTVLVETGSD 368
           ++ACEREHAERQMKL+EAQN + +T L ET  D
Sbjct: 61  ISACEREHAERQMKLLEAQNAAAETSLGETEID 93


>gb|AFK39379.1| unknown [Lotus japonicus] gi|388512619|gb|AFK44371.1| unknown
           [Lotus japonicus]
          Length = 93

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/90 (77%), Positives = 79/90 (87%)
 Frame = +3

Query: 90  MGGGETPKDLAECSVSNSLGTWVFSVAGALIAIPIGIKRKSLGPLVFFGTTGTMLDIIMG 269
           MGG E  K L +CSVSN+LGTWVFSVAGAL+AIP+GIKRKSL PLVFFGTTGTMLDIIMG
Sbjct: 1   MGGEE--KHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 58

Query: 270 VTACEREHAERQMKLMEAQNLSTDTVLVET 359
           ++ CEREHAERQM L+EAQN +T+T L ET
Sbjct: 59  ISQCEREHAERQMALLEAQNSATETSLAET 88


>ref|XP_002300999.1| predicted protein [Populus trichocarpa] gi|222842725|gb|EEE80272.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = +3

Query: 96  GGETPKDLAECSVSNSLGTWVFSVAGALIAIPIGIKRKSLGPLVFFGTTGTMLDIIMGVT 275
           G E  K L ECSV+N+LGTWVFSVAGAL+AIP+GIKRKS GPLVFFGTTGTMLDIIMG+T
Sbjct: 4   GQENVKHLEECSVANALGTWVFSVAGALLAIPVGIKRKSFGPLVFFGTTGTMLDIIMGIT 63

Query: 276 ACEREHAERQMKLMEAQNLSTDTVLVETGSD 368
            CEREHAERQ KL+EAQN + D     TGS+
Sbjct: 64  QCEREHAERQAKLLEAQNSAGDASFTVTGSE 94


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