BLASTX nr result
ID: Coptis24_contig00003058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003058
(1780 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003536287.1| PREDICTED: malate dehydrogenase [NADP], chlo... 686 0.0
ref|NP_001234056.1| malate dehydrogenase [Solanum lycopersicum] ... 686 0.0
ref|NP_001062517.1| Os08g0562100 [Oryza sativa Japonica Group] g... 682 0.0
gb|EEC84038.1| hypothetical protein OsI_30287 [Oryza sativa Indi... 682 0.0
ref|XP_002265080.1| PREDICTED: malate dehydrogenase [NADP], chlo... 680 0.0
>ref|XP_003536287.1| PREDICTED: malate dehydrogenase [NADP], chloroplastic-like [Glycine
max]
Length = 436
Score = 686 bits (1771), Expect = 0.0
Identities = 343/435 (78%), Positives = 368/435 (84%), Gaps = 2/435 (0%)
Frame = +3
Query: 105 MAVTDFTPTYKQPHFLPSQXXXXXXXXXXXXXXXXXPFPRRNNARVCCXXXXXXXXXXXX 284
MAVT F PT + H SQ P R AR+CC
Sbjct: 1 MAVTQFNPTCSKTHLHSSQLPFLSRTLPRHRHCTIAPLHRTQQARICCSVAPNEVQVPAV 60
Query: 285 XXXGKKG--ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFG 458
K ECYGVFCLTYDL+A EET+SWK LINIAVSGAAGMI+NHLLFKLASGEVFG
Sbjct: 61 KTSDPKSKPECYGVFCLTYDLRAEEETRSWKKLINIAVSGAAGMIANHLLFKLASGEVFG 120
Query: 459 PDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKP 638
PDQPIALKLLGSERS QALEGVAMELEDSL+PLLREVSIGIDPY++FQDAEWALLIGAKP
Sbjct: 121 PDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVSIGIDPYEVFQDAEWALLIGAKP 180
Query: 639 RGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKN 818
RGPGMERA LLDINGQI+A QG+ALNAVASRNVKVIVVGNPCNTNALIC+KNAPNIPAKN
Sbjct: 181 RGPGMERADLLDINGQIYAAQGRALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKN 240
Query: 819 FHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKD 998
FHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNARI GLPVK+V+KD
Sbjct: 241 FHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNARIDGLPVKEVVKD 300
Query: 999 SKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNG 1178
KWLE++FTE VQKRGG LI+KWGRSS AST+VSIVDAIRSLVTPT EGDWFS+GVY++G
Sbjct: 301 QKWLEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLVTPTPEGDWFSSGVYSDG 360
Query: 1179 NPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEG 1358
NPYGIAE IVFSMPCRSKGDGDYELVKDV+ DD+L +RI K+EAELLAEKRCVAHLTGEG
Sbjct: 361 NPYGIAEGIVFSMPCRSKGDGDYELVKDVIFDDYLQQRIAKTEAELLAEKRCVAHLTGEG 420
Query: 1359 NAYCDLPGDTMLPGE 1403
A CDLPGDTMLPGE
Sbjct: 421 IAVCDLPGDTMLPGE 435
>ref|NP_001234056.1| malate dehydrogenase [Solanum lycopersicum]
gi|56562183|emb|CAH60894.1| malate dehydrogenase [Solanum
lycopersicum]
Length = 442
Score = 686 bits (1770), Expect = 0.0
Identities = 347/441 (78%), Positives = 374/441 (84%), Gaps = 8/441 (1%)
Frame = +3
Query: 105 MAVTDFTPTY----KQPHFLPSQXXXXXXXXXXXXXXXXXPFPR-RNNARVCCXXXXXXX 269
MAV +F P+ K+ F SQ P R N++++CC
Sbjct: 1 MAVAEFIPSSSSLTKKASFYSSQLSNVSTKISHQRRLSFKPLLRTHNHSQICCSVTSKEA 60
Query: 270 XXXXXXXXG---KKGECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLA 440
KK ECYGVFCLTYDLKA EET SWK +I ++VSGAAGMI+NHLLFKLA
Sbjct: 61 QATTVVQTDDPKKKSECYGVFCLTYDLKAEEETSSWKKMITVSVSGAAGMIANHLLFKLA 120
Query: 441 SGEVFGPDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWAL 620
SGEVFGPDQPIAL+LLGSERS QALEGVAMELEDSLYPLLREV+IGIDPY++FQDAEWAL
Sbjct: 121 SGEVFGPDQPIALRLLGSERSIQALEGVAMELEDSLYPLLREVNIGIDPYEVFQDAEWAL 180
Query: 621 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAP 800
LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALIC+KNAP
Sbjct: 181 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAP 240
Query: 801 NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPV 980
NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNA+I GLPV
Sbjct: 241 NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPV 300
Query: 981 KDVIKDSKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFST 1160
K+VIKD+KWLE++FTE VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLVTPT EGDWFST
Sbjct: 301 KEVIKDTKWLEEEFTEKVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFST 360
Query: 1161 GVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVA 1340
GVYTNGNPYGIA+DIVFSMPCRSKGDGDYELVK+V+ DD+L RIKKSE ELLAEKRCVA
Sbjct: 361 GVYTNGNPYGIAQDIVFSMPCRSKGDGDYELVKEVIFDDYLWNRIKKSEDELLAEKRCVA 420
Query: 1341 HLTGEGNAYCDLPGDTMLPGE 1403
HLTGEG A CDLPGDTMLPGE
Sbjct: 421 HLTGEGIAVCDLPGDTMLPGE 441
>ref|NP_001062517.1| Os08g0562100 [Oryza sativa Japonica Group]
gi|42408428|dbj|BAD09610.1| putative malate dehydrogenase
[NADP], chloroplast precursor (NADP-MDH) [Oryza sativa
Japonica Group] gi|45736179|dbj|BAD13225.1| putative
malate dehydrogenase [NADP], chloroplast precursor
(NADP-MDH) [Oryza sativa Japonica Group]
gi|113624486|dbj|BAF24431.1| Os08g0562100 [Oryza sativa
Japonica Group] gi|215740957|dbj|BAG97452.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222641023|gb|EEE69155.1| hypothetical protein
OsJ_28293 [Oryza sativa Japonica Group]
Length = 433
Score = 682 bits (1760), Expect = 0.0
Identities = 334/366 (91%), Positives = 351/366 (95%)
Frame = +3
Query: 306 ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 485
ECYGVFC TYDL+A E+TKSWKSL+N+AVSGAAGMISNHLLFKLASGEVFGPDQPIALKL
Sbjct: 67 ECYGVFCTTYDLRADEKTKSWKSLVNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 126
Query: 486 LGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKPRGPGMERAG 665
LGSERS QALEGVAMELEDSLYPLLREVSIGIDPY +F+DAEWALLIGAKPRGPGMER+
Sbjct: 127 LGSERSIQALEGVAMELEDSLYPLLREVSIGIDPYVVFEDAEWALLIGAKPRGPGMERSA 186
Query: 666 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKNFHALTRLDE 845
LLDINGQIFAEQGKALN+VASRNVKVIVVGNPCNTNALIC+KNAPNIPAKNFHALTRLDE
Sbjct: 187 LLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDE 246
Query: 846 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKDSKWLEKDFT 1025
NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+I G PVK+VIKD+KWLE +FT
Sbjct: 247 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGRPVKEVIKDTKWLEDEFT 306
Query: 1026 EDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNGNPYGIAEDI 1205
+ VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLV PT EGDWFSTGVYT GNPYGIAEDI
Sbjct: 307 KTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDI 366
Query: 1206 VFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEGNAYCDLPGD 1385
VFSMPCRSKGDGDYELVKDV +DDFL ERIKKSEAELLAEKRCVAHLTGEGNA+CDLPGD
Sbjct: 367 VFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGD 426
Query: 1386 TMLPGE 1403
TMLPGE
Sbjct: 427 TMLPGE 432
>gb|EEC84038.1| hypothetical protein OsI_30287 [Oryza sativa Indica Group]
Length = 433
Score = 682 bits (1760), Expect = 0.0
Identities = 334/366 (91%), Positives = 351/366 (95%)
Frame = +3
Query: 306 ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 485
ECYGVFC TYDL+A E+TKSWKSL+N+AVSGAAGMISNHLLFKLASGEVFGPDQPIALKL
Sbjct: 67 ECYGVFCTTYDLRADEKTKSWKSLVNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 126
Query: 486 LGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKPRGPGMERAG 665
LGSERS QALEGVAMELEDSLYPLLREVSIGIDPY +F+DAEWALLIGAKPRGPGMER+
Sbjct: 127 LGSERSIQALEGVAMELEDSLYPLLREVSIGIDPYVVFEDAEWALLIGAKPRGPGMERSA 186
Query: 666 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKNFHALTRLDE 845
LLDINGQIFAEQGKALN+VASRNVKVIVVGNPCNTNALIC+KNAPNIPAKNFHALTRLDE
Sbjct: 187 LLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDE 246
Query: 846 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKDSKWLEKDFT 1025
NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+I G PVK+VIKD+KWLE +FT
Sbjct: 247 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGRPVKEVIKDTKWLEDEFT 306
Query: 1026 EDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNGNPYGIAEDI 1205
+ VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLV PT EGDWFSTGVYT GNPYGIAEDI
Sbjct: 307 KTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDI 366
Query: 1206 VFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEGNAYCDLPGD 1385
VFSMPCRSKGDGDYELVKDV +DDFL ERIKKSEAELLAEKRCVAHLTGEGNA+CDLPGD
Sbjct: 367 VFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGD 426
Query: 1386 TMLPGE 1403
TMLPGE
Sbjct: 427 TMLPGE 432
>ref|XP_002265080.1| PREDICTED: malate dehydrogenase [NADP], chloroplastic [Vitis
vinifera] gi|296085946|emb|CBI31387.3| unnamed protein
product [Vitis vinifera]
Length = 437
Score = 680 bits (1755), Expect = 0.0
Identities = 344/436 (78%), Positives = 369/436 (84%), Gaps = 3/436 (0%)
Frame = +3
Query: 105 MAVTDFTPTYK--QPHFLPSQXXXXXXXXXXXXXXXXXPFPRRNNARVCCXXXXXXXXXX 278
MA+ +P+Y Q H SQ P PR NAR+ C
Sbjct: 1 MALAYLSPSYANTQLHLHSSQLSFLSTHLSFHRRHSLRPLPRTRNARISCSVASNEAPVA 60
Query: 279 XXXXXGK-KGECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVF 455
K K EC+GVFC TYDLKA EETKSWK LINIAVSGAAGMISNHLLFKLA+GEVF
Sbjct: 61 VQAQDQKIKPECFGVFCTTYDLKAEEETKSWKKLINIAVSGAAGMISNHLLFKLAAGEVF 120
Query: 456 GPDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAK 635
GPDQPIA KLLGSERSFQALEGVAMELEDSL+PLLREVSIGIDPY++FQD EWALLIGAK
Sbjct: 121 GPDQPIAFKLLGSERSFQALEGVAMELEDSLFPLLREVSIGIDPYEVFQDVEWALLIGAK 180
Query: 636 PRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAK 815
PRGPGMERA LLDINGQIFAEQGKALNAVASRNVKV+VVGNPCNTNALICMKNAPNIPAK
Sbjct: 181 PRGPGMERADLLDINGQIFAEQGKALNAVASRNVKVMVVGNPCNTNALICMKNAPNIPAK 240
Query: 816 NFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIK 995
NFHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNARI GLPVK+VIK
Sbjct: 241 NFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNARINGLPVKEVIK 300
Query: 996 DSKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTN 1175
D KWLE++FTE VQKRGGVLI+KWGRSS ASTAVSIVDA++SLVTPT EGDWFS+GVYT
Sbjct: 301 DIKWLEEEFTEKVQKRGGVLIQKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTT 360
Query: 1176 GNPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGE 1355
GNPYG+AE IVFSMPCRSKGDGDYELVKDV+ D++L +RI K+EAELLAEKRCVAHLTGE
Sbjct: 361 GNPYGVAEGIVFSMPCRSKGDGDYELVKDVIFDEYLLKRITKTEAELLAEKRCVAHLTGE 420
Query: 1356 GNAYCDLPGDTMLPGE 1403
G A+CDLP DTMLPGE
Sbjct: 421 GIAFCDLPEDTMLPGE 436