BLASTX nr result
ID: Coptis24_contig00003057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003057
(439 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat... 216 1e-54
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat... 199 3e-49
ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago ... 197 6e-49
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat... 196 1e-48
gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays] 186 2e-45
>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 216 bits (551), Expect = 1e-54
Identities = 95/146 (65%), Positives = 125/146 (85%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
RD+V+WS+MIA YGIHG G EA+ +F+++ ++S V+PNN+TFLS+LSACSH GLV+EG++
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
IF+RMV D+ + P EH+ IMVDLLGR G+L +AM +I++M +P+GPHVWGALLGACRIH
Sbjct: 532 IFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIH 591
Query: 78 NNIKMGEIAAKNLLRLDPEHAGYYLL 1
+NI+MGE AAKNL LDP HAGYY+L
Sbjct: 592 HNIEMGEAAAKNLFWLDPSHAGYYIL 617
Score = 159 bits (401), Expect = 3e-37
Identities = 76/146 (52%), Positives = 106/146 (72%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
+D+V WSAMIA YGIHG G++AI +F+++ ++ V+P+++TF VLSACSH+GL++EG
Sbjct: 983 KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAG-VRPSHVTFTCVLSACSHSGLLEEGKM 1041
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
F M +F I L +Y+ MVDLLGR G+L EA+ LI+ M V +WG+LLGACRIH
Sbjct: 1042 YFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIH 1101
Query: 78 NNIKMGEIAAKNLLRLDPEHAGYYLL 1
NN+ + E A +L LDP HAGY++L
Sbjct: 1102 NNLDLAEKIADHLFHLDPVHAGYHVL 1127
Score = 65.9 bits (159), Expect = 3e-09
Identities = 42/122 (34%), Positives = 66/122 (54%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
RD+V W++MI+GY +G E +G F+ L SS V PN ++ LSVL AC + G + +G E
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFD-LMRSSGVIPNRVSILSVLLACGNLGALRKG-E 939
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
F+ V E + + ++D+ + G LD A L D+ A W A++ + IH
Sbjct: 940 WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETA-GKDLVCWSAMIASYGIH 998
Query: 78 NN 73
+
Sbjct: 999 GH 1000
>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 199 bits (505), Expect = 3e-49
Identities = 87/146 (59%), Positives = 119/146 (81%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
+D+V WS++IA YG HG G+EA+ +F +++ S VKPN++TF+S+LSACSH GL++EGI+
Sbjct: 473 KDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIK 532
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
+F+ MV ++ + P EHY IMVDLLGR G+LD+A+ +I++M + +GPHVWGALLGACRIH
Sbjct: 533 MFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIH 592
Query: 78 NNIKMGEIAAKNLLRLDPEHAGYYLL 1
NIK+GE+AA NL LDP HAGYY L
Sbjct: 593 QNIKIGELAALNLFLLDPNHAGYYTL 618
>ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein
MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 197 bits (502), Expect = 6e-49
Identities = 87/146 (59%), Positives = 116/146 (79%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
+D+V WS++IA YG HG G+EA+ +F ++ S KPNN+TF+S+LSACSH+GL+ EGI
Sbjct: 610 KDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGIN 669
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
+F+ MV + ++P EHY+IMVDLLGR G+LD A+ +I+ M + +GP +WGALLGACRIH
Sbjct: 670 MFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIH 729
Query: 78 NNIKMGEIAAKNLLRLDPEHAGYYLL 1
NIKMGE+AAKNL LDP HAGYY+L
Sbjct: 730 QNIKMGEVAAKNLFSLDPNHAGYYIL 755
>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 196 bits (499), Expect = 1e-48
Identities = 86/145 (59%), Positives = 118/145 (81%)
Frame = -2
Query: 435 DIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIEI 256
D+V WS++IA YG HG G+EA+ + ++++ S VKPN++TF+S+LSACSH GL++EGI++
Sbjct: 473 DVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKM 532
Query: 255 FNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIHN 76
F+ MV ++ + P +EHY IMVDLLGR G+LD+A+ +I+ M + +GPHVWGALLGACRIH
Sbjct: 533 FHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQ 592
Query: 75 NIKMGEIAAKNLLRLDPEHAGYYLL 1
NIK+GE+AA NL LDP HAGYY L
Sbjct: 593 NIKIGELAALNLFLLDPNHAGYYTL 617
>gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 186 bits (472), Expect = 2e-45
Identities = 90/146 (61%), Positives = 111/146 (76%)
Frame = -2
Query: 438 RDIVVWSAMIAGYGIHGLGQEAIGVFNRLTESSAVKPNNITFLSVLSACSHTGLVDEGIE 259
+DIVVW +MIAGYG HGLGQEA+ ++ R+ SS ++PNN+TFLSVLSACSH+GLV EGI+
Sbjct: 935 KDIVVWGSMIAGYGAHGLGQEAVALYQRMIASS-IQPNNVTFLSVLSACSHSGLVQEGIQ 993
Query: 258 IFNRMVRDFHIEPTLEHYSIMVDLLGRTGKLDEAMHLIDQMAVPSGPHVWGALLGACRIH 79
IF+ M + F + P EH S MVDLLGR G+L EA+ +I M + H W ALL ACR H
Sbjct: 994 IFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKH 1053
Query: 78 NNIKMGEIAAKNLLRLDPEHAGYYLL 1
NN KM E+AAKNLL+LDP+H GYY L
Sbjct: 1054 NNTKMSEVAAKNLLKLDPDHVGYYNL 1079