BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003056
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   374   e-101
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   357   3e-96
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...   349   7e-94
ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   347   3e-93
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              345   1e-92

>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g37570 [Vitis vinifera]
          Length = 561

 Score =  374 bits (959), Expect = e-101
 Identities = 182/414 (43%), Positives = 270/414 (65%)
 Frame = -1

Query: 1250 VRVQTKLIDFYGKCGLMEEAERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKRIPD 1071
            V V T LID YGKCG +  A +VFD + ER+V +W  +I+G+    ++  A+  F  +P+
Sbjct: 158  VFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPE 217

Query: 1070 RNDFTWEAMISGYANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAAR 891
            +N  +W A+ISGY   G +  A+K+F            N V  T MI GYAK GD+ +AR
Sbjct: 218  KNAVSWNAIISGYVKCGDLRSARKMFDEMPHR------NVVSFTTMIDGYAKSGDMASAR 271

Query: 890  RVFDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTH 711
             VF+     DVV+W+A+IS Y Q G   EAV +F  M       KP+E  + S++SAC+ 
Sbjct: 272  FVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCS--RNVKPDEFIMVSLMSACSQ 329

Query: 710  LGSVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYST 531
            +GS+ELA+W+ +Y+     ++   H + ALIDM+AKCG  D A +LF++   +D++ Y +
Sbjct: 330  MGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCS 389

Query: 530  MIAGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEY 351
            M+ G  +HG G +A+ +FS++  +G+ PD++ F ++L+ACS AGLV+EGC YF+ M+ +Y
Sbjct: 390  MMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDY 449

Query: 350  SILPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEIGE 171
            SI+P+ DHY CMVDLLGRAGR+ +AY  +  +  PVEP+AG WGALL AC+++ ++E+GE
Sbjct: 450  SIVPSPDHYACMVDLLGRAGRLKEAYELLKSM--PVEPHAGAWGALLGACKLHCDIELGE 507

Query: 170  IASKHLLEIEPENAGNYVLLASSYAKARKWKQVECVRGLMKSRGTTKSSGFSQI 9
            + +  L E+EP+NAGNYVLL++ YA A +W  V  +R  M+ RG  K  G S I
Sbjct: 508  VVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  357 bits (917), Expect = 3e-96
 Identities = 174/414 (42%), Positives = 261/414 (63%)
 Frame = -1

Query: 1250 VRVQTKLIDFYGKCGLMEEAERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKRIPD 1071
            V V T LID YGKCG +  A +VFD + ER+V +W  +I+G+    ++  A+  F  +P+
Sbjct: 158  VFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPE 217

Query: 1070 RNDFTWEAMISGYANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAAR 891
            +N  +W A+ISGY   G +  A+K+F            N V  T MI GYAK GD+ +AR
Sbjct: 218  KNAVSWNAIISGYVKCGDLRSARKMF------DEMPHRNVVSFTTMIDGYAKSGDMASAR 271

Query: 890  RVFDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTH 711
             VF+     DVV+W+A+I   C                      KP+E  + S++SAC+ 
Sbjct: 272  FVFEEAPERDVVAWSALIFRVCAE-----------------WNVKPDEFIMVSLMSACSQ 314

Query: 710  LGSVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYST 531
            +GS+ELA+W+ +Y+     ++   H + ALIDM+AKCG  D A +LF++   +D++ Y +
Sbjct: 315  MGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCS 374

Query: 530  MIAGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEY 351
            M+ G  +HG G +A+ +FS++  +G+ PD++ F ++L+ACS AGLV+EGC YF+ M+ +Y
Sbjct: 375  MMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDY 434

Query: 350  SILPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEIGE 171
            SI+P+ DHY CMVDLLGRAGR+ +AY  +  +  PVEP+AG WGALL AC+++ ++E+GE
Sbjct: 435  SIVPSPDHYACMVDLLGRAGRLKEAYELLKSM--PVEPHAGAWGALLGACKLHCDIELGE 492

Query: 170  IASKHLLEIEPENAGNYVLLASSYAKARKWKQVECVRGLMKSRGTTKSSGFSQI 9
            + +  L E+EP+NAGNYVLL++ YA A +W  V  +R  M+ RG  K  G S I
Sbjct: 493  VVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
            predicted protein [Populus trichocarpa]
          Length = 547

 Score =  349 bits (896), Expect = 7e-94
 Identities = 175/414 (42%), Positives = 264/414 (63%)
 Frame = -1

Query: 1250 VRVQTKLIDFYGKCGLMEEAERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKRIPD 1071
            V V + LI FYGKC  +  A +VFD I ER+V +W  +++G+   G++E AK  F+R+P+
Sbjct: 140  VYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPE 199

Query: 1070 RNDFTWEAMISGYANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAAR 891
            RN  +W AMISG    G +  A+K+F            N V  T MI GYAK GD+ +AR
Sbjct: 200  RNLPSWNAMISGLGKAGDLSGARKVFDEMVER------NVVSFTVMIDGYAKVGDMASAR 253

Query: 890  RVFDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTH 711
             +FD     DVV+W+A+IS Y +     EAV +F  M+ +    KP+E  + S++SAC+ 
Sbjct: 254  ALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMN--VKPDEFIMVSLMSACSQ 311

Query: 710  LGSVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYST 531
            LG+ +LA+W+  Y+     +    H + ALIDMHAKCG  ++A +LF+    +D++   +
Sbjct: 312  LGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCS 371

Query: 530  MIAGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEY 351
            +I G  +HGRGVEA+E+F+++ ++G+ PD + F ++L+ACS  GL+ +G  +FD M+ +Y
Sbjct: 372  LIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKY 431

Query: 350  SILPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEIGE 171
            S++P+ +HY CMVDLL RAG++  AY  +  +  P++P+A  WGALL AC+++ +VE+ E
Sbjct: 432  SVVPSPNHYACMVDLLSRAGQLRAAYDLLKSM--PLKPHACAWGALLGACKLHGDVELRE 489

Query: 170  IASKHLLEIEPENAGNYVLLASSYAKARKWKQVECVRGLMKSRGTTKSSGFSQI 9
              +  LLE+EPE AG+YVLL++ YA A +W  V  VR  MK RG  K  G S I
Sbjct: 490  EVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543


>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g37570-like [Glycine max]
          Length = 566

 Score =  347 bits (891), Expect = 3e-93
 Identities = 178/412 (43%), Positives = 256/412 (62%)
 Frame = -1

Query: 1244 VQTKLIDFYGKCGLMEEAERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKRIPDRN 1065
            V T LID YGKCG + +A +VFD +S+R+V +W  ++ G+V  G++  A+  F  +P RN
Sbjct: 165  VGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRN 224

Query: 1064 DFTWEAMISGYANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAARRV 885
              +W +M+ G+  +G +  A+ +F            N V  T MI GYAK GD+ AAR +
Sbjct: 225  VASWNSMLQGFVKMGDLSGARGVFDAMPEK------NVVSFTTMIDGYAKAGDMAAARFL 278

Query: 884  FDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTHLG 705
            FD     DVV+W+A+IS Y Q GL  +A+ +F  M  +    KP+E  + S++SA   LG
Sbjct: 279  FDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMN--VKPDEFILVSLMSASAQLG 336

Query: 704  SVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYSTMI 525
             +ELA+W+  Y+     +L   H + AL+DM+AKCG  + A +LF +   +D+V Y +MI
Sbjct: 337  HLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMI 396

Query: 524  AGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEYSI 345
             G  +HGRG EA+ +F+++  +G+ PD + F ++L+ACS AGLV+EG  YF  M+++Y I
Sbjct: 397  QGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCI 456

Query: 344  LPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEIGEIA 165
             P  DHY CMVDLL R+G I DAY  I  +  P EP+AG WGALL AC++Y + E+GEI 
Sbjct: 457  SPLPDHYACMVDLLSRSGHIRDAYELIKLI--PWEPHAGAWGALLGACKLYGDSELGEIV 514

Query: 164  SKHLLEIEPENAGNYVLLASSYAKARKWKQVECVRGLMKSRGTTKSSGFSQI 9
            +  L E+EP NA NYVLL+  YA A +W  V  VR  M+ R   K  G S+I
Sbjct: 515  ANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566



 Score =  108 bits (271), Expect = 2e-21
 Identities = 90/319 (28%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
 Frame = -1

Query: 1193 AERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKR------IPDRNDFTWEAMISGY 1032
            A  VF R+       WNTLI    +        S F R      +PD   FT+ ++I   
Sbjct: 81   ASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPD--SFTYPSVIKAC 138

Query: 1031 ANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAARRVFDGMFRMDVVS 852
            +   +  + + L           D +  V T++I  Y KCG+I  AR+VFDGM   +VVS
Sbjct: 139  SGTCKAREGKSL--HGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVS 196

Query: 851  WTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTHLGSVELARWIKEY 672
            WTAM+  Y   G  VEA  LF  M         N ++ +S++     +G +  AR + + 
Sbjct: 197  WTAMLVGYVAVGDVVEARKLFDEM------PHRNVASWNSMLQGFVKMGDLSGARGVFDA 250

Query: 671  IYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYSTMIAGFGMHGRGVE 492
            +  +     N  + T +ID +AK G+   A  LF    +KD+V +S +I+G+  +G   +
Sbjct: 251  MPEK-----NVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQ 305

Query: 491  ALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEYSILPTADHYM-CM 315
            AL +F ++    V+PD    V ++SA +  G + E  ++ D    +  I    DH +  +
Sbjct: 306  ALRVFLEMELMNVKPDEFILVSLMSASAQLGHL-ELAQWVDSYVSKICIDLQQDHVIAAL 364

Query: 314  VDLLGRAGRIADAYRTIVE 258
            +D+  + G +  A +   E
Sbjct: 365  LDMNAKCGNMERALKLFDE 383



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
 Frame = -1

Query: 896 ARRVFDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSAC 717
           A  VF  +     V W  +I ++CQ  L+   +  F  M   G    P+  T  SV+ AC
Sbjct: 81  ASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHG--ALPDSFTYPSVIKAC 138

Query: 716 THLGSVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCY 537
           +        + +    +  G +  + +  T+LIDM+ KCGE  +A ++F    D+++V +
Sbjct: 139 SGTCKAREGKSLHGSAFRCGVD-QDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSW 197

Query: 536 STMIAGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQK 357
           + M+ G+   G  VEA ++F ++    V   N     +L      G ++     FD M +
Sbjct: 198 TAMLVGYVAVGDVVEARKLFDEMPHRNVASWN----SMLQGFVKMGDLSGARGVFDAMPE 253

Query: 356 EYSILPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEI 177
           +  +      +  M+D   +AG +A A R + +    +E +   W AL+S    Y    +
Sbjct: 254 KNVV-----SFTTMIDGYAKAGDMA-AARFLFDC--SLEKDVVAWSALISG---YVQNGL 302

Query: 176 GEIASKHLLEIEPENA--GNYVLLASSYAKAR 87
              A +  LE+E  N     ++L++   A A+
Sbjct: 303 PNQALRVFLEMELMNVKPDEFILVSLMSASAQ 334


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  345 bits (886), Expect = 1e-92
 Identities = 175/415 (42%), Positives = 275/415 (66%)
 Frame = -1

Query: 1250 VRVQTKLIDFYGKCGLMEEAERVFDRISERDVQAWNTLISGFVKDGNMEAAKSFFKRIPD 1071
            + V+T L+DFY K G ME A ++FD ++ER+V +WN++++G++K G+ME A S F+++P+
Sbjct: 22   IYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPE 81

Query: 1070 RNDFTWEAMISGYANVGRMDDAQKLFXXXXXXXXXXDMNAVVCTAMITGYAKCGDIEAAR 891
            RN  +W AMISG+   G +D A+  F            N V    MI+GY+KCGD+++A 
Sbjct: 82   RNFASWNAMISGHVEFGDIDSARSFFDAMPQK------NNVSWMTMISGYSKCGDVDSAC 135

Query: 890  RVFDGMFRMDVVSWTAMISAYCQAGLYVEAVDLFKLMLKIGGETKPNESTVSSVVSACTH 711
             +FD +   D++ + AMI+ Y Q     EA++LF  ML      +P+E T++SV+SAC+ 
Sbjct: 136  ELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQ 195

Query: 710  LGSVELARWIKEYIYSRGKELLNTHTVTALIDMHAKCGEPDEAYELFKQWKDKDIVCYST 531
            LG +    WI+ Y+   G E+ + H  TAL+D++AKCG  D+AYELF   + KD+V Y+ 
Sbjct: 196  LGDLRFGPWIESYMRRLGIEM-DGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTA 254

Query: 530  MIAGFGMHGRGVEALEIFSQLREDGVRPDNICFVIVLSACSHAGLVNEGCRYFDVMQKEY 351
            MI G G++G+ ++A+++F ++ +  + P++I F+ +L+A +HAGLV EG R F  M K+Y
Sbjct: 255  MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSM-KKY 313

Query: 350  SILPTADHYMCMVDLLGRAGRIADAYRTIVEVMPPVEPNAGVWGALLSACRVYHNVEIGE 171
            +++P+ DHY  MVDL GRAGR+ +A   I  +  P++P+AGVWGALL ACR+++NVE GE
Sbjct: 314  NLVPSVDHYGIMVDLFGRAGRLQEALELIKSM--PMQPHAGVWGALLLACRLHNNVEFGE 371

Query: 170  IASKHLLEIEPENAGNYVLLASSYAKARKWKQVECVRGLMKSRGTTKSSGFSQIE 6
            IA++H  E+EP+  G   LL++ YA   +W  V+ +R + K +G +K  G S +E
Sbjct: 372  IAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWME 426