BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003044
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299486.1| high mobility group family [Populus trichoca...    97   1e-18
gb|ABK95985.1| unknown [Populus trichocarpa]                           97   1e-18
ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [S...    95   7e-18
ref|NP_001144208.1| hypothetical protein [Zea mays] gi|195638446...    93   2e-17
ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-...    92   4e-17

>ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
           gi|222846744|gb|EEE84291.1| high mobility group family
           [Populus trichocarpa]
          Length = 498

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = -3

Query: 340 ALVEQNNNVPEIGKIAGEEWKNMSEEQRKPYEEIAKKQKEEYLKEMEHYKQKKXXXXXXX 161
           AL+ +N NV E+ KIAGEEWKNM+E+Q++PYEEIAKK KE+Y +EME YKQ K       
Sbjct: 316 ALLAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEMEAYKQNKDEEAMNL 375

Query: 160 XXXXXELMKIQKQEALQML 104
                ELMK+QKQEALQ+L
Sbjct: 376 KKEGEELMKLQKQEALQLL 394


>gb|ABK95985.1| unknown [Populus trichocarpa]
          Length = 232

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = -3

Query: 340 ALVEQNNNVPEIGKIAGEEWKNMSEEQRKPYEEIAKKQKEEYLKEMEHYKQKKXXXXXXX 161
           AL+ +N NV E+ KIAGEEWKNM+E+Q++PYEEIAKK KE+Y +EME YKQ K       
Sbjct: 50  ALLAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQEMEAYKQNKDEEAMNL 109

Query: 160 XXXXXELMKIQKQEALQML 104
                ELMK+QKQEALQ+L
Sbjct: 110 KKEGEELMKLQKQEALQLL 128


>ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
           gi|241933466|gb|EES06611.1| hypothetical protein
           SORBIDRAFT_04g009610 [Sorghum bicolor]
          Length = 488

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/79 (60%), Positives = 56/79 (70%)
 Frame = -3

Query: 340 ALVEQNNNVPEIGKIAGEEWKNMSEEQRKPYEEIAKKQKEEYLKEMEHYKQKKXXXXXXX 161
           ALV +  NVPEIGKI GEEWKNM+E Q+ PYE++A+KQKEEY K+ME YKQKK       
Sbjct: 305 ALVAEKKNVPEIGKITGEEWKNMTEAQKAPYEKVARKQKEEYQKQMEVYKQKKIEEAASL 364

Query: 160 XXXXXELMKIQKQEALQML 104
                E  KI KQEALQ+L
Sbjct: 365 EKEEEEHKKIMKQEALQLL 383


>ref|NP_001144208.1| hypothetical protein [Zea mays] gi|195638446|gb|ACG38691.1|
           hypothetical protein [Zea mays]
           gi|413936487|gb|AFW71038.1| hypothetical protein
           ZEAMMB73_874920 [Zea mays]
          Length = 487

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 337 LVEQNNNVPEIGKIAGEEWKNMSEEQRKPYEEIAKKQKEEYLKEMEHYKQKKXXXXXXXX 158
           LV +  NVPEIGKI GEEWKNM+E QR PYEE+A+KQKEEY K+ME YKQKK        
Sbjct: 305 LVAEKKNVPEIGKITGEEWKNMTEGQRAPYEEVARKQKEEYHKQMEVYKQKKAEEAASLE 364

Query: 157 XXXXELMKIQKQEALQML 104
               E  KI K EALQ+L
Sbjct: 365 KEEQEHKKIMKHEALQLL 382


>ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
           distachyon]
          Length = 537

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/79 (58%), Positives = 55/79 (69%)
 Frame = -3

Query: 340 ALVEQNNNVPEIGKIAGEEWKNMSEEQRKPYEEIAKKQKEEYLKEMEHYKQKKXXXXXXX 161
           ALV +  NVPEIGKI GEEWK+M++ Q+ PYEE+A KQKEEY K+ME YKQKK       
Sbjct: 346 ALVAEKKNVPEIGKITGEEWKSMTDAQKAPYEEVASKQKEEYHKQMEVYKQKKLEETQSL 405

Query: 160 XXXXXELMKIQKQEALQML 104
                E  K+ KQEALQ+L
Sbjct: 406 EKEEEEQKKVMKQEALQLL 424