BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003040
         (3753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV87353.1| phytochrome A [Aquilegia formosa]                     1948   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1830   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1828   0.0  
ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|2228572...  1788   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1785   0.0  

>gb|ACV87353.1| phytochrome A [Aquilegia formosa]
          Length = 1130

 Score = 1948 bits (5046), Expect = 0.0
 Identities = 962/1107 (86%), Positives = 1037/1107 (93%), Gaps = 1/1107 (0%)
 Frame = -3

Query: 3649 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNAGSVQQQPKSDKLTTAYLHQIQK 3470
            KHSARVIAQTTVDAKLHA+FEE+GSSFDYSR+V V+N+ +  QQ +SDK+TTAYLHQIQK
Sbjct: 17   KHSARVIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSN--QQTRSDKVTTAYLHQIQK 74

Query: 3469 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3290
            GK IQPFGCLLALD+KTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDL+TI TSP
Sbjct: 75   GKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLKTILTSP 134

Query: 3289 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3110
            SASALQKAL F+DV+LLNPILVHCK+SGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 135  SASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 194

Query: 3109 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2930
            ALQSYKLAAKAI RLQSLP GS++RLCD VV+EV++LTGYDRVM YKFH+DDHGEVVSE 
Sbjct: 195  ALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYKFHDDDHGEVVSET 254

Query: 2929 TKQGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2750
            TK+GL PYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKL F+LTLCGS 
Sbjct: 255  TKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLPFELTLCGST 314

Query: 2749 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTR-PSQPQKRKRLWGLVVCHNTTP 2573
            LRAPHSCHLQYMENMDSIASLVMAVV+NDGDE++ +    SQ QKRKRLWGLVVCHNTTP
Sbjct: 315  LRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRKRLWGLVVCHNTTP 374

Query: 2572 RFVPFPLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQS 2393
            RFVPFPLRYACEFLIQVFAIHV+KEFELENQILEKNILRTQTLLCDMLMRN P+GIVSQS
Sbjct: 375  RFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDMLMRNAPIGIVSQS 434

Query: 2392 PNIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFP 2213
            PNIMDLVKCDGAALLY+NKIWRLG SP+E  IRDIASWLS+YHMDSTGLS+DSLYDAGFP
Sbjct: 435  PNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDSTGLSTDSLYDAGFP 494

Query: 2212 GALSIADTVCGMAAVRINSKDMLFWFRSHTAAEVRWGGAKHDPGEKDDGRKMHPRSSFKA 2033
            GALSI DTVCGMAAVRINSKDMLFWFRSHTA E+RWGGAKH+PGEKDDGRKMHPRSSFKA
Sbjct: 495  GALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKDDGRKMHPRSSFKA 554

Query: 2032 FLEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELE 1853
            FLEVVKTRS PWKD+EMDAIHSLQLILR+ FKDIET DGNT  IHSQLD LKI+GMEELE
Sbjct: 555  FLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQLDKLKIDGMEELE 614

Query: 1852 AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDT 1673
            AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVD+VIGKHFLKLVE SS +T
Sbjct: 615  AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGKHFLKLVEESSAET 674

Query: 1672 VKRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDIT 1493
            VKRMLHLAL+GKEEQNVHFEMKTHGS+K+ GPVSLVVNACASRDLQENVVGVCFVA D+T
Sbjct: 675  VKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRDLQENVVGVCFVAHDLT 734

Query: 1492 SQKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDK 1313
            +QKMVMDKFTRIEGDYKAILQNPSPL PPIFG+DEFGWCCEWNPAMTKLSGW+R+E+MDK
Sbjct: 735  NQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNPAMTKLSGWDRAEVMDK 794

Query: 1312 MLLGEIFGTHMACCRLKNQEIFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVS 1133
            MLLGEIFGT+M+CCRLKNQE FVNLGIVLNGAMMGEET+KVSFGFFGRNGNYVDCLLSV+
Sbjct: 795  MLLGEIFGTNMSCCRLKNQETFVNLGIVLNGAMMGEETDKVSFGFFGRNGNYVDCLLSVT 854

Query: 1132 KKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIF 953
            KKVDGEG VTGVFCFL  VS+ELQQALHVQRLSEQ+A++KSK L YMKRQIRNPLSGIIF
Sbjct: 855  KKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSKGLTYMKRQIRNPLSGIIF 914

Query: 952  SRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLNDTDLENIMDGYVDLEMVEFTLQEVLFT 773
            S KM+  TDL EEQKQLLHTSMHCQRQLHKVL DTDLE IMDGYVD +M+EFTL+EVL T
Sbjct: 915  SGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMDGYVDSKMIEFTLREVLIT 974

Query: 772  SISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGIS 593
             ISQVKI+SD ++LR + DSL++ MTE  YGD LRLQQVLADF+LVSVKFTP GGQ+GIS
Sbjct: 975  CISQVKIESDRRSLRFTNDSLEDFMTETLYGDSLRLQQVLADFMLVSVKFTPKGGQIGIS 1034

Query: 592  ASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLM 413
            ASLTR+RLGESVHLA L+LRLTHSGGGI EELLS MFESDS+ SE+G+SLLVCRKLLK+M
Sbjct: 1035 ASLTRNRLGESVHLAHLELRLTHSGGGIPEELLSHMFESDSEASEEGVSLLVCRKLLKVM 1094

Query: 412  NGDVQYLREAGKSSFIISVEFASAPKA 332
            NGDVQYLREAGKSSFII VE ASA K+
Sbjct: 1095 NGDVQYLREAGKSSFIIPVELASASKS 1121


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1830 bits (4739), Expect = 0.0
 Identities = 893/1105 (80%), Positives = 1005/1105 (90%)
 Frame = -3

Query: 3649 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNAGSVQQQPKSDKLTTAYLHQIQK 3470
            KHSAR+IAQTTVDAKLHA FEESGSSFDYS +V  + AG   QQP+SDK+TTAYLH IQK
Sbjct: 17   KHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQK 75

Query: 3469 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3290
            GK IQPFG LLALDDKT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTD+RTIF+ P
Sbjct: 76   GKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGP 135

Query: 3289 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3110
            SASAL KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 136  SASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAG 195

Query: 3109 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2930
            ALQSYKLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+
Sbjct: 196  ALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 255

Query: 2929 TKQGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2750
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS 
Sbjct: 256  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGST 315

Query: 2749 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPR 2570
            LRAPHSCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+TTPR
Sbjct: 316  LRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPR 375

Query: 2569 FVPFPLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2390
            FVPFPLRYACEFL QVFAIHV+KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSP
Sbjct: 376  FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSP 435

Query: 2389 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPG 2210
            N+MDLVKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+YHMDSTGLS+DSLYDAG+PG
Sbjct: 436  NVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPG 495

Query: 2209 ALSIADTVCGMAAVRINSKDMLFWFRSHTAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 2030
            AL++ D VCGMAAV+I SKD LFWFRSHTAAEVRWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 496  ALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 555

Query: 2029 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1850
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L+DLKI GM+ELEA
Sbjct: 556  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEA 615

Query: 1849 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTV 1670
            VT+EMVRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE SS DTV
Sbjct: 616  VTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTV 675

Query: 1669 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1490
            K+MLHLAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITS
Sbjct: 676  KKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITS 735

Query: 1489 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1310
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKM
Sbjct: 736  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKM 795

Query: 1309 LLGEIFGTHMACCRLKNQEIFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSK 1130
            LLGE+FGTHMACCRLKN+E FV LGIVLN  M G E+EKVSFGFF ++G YV+CLLSVSK
Sbjct: 796  LLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSK 855

Query: 1129 KVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFS 950
            K+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ KALAY+KRQI+NPLSGIIFS
Sbjct: 856  KLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFS 915

Query: 949  RKMLEETDLGEEQKQLLHTSMHCQRQLHKVLNDTDLENIMDGYVDLEMVEFTLQEVLFTS 770
            RKM+E+TDLGEEQ+Q+LHTS  CQRQL K+L+D DL++I++GY+DLEMVEFTL+EVL  S
Sbjct: 916  RKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVAS 975

Query: 769  ISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISA 590
            ISQV IKS+ K ++I  D+ + IMTE  YGD LRLQQVLADF+L+SV FTP GGQL ++A
Sbjct: 976  ISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAA 1035

Query: 589  SLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMN 410
            SL +DRLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D SE+GISLL+ RKL+KLMN
Sbjct: 1036 SLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMN 1095

Query: 409  GDVQYLREAGKSSFIISVEFASAPK 335
            GDVQYLREAGKS+FIIS+E A+A K
Sbjct: 1096 GDVQYLREAGKSTFIISIELAAARK 1120


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1828 bits (4735), Expect = 0.0
 Identities = 892/1105 (80%), Positives = 1005/1105 (90%)
 Frame = -3

Query: 3649 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNAGSVQQQPKSDKLTTAYLHQIQK 3470
            KHSAR+IAQTTVDAKLHA FEESGSSFDYS +V  + AG   QQP+SDK+TTAYLH IQK
Sbjct: 17   KHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQK 75

Query: 3469 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3290
            GK IQPFG LLALD+KT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTD+RTIF+ P
Sbjct: 76   GKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGP 135

Query: 3289 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3110
            SASAL KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 136  SASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAG 195

Query: 3109 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2930
            ALQSYKLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+
Sbjct: 196  ALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 255

Query: 2929 TKQGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2750
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS 
Sbjct: 256  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGST 315

Query: 2749 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPR 2570
            LRAPHSCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+TTPR
Sbjct: 316  LRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPR 375

Query: 2569 FVPFPLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2390
            FVPFPLRYACEFL QVFAIHV+KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSP
Sbjct: 376  FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSP 435

Query: 2389 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPG 2210
            N+MDLVKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+YHMDSTGLS+DSLYDAG+PG
Sbjct: 436  NVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPG 495

Query: 2209 ALSIADTVCGMAAVRINSKDMLFWFRSHTAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 2030
            AL++ D VCGMAAV+I SKD LFWFRSHTAAEVRWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 496  ALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 555

Query: 2029 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1850
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L+DLKI GM+ELEA
Sbjct: 556  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEA 615

Query: 1849 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTV 1670
            VT+EMVRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE SS DTV
Sbjct: 616  VTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTV 675

Query: 1669 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1490
            K+MLHLAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITS
Sbjct: 676  KKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITS 735

Query: 1489 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1310
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKM
Sbjct: 736  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKM 795

Query: 1309 LLGEIFGTHMACCRLKNQEIFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSK 1130
            LLGE+FGTHMACCRLKN+E FV LGIVLN  M G E+EKVSFGFF ++G YV+CLLSVSK
Sbjct: 796  LLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSK 855

Query: 1129 KVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFS 950
            K+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ KALAY+KRQI+NPLSGIIFS
Sbjct: 856  KLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFS 915

Query: 949  RKMLEETDLGEEQKQLLHTSMHCQRQLHKVLNDTDLENIMDGYVDLEMVEFTLQEVLFTS 770
            RKM+E+TDLGEEQ+Q+LHTS  CQRQL K+L+D DL++I++GY+DLEMVEFTL+EVL  S
Sbjct: 916  RKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVAS 975

Query: 769  ISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISA 590
            ISQV IKS+ K ++I  D+ + IMTE  YGD LRLQQVLADF+L+SV FTP GGQL ++A
Sbjct: 976  ISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAA 1035

Query: 589  SLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMN 410
            SL +DRLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D SE+GISLL+ RKL+KLMN
Sbjct: 1036 SLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMN 1095

Query: 409  GDVQYLREAGKSSFIISVEFASAPK 335
            GDVQYLREAGKS+FIIS+E A+A K
Sbjct: 1096 GDVQYLREAGKSTFIISIELAAARK 1120


>ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|222857289|gb|EEE94836.1|
            phytochrome [Populus trichocarpa]
          Length = 1126

 Score = 1788 bits (4632), Expect = 0.0
 Identities = 873/1107 (78%), Positives = 990/1107 (89%)
 Frame = -3

Query: 3649 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNAGSVQQQPKSDKLTTAYLHQIQK 3470
            +HSAR+IAQTTVDAKLHA FEESGSSFDYS +V V+++    Q P+SDK+TT YLH IQK
Sbjct: 17   RHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQK 76

Query: 3469 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3290
            GK IQPFGCLLALD+KT KV+AYSENAPE+LTMVSHAVPSVGEHPVLGIGTD+RTIFT+P
Sbjct: 77   GKLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAP 136

Query: 3289 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3110
            SASALQKA+GF DVSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 137  SASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196

Query: 3109 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2930
            ALQSYKLAAKAITRLQSLP GSMERLCD +VQEV+ELTGYDR MAYKFH+DDHGEVVSEV
Sbjct: 197  ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256

Query: 2929 TKQGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2750
            TK G+EPYLGLHYPATDIPQA+RFLFMKNK+RMI DC AKHV+VLQDEKL FDLTLCGS 
Sbjct: 257  TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316

Query: 2749 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPR 2570
            LRAPHSCHLQYMENM+SIASLVMAVVVNDGDED ++     PQKRKRLWGLVVCHNT+PR
Sbjct: 317  LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPR 376

Query: 2569 FVPFPLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2390
            FVPFPLRYACEFL QVFAIHV+KE ELENQI+EKNILRTQTLLCDMLMR+ PLGIV+QSP
Sbjct: 377  FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436

Query: 2389 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPG 2210
            NIMDLVKCDGA L Y+NKIWRLG +P+++Q++DIA WLS+YHMDSTGLS+DSLYDAG+PG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 2209 ALSIADTVCGMAAVRINSKDMLFWFRSHTAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 2030
            AL++ D VCGMAAVRI SKDMLFWFRS TAAE+RWGGAKH+PGEKDDGR+MHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 2029 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1850
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKDIET D +TK IH++L DLKI GM+ELEA
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 1849 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTV 1670
            VT+EMVRLIETATVPILAVD++GL+NGWNTKI+ELTGL VD+ IGKH L LVE SSVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 1669 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1490
            KRML LAL GKEEQN+ FE+KTHGS+ E GP+ LVVNACASRDL ENVVGVCFV QDIT 
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITG 736

Query: 1489 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1310
            QKMVMDKFTRIEGDYKAI+QN +PLIPPIFG+DEFGWC EWNPAMT L+GW+R E++DKM
Sbjct: 737  QKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKM 796

Query: 1309 LLGEIFGTHMACCRLKNQEIFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSK 1130
            LLGE+FG +MACCRLKNQE FVNLG+VLN AM G+E+EKVSFGFF R G YV+CLL VSK
Sbjct: 797  LLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSK 856

Query: 1129 KVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFS 950
            K+D EGAVTGVFCFLQ+ S+ELQQALHVQRLSEQTA+K+ KALAY+KRQI NPLSGIIFS
Sbjct: 857  KLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFS 916

Query: 949  RKMLEETDLGEEQKQLLHTSMHCQRQLHKVLNDTDLENIMDGYVDLEMVEFTLQEVLFTS 770
             KM+E T+LG EQK+LLHTS  CQ QL K+L+D+DL++I++GY+DLEMVEFTL+EVL  +
Sbjct: 917  GKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAA 976

Query: 769  ISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISA 590
             SQV +KS+EK +RI  D+ +E M E  YGD +RLQQVLADF+ +SV FTP+GG L +SA
Sbjct: 977  TSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPSGGLLSVSA 1036

Query: 589  SLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMN 410
            SLT+D+LG+SV+L  L+LR+ H G GI E LL +MF  D+D S +GISL++ RKL+KLMN
Sbjct: 1037 SLTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEGISLVISRKLVKLMN 1096

Query: 409  GDVQYLREAGKSSFIISVEFASAPKAQ 329
            GDV+Y+REAGKSSFIISVE A   K+Q
Sbjct: 1097 GDVRYMREAGKSSFIISVELAGGHKSQ 1123


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1785 bits (4624), Expect = 0.0
 Identities = 869/1107 (78%), Positives = 985/1107 (88%)
 Frame = -3

Query: 3649 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNAGSVQQQPKSDKLTTAYLHQIQK 3470
            +HSAR+I+QT VDAKLHA FEESGSSFDYS +V V+++  +   P+SDK+TTAYLH IQK
Sbjct: 17   RHSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQK 76

Query: 3469 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3290
            GK IQPFGCLLALD+KT KVIAYSENAPEMLTMVSHAVPSVG+HPVLGIGTD+RTIFT+P
Sbjct: 77   GKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAP 136

Query: 3289 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3110
            SASALQKALGF DVSLLNPILVHCKTSGKPFYAI HRVTGS IIDFEPVKPYE+PMTAAG
Sbjct: 137  SASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAG 196

Query: 3109 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2930
            ALQSYKLAAKAI+RLQSLP GSMERLCD +VQEV+ELTGYDRVM YKFH+DDHGEV+SEV
Sbjct: 197  ALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEV 256

Query: 2929 TKQGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2750
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMI DCRAKHV+VLQDEKL  +LTLCGS 
Sbjct: 257  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGST 316

Query: 2749 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNTTPR 2570
            LRAPHSCHLQYMENMDS+ASLVMAVVVN+GDEDD+S    QPQKRKRLWGLVVCHNTTPR
Sbjct: 317  LRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPR 376

Query: 2569 FVPFPLRYACEFLIQVFAIHVSKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2390
            FVPFPLRYACEFL QVFAIHV+KE ELENQI+EKNILRTQTLLCDML+R+ PLGI++QSP
Sbjct: 377  FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSP 436

Query: 2389 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDYHMDSTGLSSDSLYDAGFPG 2210
            NI DLVKCDGAALLYKNKIWRLG +P+++QIRDIA WLS+YHMDSTGLS+DSLYDAG+  
Sbjct: 437  NITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSA 496

Query: 2209 ALSIADTVCGMAAVRINSKDMLFWFRSHTAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 2030
            ALS+ D VCGMAAVRI SKDMLFWFR+ TAAE+RWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 497  ALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 556

Query: 2029 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1850
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD ET D + KAIHS+L DLKI GM+ELEA
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEA 616

Query: 1849 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGSSVDTV 1670
            VT+EMVRLIETATVPILAVD++GL+NGWNTKIAELTGLPVD+ IGKH L LVE  S+D V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLV 676

Query: 1669 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1490
            K ML  AL GKEEQN+ FE+KTHGS+ E GP+SLVVNACASRD+ ENVVGVCFVAQDIT 
Sbjct: 677  KNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITG 736

Query: 1489 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1310
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KL+GW+R E+MDKM
Sbjct: 737  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKM 796

Query: 1309 LLGEIFGTHMACCRLKNQEIFVNLGIVLNGAMMGEETEKVSFGFFGRNGNYVDCLLSVSK 1130
            LLGE+FG + ACC LKNQE FVNLG+++N AM  +  EKVSF FF RN  YV+CLL VSK
Sbjct: 797  LLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVSK 856

Query: 1129 KVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSKALAYMKRQIRNPLSGIIFS 950
            K+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ K LAY+KRQI+NPLSGI+FS
Sbjct: 857  KLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMFS 916

Query: 949  RKMLEETDLGEEQKQLLHTSMHCQRQLHKVLNDTDLENIMDGYVDLEMVEFTLQEVLFTS 770
            RK++E T+L  EQKQLLHTS  CQRQL K+L+D+D+++I++GY+DLEMVEFTL EVL  +
Sbjct: 917  RKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIAA 976

Query: 769  ISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLADFILVSVKFTPTGGQLGISA 590
            ISQV IKS  K +RI  D+ + IMTE  YGD +RLQQVLADF+  SV FTP GGQL I+A
Sbjct: 977  ISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPGGQLTIAA 1036

Query: 589  SLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSDTSEDGISLLVCRKLLKLMN 410
              T+D+LG+SVHL  L+LR+TH+GGGI E LL++MF SD D S++G+SL + RKL+KLMN
Sbjct: 1037 KFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEGVSLFISRKLVKLMN 1096

Query: 409  GDVQYLREAGKSSFIISVEFASAPKAQ 329
            GDVQYLREAGKSSFI++VE A+  K+Q
Sbjct: 1097 GDVQYLREAGKSSFIVTVELAAGRKSQ 1123