BLASTX nr result

ID: Coptis24_contig00003033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003033
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262807.1| PREDICTED: uncharacterized protein LOC100265...   220   4e-55
ref|XP_002331516.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-53
gb|ABK95443.1| unknown [Populus trichocarpa]                          213   5e-53
ref|XP_002518447.1| bcr-associated protein, bap, putative [Ricin...   209   1e-51
ref|XP_003605958.1| hypothetical protein MTR_4g049540 [Medicago ...   208   2e-51

>ref|XP_002262807.1| PREDICTED: uncharacterized protein LOC100265893 [Vitis vinifera]
           gi|302144107|emb|CBI23212.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  220 bits (561), Expect = 4e-55
 Identities = 125/223 (56%), Positives = 154/223 (69%), Gaps = 3/223 (1%)
 Frame = -1

Query: 963 MIQLLFTVISIEMGLILILMFKTPLRKVVIMSLDXXXXXXXXXXXKTIGGTVFIVLMSSV 784
           MIQLLFTVI  EM +I++L+FKTPLRK+VIM LD           KT+  TV +VL+SSV
Sbjct: 1   MIQLLFTVIFAEMAMIMVLLFKTPLRKLVIMGLDRVKRGRGPIMVKTVAATVLVVLISSV 60

Query: 783 YSILKIQKRSFDSTGGVLNSTDQVLFSKHLLEASLMGFSLFLALMIDRLHHYIRELRMLR 604
           YS++KI+KR  D    V+N TDQVL +KHLLE SLMGF+LFLALMIDRLHHYIRELR+ R
Sbjct: 61  YSMMKIRKRGIDDD--VVNPTDQVLMAKHLLETSLMGFTLFLALMIDRLHHYIRELRLRR 118

Query: 603 KNMEAVKKQNRAVEDGK---SSDLKNLEEEVAGLKTKVKQLESDSQTXXXXXXXXXXXXX 433
           K+MEA+KKQNR  EDGK   S+++K +EEE+A L  K+KQLES+ +T             
Sbjct: 119 KSMEAIKKQNRGFEDGKTGGSAEIKAMEEEMAALGAKLKQLESEIETKTKEAKAAETNAV 178

Query: 432 XXXKQSEGFLLEYDXXXXXXXXXXXXXQSIDQMLSHSDSKKSS 304
              KQSEGFLLEYD             QS+D+ LSHS SKK++
Sbjct: 179 ALRKQSEGFLLEYDRLLEENQNLRNQLQSLDRRLSHSGSKKNT 221


>ref|XP_002331516.1| predicted protein [Populus trichocarpa] gi|222873740|gb|EEF10871.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  214 bits (544), Expect = 4e-53
 Identities = 124/220 (56%), Positives = 150/220 (68%)
 Frame = -1

Query: 963 MIQLLFTVISIEMGLILILMFKTPLRKVVIMSLDXXXXXXXXXXXKTIGGTVFIVLMSSV 784
           MIQLLF VI  EM +IL+ +FK+PLRK +IMSLD           KT+ GTVF+VL+SSV
Sbjct: 1   MIQLLFAVIFSEMAMILLFVFKSPLRKFLIMSLDRLKRGRGPVMVKTVAGTVFLVLISSV 60

Query: 783 YSILKIQKRSFDSTGGVLNSTDQVLFSKHLLEASLMGFSLFLALMIDRLHHYIRELRMLR 604
           YS++KIQKR  D  GGV+N TDQVL +KHLLEA+LMG  LFL+LMIDRLHHYIRELRM R
Sbjct: 61  YSMVKIQKRGID-VGGVVNPTDQVLMAKHLLEATLMGSILFLSLMIDRLHHYIRELRMRR 119

Query: 603 KNMEAVKKQNRAVEDGKSSDLKNLEEEVAGLKTKVKQLESDSQTXXXXXXXXXXXXXXXX 424
           K+MEAVKKQNR+ EDGK  + K LE EV+ L+ K+KQL+S+ +                 
Sbjct: 120 KSMEAVKKQNRSFEDGKVEETKALETEVSTLQEKLKQLQSELEVKSKEVNTSEANAAALS 179

Query: 423 KQSEGFLLEYDXXXXXXXXXXXXXQSIDQMLSHSDSKKSS 304
           KQSEGFLLEYD             QS+D  LS S SKK++
Sbjct: 180 KQSEGFLLEYDRLLEENQNLRSQLQSMDLGLSRSTSKKNT 219


>gb|ABK95443.1| unknown [Populus trichocarpa]
          Length = 219

 Score =  213 bits (543), Expect = 5e-53
 Identities = 124/220 (56%), Positives = 146/220 (66%)
 Frame = -1

Query: 963 MIQLLFTVISIEMGLILILMFKTPLRKVVIMSLDXXXXXXXXXXXKTIGGTVFIVLMSSV 784
           MIQLLFTVI  EM +IL+ +FKTPLRK++IMSLD           KT+ GTVF+VLMSSV
Sbjct: 1   MIQLLFTVIFSEMAMILLFVFKTPLRKLLIMSLDRVKRGRGPVMVKTVAGTVFVVLMSSV 60

Query: 783 YSILKIQKRSFDSTGGVLNSTDQVLFSKHLLEASLMGFSLFLALMIDRLHHYIRELRMLR 604
           YS++KIQKR  D  GG +N TDQVL +KHLLEA+LMG  LFL LMIDRLHHYIRELRM R
Sbjct: 61  YSMVKIQKRWIDD-GGAVNPTDQVLLAKHLLEATLMGSILFLGLMIDRLHHYIRELRMRR 119

Query: 603 KNMEAVKKQNRAVEDGKSSDLKNLEEEVAGLKTKVKQLESDSQTXXXXXXXXXXXXXXXX 424
           K ME VKKQNR+ EDGK  + K LE E + L+ K+KQLES+ +                 
Sbjct: 120 KTMEDVKKQNRSFEDGKVEETKALEAEASTLREKLKQLESELEIKTKEVNTSEANAVALS 179

Query: 423 KQSEGFLLEYDXXXXXXXXXXXXXQSIDQMLSHSDSKKSS 304
           KQSEGFLLEYD             QS+D   S S SKK++
Sbjct: 180 KQSEGFLLEYDRLLEENQNLRSQLQSLDLRFSRSTSKKNT 219


>ref|XP_002518447.1| bcr-associated protein, bap, putative [Ricinus communis]
           gi|223542292|gb|EEF43834.1| bcr-associated protein, bap,
           putative [Ricinus communis]
          Length = 218

 Score =  209 bits (532), Expect = 1e-51
 Identities = 121/220 (55%), Positives = 146/220 (66%)
 Frame = -1

Query: 963 MIQLLFTVISIEMGLILILMFKTPLRKVVIMSLDXXXXXXXXXXXKTIGGTVFIVLMSSV 784
           MIQLLFT I  EM LILIL+FKTP RK+V+M LD           KT+ GT+ +VL+SSV
Sbjct: 1   MIQLLFTGIFSEMALILILVFKTPFRKLVLMGLDRVKRGSGPIIVKTVAGTILVVLISSV 60

Query: 783 YSILKIQKRSFDSTGGVLNSTDQVLFSKHLLEASLMGFSLFLALMIDRLHHYIRELRMLR 604
           YS++KIQKR  D   G +N TDQVL +KHLLEA+LMG  LFLALMIDRLHHYIRELRM R
Sbjct: 61  YSMMKIQKRGIDE--GFVNPTDQVLMAKHLLEATLMGAMLFLALMIDRLHHYIRELRMRR 118

Query: 603 KNMEAVKKQNRAVEDGKSSDLKNLEEEVAGLKTKVKQLESDSQTXXXXXXXXXXXXXXXX 424
           K+MEAVKKQ+R  EDGK+ + K L EE+  L+ ++KQLES+ +                 
Sbjct: 119 KSMEAVKKQSRVAEDGKAEENKALGEEMTTLRARLKQLESELEVKTKEAHASETNAVALR 178

Query: 423 KQSEGFLLEYDXXXXXXXXXXXXXQSIDQMLSHSDSKKSS 304
           KQSEGFLLEYD             QS+D  LS S SKK++
Sbjct: 179 KQSEGFLLEYDRLLEENQNLRNQLQSLDLRLSRSGSKKNT 218


>ref|XP_003605958.1| hypothetical protein MTR_4g049540 [Medicago truncatula]
           gi|355507013|gb|AES88155.1| hypothetical protein
           MTR_4g049540 [Medicago truncatula]
           gi|388506748|gb|AFK41440.1| unknown [Medicago
           truncatula]
          Length = 221

 Score =  208 bits (529), Expect = 2e-51
 Identities = 120/223 (53%), Positives = 150/223 (67%), Gaps = 3/223 (1%)
 Frame = -1

Query: 963 MIQLLFTVISIEMGLILILMFKTPLRKVVIMSLDXXXXXXXXXXXKTIGGTVFIVLMSSV 784
           M+QLL+T I  EM LIL L+FKTPLRK+VI+SLD            T+G T+ +VL SS+
Sbjct: 1   MLQLLYTAIFGEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPIVVTTVGATLIVVLSSSL 60

Query: 783 YSILKIQKRSFDSTGGVLNSTDQVLFSKHLLEASLMGFSLFLALMIDRLHHYIRELRMLR 604
           YS+ KIQ+R+ ++  GVLN TDQVL SKH+LEASLMGF LFL+LMIDRLHHYIRELR+LR
Sbjct: 61  YSMAKIQQRTVEA--GVLNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 603 KNMEAVKKQNRAVEDGK---SSDLKNLEEEVAGLKTKVKQLESDSQTXXXXXXXXXXXXX 433
           K MEAVKKQ R+ EDGK   + + K L EE+  LK+KVK+LES+ +              
Sbjct: 119 KTMEAVKKQTRSFEDGKNGSTEEQKALTEEITTLKSKVKKLESECEAKGTKEKTLETEVE 178

Query: 432 XXXKQSEGFLLEYDXXXXXXXXXXXXXQSIDQMLSHSDSKKSS 304
              KQSEGFL+EYD             ++IDQ  SH D+KKS+
Sbjct: 179 ALKKQSEGFLMEYDRLLEDNQNLRSQLEAIDQSSSHLDNKKST 221


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