BLASTX nr result
ID: Coptis24_contig00003024
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003024
(1580 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22065.3| unnamed protein product [Vitis vinifera] 319 e-100
ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [V... 319 e-100
ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [C... 268 1e-85
ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [G... 246 2e-75
ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [G... 237 7e-73
>emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 319 bits (817), Expect(2) = e-100
Identities = 186/381 (48%), Positives = 240/381 (62%), Gaps = 4/381 (1%)
Frame = +2
Query: 263 MNHSVR-NWNMEMNHLLPPQENQKRSMGLLDNNEFVELLWQNGQVVQHSQTHRKPGPAHN 439
MNH + +WN+E + P NQK+ MG +E VELLW+NGQVV HSQT RK G A N
Sbjct: 1 MNHPLLPDWNIEGD---VPVTNQKKPMG--QEHELVELLWRNGQVVLHSQTQRKSGLAPN 55
Query: 440 DSEPKKKYVHPM-KDGDSYMNLSTLIEEDETASWIQYPLEDSLDAEFCSNFLYELSNAHP 616
+S+ +K+ M ++G S N S LI+++E+ SWIQYPL+DSLD EFCSN EL P
Sbjct: 56 ESKQVQKHDQTMLRNGGSCGNWSNLIQDEESISWIQYPLDDSLDKEFCSNLFMELPPNDP 115
Query: 617 IEKEKTIKHFEGEKYVKFGASEETNVLTTSSTRPQQPLFRQPTNPIFVENSIPSSRPKVT 796
++ EK ++H E EK V QQP+F+ +P F N +P + +V
Sbjct: 116 VQPEKPVRHSEQEKSVPSS---------------QQPIFKHLGSPEFPGNPMPPPKFQVP 160
Query: 797 DATQKDLSLEGLDRVGNFPHFSRPLKAENGLSNGRIRGSGSG-LVSGGDFGESSVMTIGS 973
+ Q++ S G ++ NFP+FS P ++ G S ++ G GSG + GGD E SVMT+G
Sbjct: 161 GSVQQNCSSGGFGKIVNFPNFSFPGRSNLGSSKAQLGGKGSGNMAQGGDAKEGSVMTVGL 220
Query: 974 SHCGSNQLPNETDLSRVSSNGVGSTGMFQGPVKEDTRKVFPQSERGLTETLETNITXXXX 1153
SHCGSNQ+ NE DLSR SS+GVG+ + G VKE+ ++ Q +R TETLE +T
Sbjct: 221 SHCGSNQVVNEADLSRFSSSGVGTGCLSSGHVKENVMRIVSQGDRRQTETLEPTVTSSSG 280
Query: 1154 XXXXXFIG-TDRQSASIHSHKRKGRDADESEYHSEDAEFESANANKAPPRSGSIRRSRAA 1330
G T +QS +SHKRKGR+A+ESE SE AE ESA NKA RSGS RRSRAA
Sbjct: 281 GGSGSSFGRTYKQSTDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAA 340
Query: 1331 EVHNLSERRRRDRINEKMRAL 1393
EVHNLSERRRRDRINEKM+AL
Sbjct: 341 EVHNLSERRRRDRINEKMKAL 361
Score = 74.3 bits (181), Expect(2) = e-100
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +3
Query: 1461 NEKMRALQELIPHCNKSDKASMLDEAIEYLKSLQLQVQMM 1580
NEKM+ALQELIPH NKSDKASMLDEAIEYLKSLQLQ+Q+M
Sbjct: 355 NEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
>ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 319 bits (817), Expect(2) = e-100
Identities = 186/381 (48%), Positives = 240/381 (62%), Gaps = 4/381 (1%)
Frame = +2
Query: 263 MNHSVR-NWNMEMNHLLPPQENQKRSMGLLDNNEFVELLWQNGQVVQHSQTHRKPGPAHN 439
MNH + +WN+E + P NQK+ MG +E VELLW+NGQVV HSQT RK G A N
Sbjct: 1 MNHPLLPDWNIEGD---VPVTNQKKPMG--QEHELVELLWRNGQVVLHSQTQRKSGLAPN 55
Query: 440 DSEPKKKYVHPM-KDGDSYMNLSTLIEEDETASWIQYPLEDSLDAEFCSNFLYELSNAHP 616
+S+ +K+ M ++G S N S LI+++E+ SWIQYPL+DSLD EFCSN EL P
Sbjct: 56 ESKQVQKHDQTMLRNGGSCGNWSNLIQDEESISWIQYPLDDSLDKEFCSNLFMELPPNDP 115
Query: 617 IEKEKTIKHFEGEKYVKFGASEETNVLTTSSTRPQQPLFRQPTNPIFVENSIPSSRPKVT 796
++ EK ++H E EK V QQP+F+ +P F N +P + +V
Sbjct: 116 VQPEKPVRHSEQEKSVPSS---------------QQPIFKHLGSPEFPGNPMPPPKFQVP 160
Query: 797 DATQKDLSLEGLDRVGNFPHFSRPLKAENGLSNGRIRGSGSG-LVSGGDFGESSVMTIGS 973
+ Q++ S G ++ NFP+FS P ++ G S ++ G GSG + GGD E SVMT+G
Sbjct: 161 GSVQQNCSSGGFGKIVNFPNFSFPGRSNLGSSKAQLGGKGSGNMAQGGDAKEGSVMTVGL 220
Query: 974 SHCGSNQLPNETDLSRVSSNGVGSTGMFQGPVKEDTRKVFPQSERGLTETLETNITXXXX 1153
SHCGSNQ+ NE DLSR SS+GVG+ + G VKE+ ++ Q +R TETLE +T
Sbjct: 221 SHCGSNQVVNEADLSRFSSSGVGTGCLSSGHVKENVMRIVSQGDRRQTETLEPTVTSSSG 280
Query: 1154 XXXXXFIG-TDRQSASIHSHKRKGRDADESEYHSEDAEFESANANKAPPRSGSIRRSRAA 1330
G T +QS +SHKRKGR+A+ESE SE AE ESA NKA RSGS RRSRAA
Sbjct: 281 GGSGSSFGRTYKQSTDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAA 340
Query: 1331 EVHNLSERRRRDRINEKMRAL 1393
EVHNLSERRRRDRINEKM+AL
Sbjct: 341 EVHNLSERRRRDRINEKMKAL 361
Score = 74.3 bits (181), Expect(2) = e-100
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +3
Query: 1461 NEKMRALQELIPHCNKSDKASMLDEAIEYLKSLQLQVQMM 1580
NEKM+ALQELIPH NKSDKASMLDEAIEYLKSLQLQ+Q+M
Sbjct: 355 NEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
>ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription
factor PIF5-like [Cucumis sativus]
Length = 550
Score = 268 bits (686), Expect(2) = 1e-85
Identities = 174/389 (44%), Positives = 230/389 (59%), Gaps = 12/389 (3%)
Frame = +2
Query: 263 MNHSVRNWNMEMNHLLPPQENQKRSMGLLDNNEFVELLWQNGQVVQHSQTHRKPGPAHND 442
MN+ +WN E + +PP K+SMG ++++ VELLW+NGQVV SQ RK N+
Sbjct: 1 MNYCFPDWNFEGD--IPPA---KKSMGP-EHDDLVELLWRNGQVVLQSQKARKSSLIANE 54
Query: 443 SEPKKKYVHPM-KDGDSYMNLSTLIEEDETASWIQYPLEDSLDAEFCSNFLYELSNAHPI 619
+K P+ + S N S LI++DET SWIQ PL+DS + EFCSNF EL A PI
Sbjct: 55 VRQFQKQNQPLYRSNVSCGNSSNLIQDDETVSWIQDPLDDSFEKEFCSNFFSELPPADPI 114
Query: 620 EKEKT-IKHFEGEKYVKFGASEETNVLT-----TSSTRPQQPLFRQPTNPIFVENSIPSS 781
E K IKHF+ +K +FGA + +T +++P L P N ++P
Sbjct: 115 EIVKQPIKHFQDDKQTRFGAFDTATHVTFGNFVKKNSKPPASLAEFPMN------TMPPP 168
Query: 782 RPKVTDATQKDLSLEGLDRVGNFPHFS-RPLKAENGLSNGRIRGSGSGLVSGGDFGESSV 958
R + D+++++ L L ++ NF PLK + G SNG G SG + G+ + S
Sbjct: 169 RFQFQDSSRQNKDLGDLGKLVNFSQVPVPPLKGDLGSSNG---GRESGNLIQGEGRDCSG 225
Query: 959 MTIGSSHCGSNQLPN--ETDLSRVSSNGVGSTGMFQGPVKEDTRKVFPQSERGLTETLET 1132
MT+GSSHCGSNQ+PN + DLSRVS++G G+ G+ G KED RK+ Q ER TET++
Sbjct: 226 MTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDP 285
Query: 1133 NITXXXXXXXXXF--IGTDRQSASIHSHKRKGRDADESEYHSEDAEFESANANKAPPRSG 1306
T T QS + +KRKGRD +ESE SE AE ESA NK PRSG
Sbjct: 286 TATSSSGGSGSSMDRSRTIGQSTGGNGNKRKGRDGEESECQSETAELESAEGNKTAPRSG 345
Query: 1307 SIRRSRAAEVHNLSERRRRDRINEKMRAL 1393
S RR+RAAEVHNLSERRRR+RINEKM+AL
Sbjct: 346 SSRRTRAAEVHNLSERRRRERINEKMKAL 374
Score = 76.6 bits (187), Expect(2) = 1e-85
Identities = 36/40 (90%), Positives = 40/40 (100%)
Frame = +3
Query: 1461 NEKMRALQELIPHCNKSDKASMLDEAIEYLKSLQLQVQMM 1580
NEKM+ALQELIPHCNK+DKASMLDEAIEYLKSLQLQ+Q+M
Sbjct: 368 NEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 407
>ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 246 bits (627), Expect(2) = 2e-75
Identities = 160/393 (40%), Positives = 219/393 (55%), Gaps = 16/393 (4%)
Frame = +2
Query: 263 MNHSVRNWNMEMNHLLPPQENQKRSMGLLDNNEFVELLWQNGQVVQHSQTHRKP-GPAHN 439
M +S+ + E + L NQ++ +G + E VELLWQNGQVV+H+QTHRKP G + N
Sbjct: 1 MKNSIPGLDFESDACLT---NQRKLIG--PDQELVELLWQNGQVVRHNQTHRKPLGNSSN 55
Query: 440 DSEPKKKYVHPMKDGDSYMNLSTLIEEDETASWIQYPLEDSLDAEFCSNFLYELSNAHPI 619
+ +K ++ Y N S L +++E WIQ+PLED L+ +FCSN L EL
Sbjct: 56 LRQAQKTDHSTLRSSGPYGNSSNL-DQEEATPWIQFPLEDPLEQDFCSNLLSELPPTCEF 114
Query: 620 EKEKTIKHFEGEKYVKFGASEETNVLTTSSTRPQQP------LFRQPTNPIFVENSIPSS 781
E K IK E +K+ F AS + TTSS++P P + R NP N +P+
Sbjct: 115 ESYKPIKQLEEDKFTNFFASSTPHHPTTSSSKPLPPNMTSSWVQRIQGNP----NPMPAP 170
Query: 782 RPKVTDATQKDLSLEGLDRVGNFPHFSRPL-KAENGLSNGRIRGSGSGLVSGGDFGESSV 958
R V D++QKD L +V NFPHFS P + + + R + +S + E SV
Sbjct: 171 RFHVPDSSQKDNDLGASRKVLNFPHFSTPRNNVSSAPGSTQFREKTTANLSQSEAREYSV 230
Query: 959 MTIGSSHCGSNQLPNETDLSRVSSNGVGSTGMFQGPVKED-------TRKVFPQSERGLT 1117
+T+GSSHCGS+ +P E D+SRVSS+ V +T E R + P+S++G +
Sbjct: 231 ITVGSSHCGSSHIPQEKDVSRVSSSAVWATNNNNSLSAEPEAVRDCVQRPICPRSDKGKS 290
Query: 1118 ETLETNITXXXXXXXXXFIG-TDRQSASIHSHKRKGRDADESEYHSEDAEFESANANKAP 1294
E +E +T IG T S H KRKG + + SE SE E +SA+ NKA
Sbjct: 291 EMIEPTVTSSSGGSGSTGIGRTCSLSTRDHGQKRKGTEEEASEEQSEATELKSADGNKAS 350
Query: 1295 PRSGSIRRSRAAEVHNLSERRRRDRINEKMRAL 1393
R+GS +R+RAAEVHN SERRRRDRINEKMR L
Sbjct: 351 QRTGSSKRNRAAEVHNQSERRRRDRINEKMRTL 383
Score = 65.5 bits (158), Expect(2) = 2e-75
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +3
Query: 1461 NEKMRALQELIPHCNKSDKASMLDEAIEYLKSLQLQVQMM 1580
NEKMR LQ+LIP+ NK+DKASML+EAIEYLKSLQ Q+Q+M
Sbjct: 377 NEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
>ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 237 bits (604), Expect(2) = 7e-73
Identities = 157/392 (40%), Positives = 216/392 (55%), Gaps = 15/392 (3%)
Frame = +2
Query: 263 MNHSVRNWNMEMNHLLPPQENQKRSMGLLDNNEFVELLWQNGQVVQHSQTHRKP-GPAHN 439
MN+S+ W+ E + L NQ++ +G + E VELLW+NGQVV H+QTHRK G + N
Sbjct: 1 MNNSIPGWDFESDTCLT---NQRKLIG--PDQELVELLWKNGQVVMHNQTHRKTLGNSSN 55
Query: 440 DSEPKKKYVHPMKDGDSYMNLSTLIEEDETASWIQYPLEDSLDAEFCSNFLYELSNAHPI 619
+ +K ++ Y N S L +ED A W+Q+PLED L+ +FCSN L EL
Sbjct: 56 LRQVQKSDQSVLRSSGPYGNSSNLDQED-AAPWVQFPLEDPLEQDFCSNLLSELPTCE-F 113
Query: 620 EKEKTIKHFEGEKYVKFGASEETNVLTTSSTRPQQPLFRQPTNPIFVENSIPSSRPKV-- 793
E K I+ E EK+ KF AS + TTSS++P P + N IP P+
Sbjct: 114 ESYKPIRQLEEEKFAKFFASGTPHHPTTSSSQPLPPNMKPSCIQGLQGNPIPMPAPRFHG 173
Query: 794 TDATQKDLSLEGLDRVGNFPHFSRP---LKAENGLSNGRIRGSGSGLVSGGDFGESSVMT 964
D++QK +V NFP FS P + + G++ R + + + +S + E SV+T
Sbjct: 174 PDSSQKIHDFGASRKVLNFPQFSTPRNNVPSAPGITQFREKTTAN--MSQSEAREYSVIT 231
Query: 965 IGSSHCGSNQLPNETDLSRVSSNGVGSTGMFQGPVKEDT--------RKVFPQSERGLTE 1120
+GSSHCGSN +P E D+SR+SS GV +T + + R + P+S +G +E
Sbjct: 232 VGSSHCGSNHIPQEQDVSRISSTGVWATTNNNTTLSAEPEAVRDYVQRPICPKSGQGKSE 291
Query: 1121 TLETNITXXXXXXXXXFIG-TDRQSASIHSHKRKGRDADESEYHSEDAEFESANANKAPP 1297
+E +T IG T S H KRKG + + E SED E +SA+ NKA
Sbjct: 292 MIELTVTSSSGGSGSTGIGRTCSLSTRDHGQKRKGTEEEALEEQSEDTELKSADGNKASQ 351
Query: 1298 RSGSIRRSRAAEVHNLSERRRRDRINEKMRAL 1393
R+ S RR+RAAEVHN SERRRRDRINEKMR L
Sbjct: 352 RTRSSRRNRAAEVHNQSERRRRDRINEKMRTL 383
Score = 65.5 bits (158), Expect(2) = 7e-73
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +3
Query: 1461 NEKMRALQELIPHCNKSDKASMLDEAIEYLKSLQLQVQMM 1580
NEKMR LQ+LIP+ NK+DKASML+EAIEYLKSLQ Q+Q+M
Sbjct: 377 NEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416