BLASTX nr result

ID: Coptis24_contig00003022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003022
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33863.1| unknown [Medicago truncatula]                          365   1e-98
ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycin...   365   1e-98
ref|XP_003624868.1| Proteasome subunit beta type [Medicago trunc...   365   1e-98
ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-...   364   2e-98
gb|AFK44934.1| unknown [Medicago truncatula]                          363   3e-98

>gb|AFK33863.1| unknown [Medicago truncatula]
          Length = 206

 Score =  365 bits (936), Expect = 1e-98
 Identities = 177/204 (86%), Positives = 191/204 (93%)
 Frame = -2

Query: 905 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTIATDFPKIYKIHDKLYIGLAGLLTDA 726
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF +I KIHDKL+IGL+GL TD+
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60

Query: 725 QTLYQRLVYNHKLYQLREERDMKPETFAHLVSHILYEKRFGPYFCQPVIAGIGDDDKPFI 546
           QTLYQRLV+ HKLYQLREERDMKPETFA LVS + YEKRFGPYFCQPVIAG+GDDDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 545 CTMDSIGALELAKDFVVAGTASESLYGACESMYKPDMEAEELFETVSQSLQASVDRDCLS 366
           CTMD+IGA ELAKDFVVAGTASESLYGACESM+KPDMEAEELFET+SQ+L +SVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 365 GWGGHVFVVTPTEATESTLKGRMD 294
           GWGGHV+VVTPTE  E  LKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204


>ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
           gi|255627485|gb|ACU14087.1| unknown [Glycine max]
          Length = 204

 Score =  365 bits (936), Expect = 1e-98
 Identities = 177/204 (86%), Positives = 191/204 (93%)
 Frame = -2

Query: 905 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTIATDFPKIYKIHDKLYIGLAGLLTDA 726
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF +I KIHDKL+IGL+GL TDA
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60

Query: 725 QTLYQRLVYNHKLYQLREERDMKPETFAHLVSHILYEKRFGPYFCQPVIAGIGDDDKPFI 546
           QTLYQRL++ HKLYQLREERDMKP+TFA LVS ILYEKRFGPYFCQPVIAG+GDDDKPFI
Sbjct: 61  QTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 545 CTMDSIGALELAKDFVVAGTASESLYGACESMYKPDMEAEELFETVSQSLQASVDRDCLS 366
           CTMD+IGA ELAKDFVVAGTASESLYGACESM+KPDME EELFET+SQ+L +SVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 365 GWGGHVFVVTPTEATESTLKGRMD 294
           GWGGHV+VVTPTE  E  LKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204


>ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355499883|gb|AES81086.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 204

 Score =  365 bits (936), Expect = 1e-98
 Identities = 177/204 (86%), Positives = 191/204 (93%)
 Frame = -2

Query: 905 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTIATDFPKIYKIHDKLYIGLAGLLTDA 726
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF +I KIHDKL+IGL+GL TD+
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60

Query: 725 QTLYQRLVYNHKLYQLREERDMKPETFAHLVSHILYEKRFGPYFCQPVIAGIGDDDKPFI 546
           QTLYQRLV+ HKLYQLREERDMKPETFA LVS + YEKRFGPYFCQPVIAG+GDDDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 545 CTMDSIGALELAKDFVVAGTASESLYGACESMYKPDMEAEELFETVSQSLQASVDRDCLS 366
           CTMD+IGA ELAKDFVVAGTASESLYGACESM+KPDMEAEELFET+SQ+L +SVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 365 GWGGHVFVVTPTEATESTLKGRMD 294
           GWGGHV+VVTPTE  E  LKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204


>ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
          Length = 204

 Score =  364 bits (934), Expect = 2e-98
 Identities = 176/204 (86%), Positives = 191/204 (93%)
 Frame = -2

Query: 905 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTIATDFPKIYKIHDKLYIGLAGLLTDA 726
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF KIY+IHDKL++GL+GL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 725 QTLYQRLVYNHKLYQLREERDMKPETFAHLVSHILYEKRFGPYFCQPVIAGIGDDDKPFI 546
           QTLYQRLV+ HKLYQLREERDMKPETFA LVS ILYEKRFGPYFCQPVIAG+ D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 545 CTMDSIGALELAKDFVVAGTASESLYGACESMYKPDMEAEELFETVSQSLQASVDRDCLS 366
           CTMDSIGA ELAKDFVV+GTASESLYGACE+M+KPDME EELFET+SQ+L +SVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 365 GWGGHVFVVTPTEATESTLKGRMD 294
           GWGGHV+VVTPTE  E  LKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204


>gb|AFK44934.1| unknown [Medicago truncatula]
          Length = 204

 Score =  363 bits (933), Expect = 3e-98
 Identities = 176/204 (86%), Positives = 191/204 (93%)
 Frame = -2

Query: 905 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTIATDFPKIYKIHDKLYIGLAGLLTDA 726
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF +I KIHDKL+IGL+GL TD+
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60

Query: 725 QTLYQRLVYNHKLYQLREERDMKPETFAHLVSHILYEKRFGPYFCQPVIAGIGDDDKPFI 546
           QTLYQRLV+ HKLYQLREERDM+PETFA LVS + YEKRFGPYFCQPVIAG+GDDDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 545 CTMDSIGALELAKDFVVAGTASESLYGACESMYKPDMEAEELFETVSQSLQASVDRDCLS 366
           CTMD+IGA ELAKDFVVAGTASESLYGACESM+KPDMEAEELFET+SQ+L +SVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 365 GWGGHVFVVTPTEATESTLKGRMD 294
           GWGGHV+VVTPTE  E  LKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204


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