BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003018
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36847.3| unnamed protein product [Vitis vinifera]              281   3e-73
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   281   3e-73
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   281   3e-73
gb|ABR18062.1| unknown [Picea sitchensis]                             275   3e-71
ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|2...   274   4e-71

>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  281 bits (719), Expect = 3e-73
 Identities = 137/184 (74%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
 Frame = +2

Query: 155 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPI---DLKIPPRPPGYAFVEFEDSRDAED 325
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI   DLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 326 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 505
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 506 SASWQDLKDHMRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRG 685
           SASWQDLKDHMRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR 
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180

Query: 686 YIRV 697
           Y+RV
Sbjct: 181 YVRV 184


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  281 bits (719), Expect = 3e-73
 Identities = 137/184 (74%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
 Frame = +2

Query: 155 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPI---DLKIPPRPPGYAFVEFEDSRDAED 325
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI   DLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 326 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 505
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 506 SASWQDLKDHMRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRG 685
           SASWQDLKDHMRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR 
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180

Query: 686 YIRV 697
           Y+RV
Sbjct: 181 YVRV 184


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  281 bits (719), Expect = 3e-73
 Identities = 137/184 (74%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
 Frame = +2

Query: 155 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPI---DLKIPPRPPGYAFVEFEDSRDAED 325
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI   DLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 326 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 505
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 506 SASWQDLKDHMRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRG 685
           SASWQDLKDHMRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR 
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180

Query: 686 YIRV 697
           Y+RV
Sbjct: 181 YVRV 184


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  275 bits (702), Expect = 3e-71
 Identities = 137/185 (74%), Positives = 148/185 (80%), Gaps = 4/185 (2%)
 Frame = +2

Query: 155 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPI---DLKIPPRPPGYAFVEFEDSRDAED 325
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI   DLKIPPRPPGY F+EFED+RDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60

Query: 326 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXX-VWVSGLP 502
           AIRGRDGY+FDG+RLRVELAHGGRGQ                           V VSGLP
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120

Query: 503 PSASWQDLKDHMRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSR 682
            SASWQDLKDHMRRAGDVCFSQV+ D  GTTG+VDYTNY+DM+YA+ KLDDSEFRNAFSR
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 180

Query: 683 GYIRV 697
           GYIRV
Sbjct: 181 GYIRV 185


>ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|222844436|gb|EEE81983.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  274 bits (701), Expect = 4e-71
 Identities = 135/184 (73%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
 Frame = +2

Query: 155 MSSKASRTLYVGNLPGDIREREVEDIFYKYGP---IDLKIPPRPPGYAFVEFEDSRDAED 325
           MSS+ASRTLYVGNLPGDIRE+EVED+FYKYGP   IDLKIPPRPPGYAFVEFE++RDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60

Query: 326 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 505
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVV-VTGLPS 119

Query: 506 SASWQDLKDHMRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRG 685
           SASWQDLKDHMRRAGDVCFSQV+ DG GTTG+VDYTNYEDM+YA+ K+DDSEFRNAFS+ 
Sbjct: 120 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQA 179

Query: 686 YIRV 697
           Y+RV
Sbjct: 180 YVRV 183