BLASTX nr result

ID: Coptis24_contig00003015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003015
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, ...   550   e-154
ref|XP_003528559.1| PREDICTED: erlin-2-B-like [Glycine max]           538   e-150
ref|XP_002267076.1| PREDICTED: erlin-2-B [Vitis vinifera] gi|297...   537   e-150
ref|XP_003556691.1| PREDICTED: erlin-2-like [Glycine max]             536   e-150
ref|XP_002316089.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149

>ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, putative [Ricinus
            communis] gi|223549266|gb|EEF50755.1| SPFH
            domain-containing protein 2 precursor, putative [Ricinus
            communis]
          Length = 365

 Score =  550 bits (1417), Expect = e-154
 Identities = 266/336 (79%), Positives = 305/336 (90%)
 Frame = +3

Query: 270  PPPGDLSSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGALLNTI 449
            PP GD S I  V +AF+ + +++++P++ + + +S SILHQVPEGHVGVYWRGGALL+TI
Sbjct: 21   PPSGDFSPILTVFLAFIGIISIIVIPSSANIK-NSLSILHQVPEGHVGVYWRGGALLDTI 79

Query: 450  TEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYVYETL 629
            T PGFH K+P +T +EP+QVTLQTDQV+DIPCGTKGGVMI+FEKIEVVNRL+K YVYETL
Sbjct: 80   TSPGFHLKMPLLTHYEPVQVTLQTDQVRDIPCGTKGGVMINFEKIEVVNRLRKEYVYETL 139

Query: 630  LNYGVEYDKTWIYDKIHHEINQFCSAQSLQQVYIDLFDQIDEKMKEALQGDCTRYAPGIE 809
            LNYGV+YD TWIYDKIHHEINQFCS+ SLQQVYID+FDQIDEKMK+ALQGDCTRYAPGIE
Sbjct: 140  LNYGVDYDNTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQGDCTRYAPGIE 199

Query: 810  IISVRVTKPTIPSSIRRNFEQMEEERTKALIAVERQKVAEKEAETQKKIALAEAEKHAQV 989
            IISVRVTKPTIP SIRRNFEQMEEERTK LIA+ERQKV EKEAET+KK+A++EAEK+A V
Sbjct: 200  IISVRVTKPTIPESIRRNFEQMEEERTKVLIAIERQKVVEKEAETKKKMAISEAEKNANV 259

Query: 990  SKILMEQKLMEKDSSRRQQEIENQMYTDREKSLADADFYRVLKEAEANKLKLTPEFLELK 1169
            SKILMEQKLMEKDS+RR+QEIENQMY   EKSLADA FYRV+KEAEANKLKLTPEFLELK
Sbjct: 260  SKILMEQKLMEKDSARREQEIENQMYMSHEKSLADAAFYRVMKEAEANKLKLTPEFLELK 319

Query: 1170 FIESISNNSKIFFGDKVPNMVFDQRLLGNFLNPAGR 1277
            FIE+I++N+KIFFGDKVPNMV DQRLLGNFL+   R
Sbjct: 320  FIEAIADNTKIFFGDKVPNMVLDQRLLGNFLHGVSR 355


>ref|XP_003528559.1| PREDICTED: erlin-2-B-like [Glycine max]
          Length = 364

 Score =  538 bits (1386), Expect = e-150
 Identities = 263/341 (77%), Positives = 301/341 (88%), Gaps = 4/341 (1%)
 Frame = +3

Query: 270  PPPG----DLSSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGAL 437
            PPP     D +SI    ++F A+ A+VL+P+   +  +S SILHQVPEGHVGVYWRGGAL
Sbjct: 15   PPPARQSHDSTSILFTFLSFFAIVALVLLPSASPSFQNSLSILHQVPEGHVGVYWRGGAL 74

Query: 438  LNTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYV 617
            L TITEPGFH K+PFITQ+EP+QVTLQTD V DIPCGTKGGVMISF KIEVVN+L K +V
Sbjct: 75   LKTITEPGFHLKMPFITQYEPVQVTLQTDMVIDIPCGTKGGVMISFGKIEVVNQLHKEFV 134

Query: 618  YETLLNYGVEYDKTWIYDKIHHEINQFCSAQSLQQVYIDLFDQIDEKMKEALQGDCTRYA 797
            +ETLLNYGV YDKTWIYDKIHHEINQFCS+ SLQQVYID+FDQIDEKMK+ALQ DCTRYA
Sbjct: 135  FETLLNYGVHYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYA 194

Query: 798  PGIEIISVRVTKPTIPSSIRRNFEQMEEERTKALIAVERQKVAEKEAETQKKIALAEAEK 977
            PGIEI+SVRVTKPTIP SIRRNFEQMEEERTK LIA+E+QKV+EKEAET KK+A++EAEK
Sbjct: 195  PGIEILSVRVTKPTIPESIRRNFEQMEEERTKVLIAIEKQKVSEKEAETMKKMAISEAEK 254

Query: 978  HAQVSKILMEQKLMEKDSSRRQQEIENQMYTDREKSLADADFYRVLKEAEANKLKLTPEF 1157
            +A VSKILMEQKL+EKDS+RRQ+EIEN MY  REKSLADADFYRV+KEAEAN+LKLTPEF
Sbjct: 255  NANVSKILMEQKLLEKDSARRQEEIENAMYLAREKSLADADFYRVIKEAEANRLKLTPEF 314

Query: 1158 LELKFIESISNNSKIFFGDKVPNMVFDQRLLGNFLNPAGRG 1280
            L+LKFI++I+NN+KIFFGDKVPNM+ DQRLLGN L+   RG
Sbjct: 315  LQLKFIQAIANNTKIFFGDKVPNMILDQRLLGNLLHDVSRG 355


>ref|XP_002267076.1| PREDICTED: erlin-2-B [Vitis vinifera] gi|297738083|emb|CBI27284.3|
            unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  537 bits (1383), Expect = e-150
 Identities = 269/351 (76%), Positives = 307/351 (87%), Gaps = 12/351 (3%)
 Frame = +3

Query: 267  TPPP-----------GDLSSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVG 413
            TPPP           GD S+I  VL  F+ + + V   ++ S   ++ ++LHQVPEGHVG
Sbjct: 25   TPPPRPRPAPAAAAGGDFSAIITVLFFFILIFSFVAFQSS-STLTNNLTLLHQVPEGHVG 83

Query: 414  VYWRGGALLNTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVV 593
            +YWRGGALL TITEPGFH K+P +TQFEPIQVTLQTDQV+DIPCGTKGGVMI+FEKIEVV
Sbjct: 84   MYWRGGALLKTITEPGFHLKMPLVTQFEPIQVTLQTDQVRDIPCGTKGGVMINFEKIEVV 143

Query: 594  NRLKKNYVYETLLNYGVEYDKTWIYDKIHHEINQFCSAQSLQQVYIDLFDQIDEKMKEAL 773
            NRL K+YVYETLLNYGV+YD TWIYDKIHHEINQFCSA SLQQVYID+FDQIDEKMK+AL
Sbjct: 144  NRLHKDYVYETLLNYGVQYDNTWIYDKIHHEINQFCSAHSLQQVYIDMFDQIDEKMKDAL 203

Query: 774  QGDCTRYAPGIEIISVRVTKPTIPSSIRRNFEQMEEERTKALIAVERQKVAEKEAETQKK 953
            QGDCTRYAPGIEIISVRVTKP+IP SIRRNFEQME+ERT  LIA+E+QKVAEKEAET+KK
Sbjct: 204  QGDCTRYAPGIEIISVRVTKPSIPESIRRNFEQMEQERTNVLIAMEKQKVAEKEAETRKK 263

Query: 954  IALAEAEKHAQVSKILMEQKLMEKDSSRRQQEIENQMYTDREKSLADADFYRVLKEAEAN 1133
            +A+ EAEK+AQVSKILM+QKLMEKDSSR Q+EIENQMY  REKSLADA FYR++KEAEAN
Sbjct: 264  MAITEAEKNAQVSKILMQQKLMEKDSSRMQEEIENQMYMAREKSLADASFYRLMKEAEAN 323

Query: 1134 KLKLTPEFLELKFIESISNNSKIFFGDKVPNMVFDQRLLGNFL-NPAGRGE 1283
            KLKLTPE+LEL+FIE+I+NNSKIFFG+KVPNMVFDQRLLGNFL + A RG+
Sbjct: 324  KLKLTPEYLELRFIEAIANNSKIFFGNKVPNMVFDQRLLGNFLQSVAKRGD 374


>ref|XP_003556691.1| PREDICTED: erlin-2-like [Glycine max]
          Length = 361

 Score =  536 bits (1382), Expect = e-150
 Identities = 260/333 (78%), Positives = 298/333 (89%)
 Frame = +3

Query: 282  DLSSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGALLNTITEPG 461
            D ++I   L++F A+ A+VL+P+      +S SILHQVPEGHVGVYWRGGALL TITEPG
Sbjct: 20   DSTAILFTLLSFFAIVALVLLPSASPFFQNSLSILHQVPEGHVGVYWRGGALLKTITEPG 79

Query: 462  FHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYVYETLLNYG 641
            FH K+PF+TQ+EP+QVTLQTD V DIPCGTKGGVMISF KIEVVNRL+K +V+ETLLNYG
Sbjct: 80   FHLKMPFLTQYEPVQVTLQTDMVTDIPCGTKGGVMISFGKIEVVNRLRKEFVFETLLNYG 139

Query: 642  VEYDKTWIYDKIHHEINQFCSAQSLQQVYIDLFDQIDEKMKEALQGDCTRYAPGIEIISV 821
            V YDKTWIYDKIHHEINQFCS+ SLQQVYID+FDQIDEKMK+ALQ DCTRYAPGIEI+SV
Sbjct: 140  VHYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEILSV 199

Query: 822  RVTKPTIPSSIRRNFEQMEEERTKALIAVERQKVAEKEAETQKKIALAEAEKHAQVSKIL 1001
            RVTKPTIP SIRRNFEQMEEERTK LIA+E+QKVAEKEAET KK+A++EAEK+A VSKIL
Sbjct: 200  RVTKPTIPESIRRNFEQMEEERTKVLIAIEKQKVAEKEAETMKKMAISEAEKNANVSKIL 259

Query: 1002 MEQKLMEKDSSRRQQEIENQMYTDREKSLADADFYRVLKEAEANKLKLTPEFLELKFIES 1181
            MEQKL+EKDS+RRQ+EIEN MY  REKSLADADFYRV+KEAEAN+LKLTPEFL+LKFI++
Sbjct: 260  MEQKLLEKDSARRQEEIENAMYLAREKSLADADFYRVIKEAEANRLKLTPEFLQLKFIQA 319

Query: 1182 ISNNSKIFFGDKVPNMVFDQRLLGNFLNPAGRG 1280
            I+NN+KIFFGDKVPNM+ DQRLLGN L+    G
Sbjct: 320  IANNTKIFFGDKVPNMILDQRLLGNLLHDVSSG 352


>ref|XP_002316089.1| predicted protein [Populus trichocarpa] gi|222865129|gb|EEF02260.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  535 bits (1378), Expect = e-149
 Identities = 266/333 (79%), Positives = 296/333 (88%), Gaps = 2/333 (0%)
 Frame = +3

Query: 270  PPP--GDLSSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGALLN 443
            PPP  GD S I  V ++F+A+ A+V+      A     SILHQVPEGHVGVYWRGGALL 
Sbjct: 15   PPPQTGDFSPILTVFLSFIAIFALVV------ALSPVLSILHQVPEGHVGVYWRGGALLQ 68

Query: 444  TITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYVYE 623
            T+T+PGFH KLP ITQ+EP+QVTLQTDQV+DIPCGTKGGVMI+FEKIEVVNRL K YVYE
Sbjct: 69   TVTDPGFHLKLPLITQYEPVQVTLQTDQVRDIPCGTKGGVMINFEKIEVVNRLGKEYVYE 128

Query: 624  TLLNYGVEYDKTWIYDKIHHEINQFCSAQSLQQVYIDLFDQIDEKMKEALQGDCTRYAPG 803
            TLLNYGV+YD TWIYDKIHHEINQFCS+ SLQQVYID+FDQIDEKMK+ALQGDCTRYAPG
Sbjct: 129  TLLNYGVQYDHTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQGDCTRYAPG 188

Query: 804  IEIISVRVTKPTIPSSIRRNFEQMEEERTKALIAVERQKVAEKEAETQKKIALAEAEKHA 983
            IEIISVRVTKPTIP SIR+NFEQMEEERTK LI++ERQK  EKEAET KK+A++EAEK+A
Sbjct: 189  IEIISVRVTKPTIPESIRKNFEQMEEERTKVLISIERQKFVEKEAETTKKMAISEAEKNA 248

Query: 984  QVSKILMEQKLMEKDSSRRQQEIENQMYTDREKSLADADFYRVLKEAEANKLKLTPEFLE 1163
             VSKILMEQKLMEKDS+RR+QEIENQMY   EKSLADA FYRVLKEAEANKLKLTP+FLE
Sbjct: 249  NVSKILMEQKLMEKDSARREQEIENQMYMAHEKSLADAAFYRVLKEAEANKLKLTPQFLE 308

Query: 1164 LKFIESISNNSKIFFGDKVPNMVFDQRLLGNFL 1262
            LKFIE+I++N+KIFFGDKVPNMV DQRLLGNFL
Sbjct: 309  LKFIEAIADNTKIFFGDKVPNMVLDQRLLGNFL 341


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