BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003007
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18131.3| unnamed protein product [Vitis vinifera]              245   2e-62
ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265...   245   2e-62
ref|XP_002273049.2| PREDICTED: uncharacterized protein LOC100263...   228   3e-57
emb|CBI25446.3| unnamed protein product [Vitis vinifera]              216   7e-54
ref|XP_002528326.1| DNA binding protein, putative [Ricinus commu...   187   5e-45

>emb|CBI18131.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  245 bits (625), Expect = 2e-62
 Identities = 153/323 (47%), Positives = 189/323 (58%), Gaps = 8/323 (2%)
 Frame = +3

Query: 156  KASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQMMNIKGLSIAHV 335
            K  S  VRPYVRSKMPRLRWTPDLH  FV+AVERLGGQ+RATPKLVLQ+MNIKGL+IAHV
Sbjct: 83   KGHSGAVRPYVRSKMPRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNIKGLNIAHV 142

Query: 336  KSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRPSPDFRYDVXXX 515
            KSHLQMYRSKKI+D GQV+ D  HL+E  D +IYN SQLPMLQG NQRP+  FRY     
Sbjct: 143  KSHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQRPTSSFRYGDASW 202

Query: 516  XXXXXXXXXPYVGGGLDDRGKRTAGFYGLIAERISSGITNN---LNYHKGNFDTSEQTRN 686
                     P++G    D+  R  GFYG + ERI  G  NN    N+H G    +E +  
Sbjct: 203  SAHENWMHSPFIGRSSVDKTTR-PGFYGSVTERIFGGNNNNSTSCNFHMGT-SLNEYSTW 260

Query: 687  RSYGSNDRYQLR-SDLRSWRTRISAGKIEPDFITQFQARGREPAVNL-LQNTSIHETGQR 860
             ++   D +Q    D  SWR +  +   E + +TQ QA  RE   ++ L++    +    
Sbjct: 261  GTHVRKDSFQTSFHDHESWRGQAGSSLKELNQLTQMQAHVRERREHMSLKSRIPSDMNTA 320

Query: 861  TPMEDKNKLKRKAXXXXXXXXXXXKITSRQDVCQRDLDD-EVD-XXXXXXXXXXXXXKRN 1034
            T +++   +KRKA           K+T R D   R L+D EVD              K +
Sbjct: 321  TNLQEWRTVKRKASDCDLDLNLSLKLTPRNDETARGLEDNEVDSCNLSLSLYSPSSSKLS 380

Query: 1035 RLKE-RDDYREHAKMTSTLDLTL 1100
            RLKE RDD  EHA   STLDLT+
Sbjct: 381  RLKEGRDDSMEHATRASTLDLTI 403


>ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265991 [Vitis vinifera]
            gi|147820277|emb|CAN73581.1| hypothetical protein
            VITISV_002087 [Vitis vinifera]
          Length = 370

 Score =  245 bits (625), Expect = 2e-62
 Identities = 153/323 (47%), Positives = 189/323 (58%), Gaps = 8/323 (2%)
 Frame = +3

Query: 156  KASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQMMNIKGLSIAHV 335
            K  S  VRPYVRSKMPRLRWTPDLH  FV+AVERLGGQ+RATPKLVLQ+MNIKGL+IAHV
Sbjct: 50   KGHSGAVRPYVRSKMPRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMNIKGLNIAHV 109

Query: 336  KSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRPSPDFRYDVXXX 515
            KSHLQMYRSKKI+D GQV+ D  HL+E  D +IYN SQLPMLQG NQRP+  FRY     
Sbjct: 110  KSHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQRPTSSFRYGDASW 169

Query: 516  XXXXXXXXXPYVGGGLDDRGKRTAGFYGLIAERISSGITNN---LNYHKGNFDTSEQTRN 686
                     P++G    D+  R  GFYG + ERI  G  NN    N+H G    +E +  
Sbjct: 170  SAHENWMHSPFIGRSSVDKTTR-PGFYGSVTERIFGGNNNNSTSCNFHMGT-SLNEYSTW 227

Query: 687  RSYGSNDRYQLR-SDLRSWRTRISAGKIEPDFITQFQARGREPAVNL-LQNTSIHETGQR 860
             ++   D +Q    D  SWR +  +   E + +TQ QA  RE   ++ L++    +    
Sbjct: 228  GTHVRKDSFQTSFHDHESWRGQAGSSLKELNQLTQMQAHVRERREHMSLKSRIPSDMNTA 287

Query: 861  TPMEDKNKLKRKAXXXXXXXXXXXKITSRQDVCQRDLDD-EVD-XXXXXXXXXXXXXKRN 1034
            T +++   +KRKA           K+T R D   R L+D EVD              K +
Sbjct: 288  TNLQEWRTVKRKASDCDLDLNLSLKLTPRNDETARGLEDNEVDSCNLSLSLYSPSSSKLS 347

Query: 1035 RLKE-RDDYREHAKMTSTLDLTL 1100
            RLKE RDD  EHA   STLDLT+
Sbjct: 348  RLKEGRDDSMEHATRASTLDLTI 370


>ref|XP_002273049.2| PREDICTED: uncharacterized protein LOC100263821 [Vitis vinifera]
          Length = 376

 Score =  228 bits (580), Expect = 3e-57
 Identities = 147/329 (44%), Positives = 187/329 (56%), Gaps = 14/329 (4%)
 Frame = +3

Query: 156  KASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQMMNIKGLSIAHV 335
            KA S  VR YVRSKMPRLRWTPDLH CF++AVERLGGQDRATPKLVLQ+M+IKGLSI+HV
Sbjct: 56   KAGSGSVRRYVRSKMPRLRWTPDLHLCFLHAVERLGGQDRATPKLVLQLMDIKGLSISHV 115

Query: 336  KSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP-SPDFRYD--- 503
            KSHLQMYRSKKIDD  QV+ +QG  +EG D+HIY  S LPMLQ FN+RP +  FRYD   
Sbjct: 116  KSHLQMYRSKKIDDPNQVMMEQGLFIEGGDHHIYKLSHLPMLQSFNRRPDTSGFRYDSAS 175

Query: 504  VXXXXXXXXXXXXPYVGGGLDDRGKRTAGFYGLIAERI--SSGITNNLNY--HKGNFDTS 671
                         PY GG   DR K   G Y  ++ERI  S+  ++ LNY  H GN   +
Sbjct: 176  ASWRASMANQTYSPYRGGDASDRSKN--GGYSSVSERIFRSNKGSSVLNYEFHVGNSSFN 233

Query: 672  EQ-TRNRSYGSNDRYQLRSDLR-SWRTRISAGKIEPDFITQFQARGREPAVNLLQNTSIH 845
             Q T N ++ + + +QL S    SWR++I    I+ +++       R+  VN L N    
Sbjct: 234  GQATWNNAHHTREEFQLYSQSHGSWRSQIRPSSIQSNYLQPQVLESRKQQVNRLNNPPPP 293

Query: 846  ETGQRTPMEDKNKLKRKAXXXXXXXXXXXKI----TSRQDVCQRDLDDEVDXXXXXXXXX 1013
            +  Q+T       LKRK+            +     S     ++    E+D         
Sbjct: 294  QENQKT------MLKRKSSDSNFDLDLNLSLKPAPKSHDHHLEKMDSTEIDSSLSLSLFS 347

Query: 1014 XXXXKRNRLKERDDYREHAKMTSTLDLTL 1100
                K +R+KE D  R+HA+  STLDLTL
Sbjct: 348  PPPSKLSRVKEGDGSRKHAEGASTLDLTL 376


>emb|CBI25446.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  216 bits (551), Expect = 7e-54
 Identities = 140/320 (43%), Positives = 180/320 (56%), Gaps = 14/320 (4%)
 Frame = +3

Query: 156  KASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQMMNIKGLSIAHV 335
            KA S  VR YVRSKMPRLRWTPDLH CF++AVERLGGQDRATPKLVLQ+M+IKGLSI+HV
Sbjct: 149  KAGSGSVRRYVRSKMPRLRWTPDLHLCFLHAVERLGGQDRATPKLVLQLMDIKGLSISHV 208

Query: 336  KSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP-SPDFRYD--- 503
            KSHLQMYRSKKIDD  QV+ +QG  +EG D+HIY  S LPMLQ FN+RP +  FRYD   
Sbjct: 209  KSHLQMYRSKKIDDPNQVMMEQGLFIEGGDHHIYKLSHLPMLQSFNRRPDTSGFRYDSAS 268

Query: 504  VXXXXXXXXXXXXPYVGGGLDDRGKRTAGFYGLIAERI--SSGITNNLNY--HKGNFDTS 671
                         PY GG   DR K   G Y  ++ERI  S+  ++ LNY  H GN   +
Sbjct: 269  ASWRASMANQTYSPYRGGDASDRSKN--GGYSSVSERIFRSNKGSSVLNYEFHVGNSSFN 326

Query: 672  EQ-TRNRSYGSNDRYQLRSDLR-SWRTRISAGKIEPDFITQFQARGREPAVNLLQNTSIH 845
             Q T N ++ + + +QL S    SWR++I    I+ +++       R+  VN L N    
Sbjct: 327  GQATWNNAHHTREEFQLYSQSHGSWRSQIRPSSIQSNYLQPQVLESRKQQVNRLNNPPPP 386

Query: 846  ETGQRTPMEDKNKLKRKAXXXXXXXXXXXKI----TSRQDVCQRDLDDEVDXXXXXXXXX 1013
            +  Q+T       LKRK+            +     S     ++    E+D         
Sbjct: 387  QENQKT------MLKRKSSDSNFDLDLNLSLKPAPKSHDHHLEKMDSTEIDSSLSLSLFS 440

Query: 1014 XXXXKRNRLKERDDYREHAK 1073
                K +R+KE D  R+HA+
Sbjct: 441  PPPSKLSRVKEGDGSRKHAE 460


>ref|XP_002528326.1| DNA binding protein, putative [Ricinus communis]
            gi|223532281|gb|EEF34084.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 375

 Score =  187 bits (475), Expect = 5e-45
 Identities = 134/333 (40%), Positives = 170/333 (51%), Gaps = 20/333 (6%)
 Frame = +3

Query: 162  SSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQMMNIKGLSIAHVKS 341
            ++  VR Y RSKMPRLRWTPDLH CFV+AVERLGG++RATPKLVLQMMNIKGLSIAHVKS
Sbjct: 61   ATRSVRQYNRSKMPRLRWTPDLHLCFVHAVERLGGEERATPKLVLQMMNIKGLSIAHVKS 120

Query: 342  HLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRPSPDFRYDVXXXXX 521
            HLQMYRSKKIDDA +   +QG + EG D +I+N  Q+PMLQ FNQ P  +FRY       
Sbjct: 121  HLQMYRSKKIDDATR---EQGLISEGGDRNIFNLGQIPMLQTFNQEPFANFRY------- 170

Query: 522  XXXXXXXPYVGGGLDDRGKRTAGFYGLIAERISSGITNNLNYHKGNFDTSEQTRNRSYGS 701
                    ++GG +  RGK+  G  G  ++R   G   N N    N +      N    +
Sbjct: 171  -GDASRRSFMGGAVIHRGKQ--GINGSESDRF-LGCNKNQNSLTYNSNVCFPFLNEQI-N 225

Query: 702  NDRYQLRSDLRSWRTRISAGKIEPD-FITQFQARGREPAVNLLQNTSIHETGQRTPMEDK 878
                + +S  RSWR       ++ + FIT+ Q R      + + N S      +T  E +
Sbjct: 226  QSLEEFKSFHRSWRIESKPNSMDSNLFITKLQERRGIDQADCISNNSSINKNLKTIQETR 285

Query: 879  NKLKRKAXXXXXXXXXXXKITSRQDVCQRDLDDEVD-----------------XXXXXXX 1007
            N LKRK             +     V  +D DD+ D                        
Sbjct: 286  NGLKRKT---SLDADCNLDLNLSLKVTVKDHDDDNDGVLDHEMGVESEELVYCSTLSLSL 342

Query: 1008 XXXXXXKRNRLKERDDYR--EHAKMTSTLDLTL 1100
                  K + LKE D  R  + A+ TSTLDLTL
Sbjct: 343  SSSSSSKLSGLKEEDGRRKIKEARRTSTLDLTL 375