BLASTX nr result

ID: Coptis24_contig00003006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003006
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275927.2| PREDICTED: uncharacterized protein LOC100264...   409   e-112
emb|CBI24755.3| unnamed protein product [Vitis vinifera]              409   e-112
ref|XP_002310382.1| predicted protein [Populus trichocarpa] gi|2...   389   e-105
gb|ABK94738.1| unknown [Populus trichocarpa]                          389   e-105
sp|Q4LDF9.1|OEP37_PEA RecName: Full=Outer envelope pore protein ...   387   e-105

>ref|XP_002275927.2| PREDICTED: uncharacterized protein LOC100264576 [Vitis vinifera]
          Length = 328

 Score =  409 bits (1052), Expect = e-112
 Identities = 201/319 (63%), Positives = 237/319 (74%)
 Frame = +3

Query: 63   PTTNLDTPQNPTLKQTTSTNFFSLPSRPPVRLTSEYDSDSNLFFNKISCKFFDNIGKLKL 242
            P+ N   P  P  +  +    +  P RP +RLTSE+DSDS++FF+KISCK FD++ KLKL
Sbjct: 13   PSPNSLVPPTPAAESPSPQGPWLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKL 72

Query: 243  SFQNNKNGEISDPQLGFITKHLSLFYDVEEQNAFVKGCFGIGDNLTFRAAQDVKAQEGEV 422
            SFQNN +GEI DPQLGFI+KHLSL YD++  NAF+KGCF +G  L F AA DVKAQ+GEV
Sbjct: 73   SFQNNNDGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEV 132

Query: 423  AMVASLPNPLYKLELSSTVPSIGLPKATVRFPLGXXXXXXXXXXXXXXXXXXXXXXGIVK 602
            AMVA L  P YK ELSS VP+IG PKAT++FP G                      GI++
Sbjct: 133  AMVADLAGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSIN---GILQ 189

Query: 603  GQVLNGLCTALYKDEALNLRYSYKDNDMAFIPSISLPSNLFSFAFKRRFSISDKLSYWYN 782
             Q+LNG+ +A ++D+ L LRY YKD  +AFIPSIS+PSN  SFAFKRRFS SDKLSYWYN
Sbjct: 190  HQILNGVFSAQFRDDDLKLRYLYKDEQVAFIPSISMPSNAISFAFKRRFSPSDKLSYWYN 249

Query: 783  CDSNNWSTVYKHTVSNDLKFKAGYDSEVRLGWASLWVGDEAGKAKSAPMKMKIQFMVQVP 962
             DSN WSTVYKHTV  D KFK GYDSEVRLGWASLWVGDE G AKS PMK+K+QFM+QVP
Sbjct: 250  LDSNYWSTVYKHTVGKDYKFKVGYDSEVRLGWASLWVGDEGGNAKSTPMKLKVQFMLQVP 309

Query: 963  QDDIKSSAVMFRVKKRWDL 1019
            QDDI SSA+MFRVKKRWD+
Sbjct: 310  QDDIHSSALMFRVKKRWDI 328


>emb|CBI24755.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  409 bits (1052), Expect = e-112
 Identities = 201/319 (63%), Positives = 237/319 (74%)
 Frame = +3

Query: 63   PTTNLDTPQNPTLKQTTSTNFFSLPSRPPVRLTSEYDSDSNLFFNKISCKFFDNIGKLKL 242
            P+ N   P  P  +  +    +  P RP +RLTSE+DSDS++FF+KISCK FD++ KLKL
Sbjct: 10   PSPNSLVPPTPAAESPSPQGPWLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKL 69

Query: 243  SFQNNKNGEISDPQLGFITKHLSLFYDVEEQNAFVKGCFGIGDNLTFRAAQDVKAQEGEV 422
            SFQNN +GEI DPQLGFI+KHLSL YD++  NAF+KGCF +G  L F AA DVKAQ+GEV
Sbjct: 70   SFQNNNDGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEV 129

Query: 423  AMVASLPNPLYKLELSSTVPSIGLPKATVRFPLGXXXXXXXXXXXXXXXXXXXXXXGIVK 602
            AMVA L  P YK ELSS VP+IG PKAT++FP G                      GI++
Sbjct: 130  AMVADLAGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSIN---GILQ 186

Query: 603  GQVLNGLCTALYKDEALNLRYSYKDNDMAFIPSISLPSNLFSFAFKRRFSISDKLSYWYN 782
             Q+LNG+ +A ++D+ L LRY YKD  +AFIPSIS+PSN  SFAFKRRFS SDKLSYWYN
Sbjct: 187  HQILNGVFSAQFRDDDLKLRYLYKDEQVAFIPSISMPSNAISFAFKRRFSPSDKLSYWYN 246

Query: 783  CDSNNWSTVYKHTVSNDLKFKAGYDSEVRLGWASLWVGDEAGKAKSAPMKMKIQFMVQVP 962
             DSN WSTVYKHTV  D KFK GYDSEVRLGWASLWVGDE G AKS PMK+K+QFM+QVP
Sbjct: 247  LDSNYWSTVYKHTVGKDYKFKVGYDSEVRLGWASLWVGDEGGNAKSTPMKLKVQFMLQVP 306

Query: 963  QDDIKSSAVMFRVKKRWDL 1019
            QDDI SSA+MFRVKKRWD+
Sbjct: 307  QDDIHSSALMFRVKKRWDI 325


>ref|XP_002310382.1| predicted protein [Populus trichocarpa] gi|222853285|gb|EEE90832.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  389 bits (998), Expect = e-105
 Identities = 193/319 (60%), Positives = 232/319 (72%)
 Frame = +3

Query: 63   PTTNLDTPQNPTLKQTTSTNFFSLPSRPPVRLTSEYDSDSNLFFNKISCKFFDNIGKLKL 242
            P  + D P  P      S     L  RP +R+TSE+DSDS+LFF+K+SCK  D+  K KL
Sbjct: 4    PIPHTDPPPPPP-PPPRSCKTCLLSKRPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKL 62

Query: 243  SFQNNKNGEISDPQLGFITKHLSLFYDVEEQNAFVKGCFGIGDNLTFRAAQDVKAQEGEV 422
            SFQNN  GE+S PQ  F +K LS+ YD+EE NA VKG F +G NL F+AA DVKAQ+GEV
Sbjct: 63   SFQNNNKGELSQPQFAFTSKLLSIHYDLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEV 122

Query: 423  AMVASLPNPLYKLELSSTVPSIGLPKATVRFPLGXXXXXXXXXXXXXXXXXXXXXXGIVK 602
            AMVA L +P Y LE+SS VP++G+P+AT++FPLG                      G+VK
Sbjct: 123  AMVADLGDPGYALEISSPVPTVGVPRATLKFPLGEVSLEEKEEEELRRTLSVS---GVVK 179

Query: 603  GQVLNGLCTALYKDEALNLRYSYKDNDMAFIPSISLPSNLFSFAFKRRFSISDKLSYWYN 782
             Q++NGLCTA + DE L L+Y YKD  ++ IPSISLPSN  SFAFKRRF+ S+KLSYWYN
Sbjct: 180  SQLMNGLCTAQFSDEDLKLKYCYKDEALSIIPSISLPSNALSFAFKRRFTPSNKLSYWYN 239

Query: 783  CDSNNWSTVYKHTVSNDLKFKAGYDSEVRLGWASLWVGDEAGKAKSAPMKMKIQFMVQVP 962
             D+NNWSTVYKHT   D K KAGYDSEVRLGWASLWVGDE G AK+APMKMK+QFM+QVP
Sbjct: 240  FDTNNWSTVYKHTYGKDFKLKAGYDSEVRLGWASLWVGDEGGNAKTAPMKMKVQFMLQVP 299

Query: 963  QDDIKSSAVMFRVKKRWDL 1019
            QDDIK+SA+MFRVKKRWD+
Sbjct: 300  QDDIKTSALMFRVKKRWDI 318


>gb|ABK94738.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  389 bits (998), Expect = e-105
 Identities = 193/319 (60%), Positives = 232/319 (72%)
 Frame = +3

Query: 63   PTTNLDTPQNPTLKQTTSTNFFSLPSRPPVRLTSEYDSDSNLFFNKISCKFFDNIGKLKL 242
            P  + D P  P      S     L  RP +R+TSE+DSDS+LFF+K+SCK  D+  K KL
Sbjct: 20   PIPHTDPPPPPP-PPPRSCKTCLLSKRPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKL 78

Query: 243  SFQNNKNGEISDPQLGFITKHLSLFYDVEEQNAFVKGCFGIGDNLTFRAAQDVKAQEGEV 422
            SFQNN  GE+S PQ  F +K LS+ YD+EE NA VKG F +G NL F+AA DVKAQ+GEV
Sbjct: 79   SFQNNNKGELSQPQFAFTSKLLSIHYDLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEV 138

Query: 423  AMVASLPNPLYKLELSSTVPSIGLPKATVRFPLGXXXXXXXXXXXXXXXXXXXXXXGIVK 602
            AMVA L +P Y LE+SS VP++G+P+AT++FPLG                      G+VK
Sbjct: 139  AMVADLGDPGYALEISSPVPTVGVPRATLKFPLGEVSLEEKEEEELRRTLSVS---GVVK 195

Query: 603  GQVLNGLCTALYKDEALNLRYSYKDNDMAFIPSISLPSNLFSFAFKRRFSISDKLSYWYN 782
             Q++NGLCTA + DE L L+Y YKD  ++ IPSISLPSN  SFAFKRRF+ S+KLSYWYN
Sbjct: 196  SQLMNGLCTAQFSDEDLKLKYCYKDEALSIIPSISLPSNALSFAFKRRFTPSNKLSYWYN 255

Query: 783  CDSNNWSTVYKHTVSNDLKFKAGYDSEVRLGWASLWVGDEAGKAKSAPMKMKIQFMVQVP 962
             D+NNWSTVYKHT   D K KAGYDSEVRLGWASLWVGDE G AK+APMKMK+QFM+QVP
Sbjct: 256  FDTNNWSTVYKHTYGKDFKLKAGYDSEVRLGWASLWVGDEGGNAKTAPMKMKVQFMLQVP 315

Query: 963  QDDIKSSAVMFRVKKRWDL 1019
            QDDIK+SA+MFRVKKRWD+
Sbjct: 316  QDDIKTSALMFRVKKRWDI 334


>sp|Q4LDF9.1|OEP37_PEA RecName: Full=Outer envelope pore protein 37, chloroplastic; AltName:
            Full=Chloroplastic outer envelope pore protein of 37 kDa;
            Short=PsOEP37; Flags: Precursor
            gi|5531418|emb|CAB50915.1| outer envelope protein [Pisum
            sativum]
          Length = 329

 Score =  387 bits (994), Expect = e-105
 Identities = 189/327 (57%), Positives = 234/327 (71%), Gaps = 3/327 (0%)
 Frame = +3

Query: 48   SSTQNP--TTNLDTPQNPTLKQTTSTNFFSLPSRPPVRLTSEYDSDSNLFFNKISCKFFD 221
            S+T+NP  +  +D    P+     S   FS P RP +R+T+E+DS+S +FF+KISCKF D
Sbjct: 3    SATRNPNYSPEVDPQPLPSTNPIHSRPIFSFPKRPALRITTEFDSESTVFFHKISCKFLD 62

Query: 222  NIGKLKLSFQNNKNGEISDPQLGFITKHLSLFYDVEEQNAFVKGCFGIGDNLTFRAAQDV 401
            ++ KLK +F NN  GEI++PQ+ F++K+LSL YD+E+ +A VK    +G  L      DV
Sbjct: 63   SLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTHDV 122

Query: 402  KAQEGEVAMVASLPNPLYKLELSSTVPSIGLPKATVRFPLGXXXXXXXXXXXXXXXXXXX 581
            KAQ+GEV MVA+L +P Y L+LS+ +PSI LPKAT +FP G                   
Sbjct: 123  KAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVKNS 182

Query: 582  XXX-GIVKGQVLNGLCTALYKDEALNLRYSYKDNDMAFIPSISLPSNLFSFAFKRRFSIS 758
                G +KGQ+L GLCTA YKD+   LRY YKD++M+F+P +SLPSN  SFAFKRRF  S
Sbjct: 183  LSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYKDDEMSFLPILSLPSNALSFAFKRRFGPS 242

Query: 759  DKLSYWYNCDSNNWSTVYKHTVSNDLKFKAGYDSEVRLGWASLWVGDEAGKAKSAPMKMK 938
            DKLSYWYNCDSN WS VYKHT   D KFKAGYDSEVRLGWASLWVGDE GKAK+APMKMK
Sbjct: 243  DKLSYWYNCDSNYWSAVYKHTYGEDFKFKAGYDSEVRLGWASLWVGDEGGKAKTAPMKMK 302

Query: 939  IQFMVQVPQDDIKSSAVMFRVKKRWDL 1019
            +QFM+QVPQDDIKSS +MFRVKKRWD+
Sbjct: 303  VQFMLQVPQDDIKSSVLMFRVKKRWDI 329


Top