BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003002
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77824.1| hypothetical protein VITISV_015457 [Vitis vinifera]   187   2e-45
emb|CBI32313.3| unnamed protein product [Vitis vinifera]              187   3e-45
ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-contain...   187   3e-45
ref|XP_004148873.1| PREDICTED: methyl-CpG-binding domain-contain...   183   4e-44
ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   183   4e-44

>emb|CAN77824.1| hypothetical protein VITISV_015457 [Vitis vinifera]
          Length = 200

 Score =  187 bits (475), Expect = 2e-45
 Identities = 92/169 (54%), Positives = 114/169 (67%), Gaps = 6/169 (3%)
 Frame = -3

Query: 723 SRAARFTNSVYAVQCEKCFKWRVIPTQEEYEIIRHRFIEDPFICEKKSDTSCEDPEDLEY 544
           S   R +   YAVQCE C KWR+I T+EEYE IR RFIE+PF+C KK+D SCEDP D+EY
Sbjct: 35  SALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSCEDPTDIEY 94

Query: 543 DNTRTWVVDKPNIPVTPDGFKRGVSVRKDFSRMDTFYTVPNGNKKVRAPAEVEKFLEENP 364
           D TRTW  DKPN+P TP GF+R + +RKDFS+MD +Y  P G KKVRA +E+  +L  NP
Sbjct: 95  DATRTWAADKPNVPKTPKGFQRDLVLRKDFSKMDAYYITPTG-KKVRALSEIAAYLSSNP 153

Query: 363 KYKEAGITVSDFNFATPKIMEDTLPA------EAGSSRKKMKVTKIEDE 235
             K+  ++ SDFNF  PKIM DT+PA          S KK K ++  DE
Sbjct: 154 DCKD--LSPSDFNFMVPKIMADTIPAHIERKVSTSGSNKKRKKSENXDE 200


>emb|CBI32313.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/163 (55%), Positives = 114/163 (69%), Gaps = 7/163 (4%)
 Frame = -3

Query: 723 SRAARFTNSVYAVQCEKCFKWRVIPTQEEYEIIRHRFIEDPFICEKKSDTSCEDPEDLEY 544
           S   R +   YAVQCE C KWR+I T+EEYE IR RFIE+PF+C KK+D SCEDP D+EY
Sbjct: 11  SALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSCEDPTDIEY 70

Query: 543 DNTRTWVVDKPNIPVTPDGFKRGVSVRKDFSRMDTFYTVPNGNKKVRAPAEVEKFLEENP 364
           D TRTW  DKPN+P TP GF+R + +RKDFS+MD +Y  P G KKVRA +E+  +L  NP
Sbjct: 71  DATRTWAADKPNVPKTPKGFQRDLVLRKDFSKMDAYYITPTG-KKVRALSEIAAYLSSNP 129

Query: 363 KYKEAGITVSDFNFATPKIMEDTLPAE-------AGSSRKKMK 256
             K+  ++ SDFNF  PKIM DT+PA        +GS++K+ K
Sbjct: 130 DCKD--LSPSDFNFMVPKIMADTIPAHIERKVSTSGSNKKRKK 170


>ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           isoform 1 [Vitis vinifera]
          Length = 179

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/163 (55%), Positives = 114/163 (69%), Gaps = 7/163 (4%)
 Frame = -3

Query: 723 SRAARFTNSVYAVQCEKCFKWRVIPTQEEYEIIRHRFIEDPFICEKKSDTSCEDPEDLEY 544
           S   R +   YAVQCE C KWR+I T+EEYE IR RFIE+PF+C KK+D SCEDP D+EY
Sbjct: 14  SALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSCEDPTDIEY 73

Query: 543 DNTRTWVVDKPNIPVTPDGFKRGVSVRKDFSRMDTFYTVPNGNKKVRAPAEVEKFLEENP 364
           D TRTW  DKPN+P TP GF+R + +RKDFS+MD +Y  P G KKVRA +E+  +L  NP
Sbjct: 74  DATRTWAADKPNVPKTPKGFQRDLVLRKDFSKMDAYYITPTG-KKVRALSEIAAYLSSNP 132

Query: 363 KYKEAGITVSDFNFATPKIMEDTLPAE-------AGSSRKKMK 256
             K+  ++ SDFNF  PKIM DT+PA        +GS++K+ K
Sbjct: 133 DCKD--LSPSDFNFMVPKIMADTIPAHIERKVSTSGSNKKRKK 173


>ref|XP_004148873.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           [Cucumis sativus] gi|449491535|ref|XP_004158929.1|
           PREDICTED: methyl-CpG-binding domain-containing protein
           4-like [Cucumis sativus]
          Length = 181

 Score =  183 bits (464), Expect = 4e-44
 Identities = 87/167 (52%), Positives = 120/167 (71%), Gaps = 6/167 (3%)
 Frame = -3

Query: 723 SRAARFTNSVYAVQCEKCFKWRVIPTQEEYEIIRHRFIEDPFICEKKSDTSCEDPEDLEY 544
           +++ R    ++A QCE+CFKWR+I TQEEYE IR + IE+PF C++K+DTSCEDP D++Y
Sbjct: 13  TKSTRLPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTSCEDPPDIDY 72

Query: 543 DNTRTWVVDKPNIPVTPDGFKRGVSVRKDFSRMDTFYTVPNGNKKVRAPAEVEKFLEENP 364
           D TRTW +DKPNIP TP+GF R + +RK+F++ D +Y  P G K VR+  EV  F+E NP
Sbjct: 73  DTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTG-KTVRSSTEVLAFVEANP 131

Query: 363 KYKEAGITVSDFNFATPKIMEDTLPAEA------GSSRKKMKVTKIE 241
           +YK+  I +S+F+FA PKIME+T+P          SS K++K TK E
Sbjct: 132 QYKD--IALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNE 176


>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  183 bits (464), Expect = 4e-44
 Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 5/154 (3%)
 Frame = -3

Query: 693 YAVQCEKCFKWRVIPTQEEYEIIRHRFIEDPFICEKKSDTSCEDPEDLEYDNTRTWVVDK 514
           YA QCEKC KWRVI T+EEYE IR + +E+PF C +K   SCEDP D+E D +RTWV+DK
Sbjct: 7   YAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWVIDK 66

Query: 513 PNIPVTPDGFKRGVSVRKDFSRMDTFYTVPNGNKKVRAPAEVEKFLEENPKYKEAGITVS 334
           P +P TP GFKR + +R+DFS+MD +Y  P G KK+R   E+  FLE NPKYK  G+++ 
Sbjct: 67  PGLPKTPGGFKRSLVLRRDFSKMDAYYITPTG-KKLRTRNEIAAFLEANPKYK--GVSIE 123

Query: 333 DFNFATPKIMEDTLP-----AEAGSSRKKMKVTK 247
           DFNF +PK+ME+T+P     A A +S KK+K +K
Sbjct: 124 DFNFTSPKVMEETVPEDVKKATASASSKKVKASK 157